Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-243 |
| Cow position: | chr16:40514310-40514563 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-292 |
| Cow position: | chr16:54709870-54710169 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 1-362 |
| Cow position: | chr16:45554617-45554238 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 267 |
| Conread position: | 1-371 |
| Cow position: | chr16:14125304-14124947 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 1-387 |
| Cow position: | chr16:25839794-25839392 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 323 |
| Conread position: | 1-394 |
| Cow position: | chr16:10148450-10148049 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 75, 50 |
| Conread position: | 1-412 |
| Cow position: | chr16:48493345-48492935 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 1-417 |
| Cow position: | chr16:50873006-50873430 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 1-536 |
| Cow position: | chr16:52834718-52835248 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 252 |
| Conread position: | 1-586 |
| Cow position: | chr16:45731222-45731797 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 1-602 |
| Cow position: | chr16:52170236-52169637 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 1-603 |
| Cow position: | chr16:56231995-56231378 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 3-429 |
| Cow position: | chr16:8315031-8315441 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 43-238 |
| Cow position: | chr16:9553181-9552983 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 43-563 |
| Cow position: | chr16:48340572-48341090 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 46-318 |
| Cow position: | chr16:25387094-25386819 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 49-329 |
| Cow position: | chr16:7550082-7549797 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 49-363 |
| Cow position: | chr16:45678093-45677774 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 51-394 |
| Cow position: | chr16:56082252-56082592 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 146, 37 |
| Conread position: | 51-590 |
| Cow position: | chr16:17143046-17142500 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 58-454 |
| Cow position: | chr16:13689772-13689371 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 65-421 |
| Cow position: | chr16:16597656-16597302 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 14 |
| Conread position: | 66-429 |
| Cow position: | chr16:5363999-5363621 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 68-391 |
| Cow position: | chr16:32781462-32781133 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 72-412 |
| Cow position: | chr16:11008438-11008093 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 76-434 |
| Cow position: | chr16:29608598-29608245 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 5 |
| Conread position: | 77-235 |
| Cow position: | chr16:30305726-30305889 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 79-429 |
| Cow position: | chr16:24702938-24702584 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 79-479 |
| Cow position: | chr16:1548791-1549192 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 198 |
| Conread position: | 80-220 |
| Cow position: | chr16:21370104-21370240 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 80-224 |
| Cow position: | chr16:50370680-50370532 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 80-243 |
| Cow position: | chr16:3114625-3114455 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 80-243 |
| Cow position: | chr16:34220272-34220101 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 80-265 |
| Cow position: | chr16:45122121-45121930 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 175 |
| Conread position: | 80-292 |
| Cow position: | chr16:9905176-9904957 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 198 |
| Conread position: | 80-330 |
| Cow position: | chr16:52133431-52133687 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 235 |
| Conread position: | 80-337 |
| Cow position: | chr16:47964733-47964996 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 246 |
| Conread position: | 80-360 |
| Cow position: | chr16:10352968-10352669 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 80-360 |
| Cow position: | chr16:41697006-41697289 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 157, 113 |
| Conread position: | 80-362 |
| Cow position: | chr16:52275043-52275330 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 235 |
| Conread position: | 80-371 |
| Cow position: | chr16:41530214-41530500 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 157, 110 |
| Conread position: | 80-374 |
| Cow position: | chr16:12060502-12060201 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 80-381 |
| Cow position: | chr16:8322896-8323205 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 102, 237 |
| Conread position: | 80-408 |
| Cow position: | chr16:11806757-11806435 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 80-416 |
| Cow position: | chr16:19408442-19408768 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 80-429 |
| Cow position: | chr16:5636670-5636321 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 80-463 |
| Cow position: | chr16:27701173-27701547 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 80-486 |
| Cow position: | chr16:48956884-48956481 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 142 |
| Conread position: | 80-495 |
| Cow position: | chr16:33646101-33645686 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 179 |
| Conread position: | 80-497 |
| Cow position: | chr16:23472835-23472407 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 122 |
| Conread position: | 80-498 |
| Cow position: | chr16:11791096-11790664 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 80-557 |
| Cow position: | chr16:38708751-38709216 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 80-561 |
| Cow position: | chr16:45139752-45139268 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 80-588 |
| Cow position: | chr16:40562318-40561797 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 235 |
| Conread position: | 80-589 |
| Cow position: | chr16:11105640-11105125 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 238 |
| Conread position: | 80-590 |
| Cow position: | chr16:820336-819831 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 234 |
| Conread position: | 80-590 |
| Cow position: | chr16:39474066-39474568 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 80-602 |
| Cow position: | chr16:37669651-37670188 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 178 |
| Conread position: | 80-602 |
| Cow position: | chr16:40333240-40333764 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 80-602 |
| Cow position: | chr16:42078762-42079281 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 47 |
| Conread position: | 80-602 |
| Cow position: | chr16:46552880-46552364 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 80-602 |
| Cow position: | chr16:48369866-48370392 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 81-295 |
| Cow position: | chr16:41578311-41578087 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 101, 178 |
| Conread position: | 81-308 |
| Cow position: | chr16:12320306-12320070 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 152 |
| Conread position: | 81-326 |
| Cow position: | chr16:42345528-42345775 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 81-394 |
| Cow position: | chr16:11422385-11422078 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 92, 55 |
| Conread position: | 81-417 |
| Cow position: | chr16:26649544-26649889 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 184 |
| Conread position: | 81-589 |
| Cow position: | chr16:13990060-13989556 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 112 |
| Conread position: | 81-589 |
| Cow position: | chr16:25170478-25169965 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 82-326 |
| Cow position: | chr16:20069916-20069656 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 212 |
