Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-243
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1-292
Cow position:
Alignm length: 302
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 96

Conread position: 1-362
Cow position:
Alignm length: 387
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 267

Conread position: 1-371
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 104

Conread position: 1-387
Cow position:
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 323

Conread position: 1-394
Cow position:
Alignm length: 413
Alignm identity: 278
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 75, 50

Conread position: 1-412
Cow position:
Alignm length: 426
Alignm identity: 275
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 80

Conread position: 1-417
Cow position:
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 1-536
Cow position:
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 252

Conread position: 1-586
Cow position:
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 1-602
Cow position:
Alignm length: 627
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 197

Conread position: 1-603
Cow position:
Alignm length: 623
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 3-429
Cow position:
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 47

Conread position: 43-238
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 98

Conread position: 43-563
Cow position:
Alignm length: 537
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 46-318
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 79

Conread position: 49-329
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 30

Conread position: 49-363
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 151, 32

Conread position: 51-394
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 146, 37

Conread position: 51-590
Cow position:
Alignm length: 559
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 7

Conread position: 58-454
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 65-421
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 14

Conread position: 66-429
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 15

Conread position: 68-391
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 72-412
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 18

Conread position: 76-434
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 5

Conread position: 77-235
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 50

Conread position: 79-429
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 66

Conread position: 79-479
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 198

Conread position: 80-220
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 80-224
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 67

Conread position: 80-243
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 67

Conread position: 80-243
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 80-265
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 175

Conread position: 80-292
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 198

Conread position: 80-330
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 235

Conread position: 80-337
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 246

Conread position: 80-360
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 73

Conread position: 80-360
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 157, 113

Conread position: 80-362
Cow position:
Alignm length: 294
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 235

Conread position: 80-371
Cow position:
Alignm length: 297
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 157, 110

Conread position: 80-374
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 59

Conread position: 80-381
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 102, 237

Conread position: 80-408
Cow position:
Alignm length: 340
Alignm identity: 247
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 72

Conread position: 80-416
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 52, 70

Conread position: 80-429
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 47

Conread position: 80-463
Cow position:
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-486
Cow position:
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 142

Conread position: 80-495
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 179

Conread position: 80-497
Cow position:
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 122

Conread position: 80-498
Cow position:
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 80-557
Cow position:
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 68

Conread position: 80-561
Cow position:
Alignm length: 494
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 21

Conread position: 80-588
Cow position:
Alignm length: 524
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 80-589
Cow position:
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 238

Conread position: 80-590
Cow position:
Alignm length: 532
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 234

Conread position: 80-590
Cow position:
Alignm length: 520
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 80-602
Cow position:
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 178

Conread position: 80-602
Cow position:
Alignm length: 539
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 13

Conread position: 80-602
Cow position:
Alignm length: 529
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 47

Conread position: 80-602
Cow position:
Alignm length: 538
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-602
Cow position:
Alignm length: 536
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 47

Conread position: 81-295
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 178

Conread position: 81-308
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 102, 152

Conread position: 81-326
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 46

Conread position: 81-394
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 55

Conread position: 81-417
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 184

Conread position: 81-589
Cow position:
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 112

Conread position: 81-589
Cow position:
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 82-326
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 212

Conread position: 82-394
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 155, 44

Conread position: 83-359
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 210

Conread position: 83-394
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 170

Conread position: 83-598
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 57

Conread position: 84-308
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 99, 64

Conread position: 84-381
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 99, 230

Conread position: 85-428
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 229

Conread position: 85-602
Cow position:
Alignm length: 531
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 50

Conread position: 90-416
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 92, 131

Conread position: 90-504
Cow position:
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 175

Conread position: 90-549
Cow position:
Alignm length: 478
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 92-199
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 92-288
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 32

Conread position: 92-345
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 228

Conread position: 92-361
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 90, 7

Conread position: 92-444
Cow position:
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 92-514
Cow position:
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 221

Conread position: 92-550
Cow position:
Alignm length: 470
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 103

Conread position: 95-340
Cow position:
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 175

Conread position: 95-589
Cow position:
Alignm length: 509
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 25

Conread position: 96-412
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 211

Conread position: 96-416
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 92

Conread position: 96-601
Cow position:
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 207

Conread position: 97-281
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 97-533
Cow position:
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 231

Conread position: 100-353
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 215

Conread position: 100-376
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 27

Conread position: 100-394
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 85, 159

Conread position: 100-398
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 19

Conread position: 100-404
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 129, 91

Conread position: 100-419
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 100-426
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 183

Conread position: 100-444
Cow position:
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 84

Conread position: 100-472
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 91, 193

Conread position: 100-502
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 211

Conread position: 100-505
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 207

Conread position: 100-521
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 100-528
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 219

Conread position: 100-549
Cow position:
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 209

Conread position: 100-590
Cow position:
Alignm length: 504
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 132

Conread position: 100-602
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 89

Conread position: 100-602
Cow position:
Alignm length: 513
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 152

Conread position: 100-602
Cow position:
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 161

Conread position: 100-603
Cow position:
Alignm length: 527
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 220

Conread position: 101-394
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 170, 104

Conread position: 101-412
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 83

Conread position: 101-429
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 102-329
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 96, 29

Conread position: 102-420
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 200

Conread position: 102-539
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 215

Conread position: 104-442
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 108

Conread position: 107-362
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 209

Conread position: 114-590
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 202

Conread position: 128-603
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 136

Conread position: 141-438
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 171

Conread position: 146-556
Cow position:
Alignm length: 424
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 174

Conread position: 147-589
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 27

Conread position: 149-404
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 33

Conread position: 149-602
Cow position:
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 150-533
Cow position:
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 166

Conread position: 151-527
Cow position:
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 162

Conread position: 151-564
Cow position:
Alignm length: 416
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 36

Conread position: 152-394
Cow position:
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 108

Conread position: 186-585
Cow position:
Alignm length: 408
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 274-596
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 16

Conread position: 408-590
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 137

Show alignments to all cow chromosomes.