| Conread position: | 82-394 |
| Cow position: | chr16:8812011-8812319 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 83-359 |
| Cow position: | chr16:424730-425012 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 102, 210 |
| Conread position: | 83-394 |
| Cow position: | chr16:36203535-36203847 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 83-598 |
| Cow position: | chr16:54579249-54578736 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 57 |
| Conread position: | 84-308 |
| Cow position: | chr16:33198357-33198586 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 84-381 |
| Cow position: | chr16:42444238-42443935 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 99, 230 |
| Conread position: | 85-428 |
| Cow position: | chr16:18402768-18402429 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 229 |
| Conread position: | 85-602 |
| Cow position: | chr16:18141246-18141767 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 50 |
| Conread position: | 90-416 |
| Cow position: | chr16:11615169-11615483 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 90-504 |
| Cow position: | chr16:4626315-4626737 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 175 |
| Conread position: | 90-549 |
| Cow position: | chr16:56831665-56832136 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 92-199 |
| Cow position: | chr16:21040101-21039994 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-288 |
| Cow position: | chr16:45645614-45645817 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 92-345 |
| Cow position: | chr16:17289021-17288758 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 95, 228 |
| Conread position: | 92-361 |
| Cow position: | chr16:17627002-17626731 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 92-444 |
| Cow position: | chr16:47820641-47820288 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 92-514 |
| Cow position: | chr16:48095691-48096115 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 221 |
| Conread position: | 92-550 |
| Cow position: | chr16:9973425-9973882 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 95-340 |
| Cow position: | chr16:5836656-5836404 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 175 |
| Conread position: | 95-589 |
| Cow position: | chr16:33226468-33226961 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 96-412 |
| Cow position: | chr16:38905164-38905477 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 211 |
| Conread position: | 96-416 |
| Cow position: | chr16:13752062-13752378 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 92 |
| Conread position: | 96-601 |
| Cow position: | chr16:4059426-4058924 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 207 |
| Conread position: | 97-281 |
| Cow position: | chr16:39401945-39402123 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 97-533 |
| Cow position: | chr16:23729855-23730307 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 231 |
| Conread position: | 100-353 |
| Cow position: | chr16:54084102-54083843 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 215 |
| Conread position: | 100-376 |
| Cow position: | chr16:10592497-10592226 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 100-394 |
| Cow position: | chr16:53048618-53048319 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 85, 159 |
| Conread position: | 100-398 |
| Cow position: | chr16:15504454-15504762 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 100-404 |
| Cow position: | chr16:46175986-46176282 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 129, 91 |
| Conread position: | 100-419 |
| Cow position: | chr16:35195547-35195868 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 153 |
| Conread position: | 100-426 |
| Cow position: | chr16:17745902-17745569 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 183 |
| Conread position: | 100-444 |
| Cow position: | chr16:34168652-34168312 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 100-472 |
| Cow position: | chr16:37380336-37379959 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 91, 193 |
| Conread position: | 100-502 |
| Cow position: | chr16:16548679-16548267 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 211 |
| Conread position: | 100-505 |
| Cow position: | chr16:21450913-21450510 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 207 |
| Conread position: | 100-521 |
| Cow position: | chr16:32587270-32586842 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 167 |
| Conread position: | 100-528 |
| Cow position: | chr16:44744067-44744516 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 219 |
| Conread position: | 100-549 |
| Cow position: | chr16:4981311-4981751 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 209 |
| Conread position: | 100-590 |
| Cow position: | chr16:675556-675071 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 132 |
| Conread position: | 100-602 |
| Cow position: | chr16:3289074-3288590 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 89 |
| Conread position: | 100-602 |
| Cow position: | chr16:39646611-39646117 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 152 |
| Conread position: | 100-602 |
| Cow position: | chr16:46752205-46752722 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 161 |
| Conread position: | 100-603 |
| Cow position: | chr16:4910459-4910975 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 220 |
| Conread position: | 101-394 |
| Cow position: | chr16:39695418-39695709 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 170, 104 |
| Conread position: | 101-412 |
| Cow position: | chr16:9729260-9728953 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 101-429 |
| Cow position: | chr16:8366766-8367093 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 102-329 |
| Cow position: | chr16:22123906-22124124 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 102-420 |
| Cow position: | chr16:24023233-24023558 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 90, 200 |
| Conread position: | 102-539 |
| Cow position: | chr16:11102757-11103215 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 215 |
| Conread position: | 104-442 |
| Cow position: | chr16:14106704-14106365 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 107-362 |
| Cow position: | chr16:39238005-39237743 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 209 |
| Conread position: | 114-590 |
| Cow position: | chr16:7505141-7504676 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 202 |
| Conread position: | 128-603 |
| Cow position: | chr16:54287904-54287432 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 141-438 |
| Cow position: | chr16:39417095-39417384 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 58, 171 |
| Conread position: | 146-556 |
| Cow position: | chr16:24148181-24147763 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 147-589 |
| Cow position: | chr16:47017241-47017666 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 27 |
| Conread position: | 149-404 |
| Cow position: | chr16:8325450-8325693 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 149-602 |
| Cow position: | chr16:18679215-18678755 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 150-533 |
| Cow position: | chr16:4145082-4144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 166 |
| Conread position: | 151-527 |
| Cow position: | chr16:44973509-44973123 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 162 |
| Conread position: | 151-564 |
| Cow position: | chr16:33508068-33507663 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 36 |
| Conread position: | 152-394 |
| Cow position: | chr16:35168744-35168493 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 186-585 |
| Cow position: | chr16:49141591-49141984 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 274-596 |
| Cow position: | chr16:5345283-5345604 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 408-590 |
| Cow position: | chr16:35196080-35196262 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 159, 137 |
Show alignments to all cow chromosomes.