Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-290
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 50

Conread position: 1-326
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 96

Conread position: 1-385
Cow position:
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 40

Conread position: 1-392
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 327

Conread position: 1-393
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 271

Conread position: 1-429
Cow position:
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 326

Conread position: 1-451
Cow position:
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 52

Conread position: 1-467
Cow position:
Alignm length: 478
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 176

Conread position: 1-496
Cow position:
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 306

Conread position: 1-589
Cow position:
Alignm length: 619
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 1-602
Cow position:
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 43-332
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 19, 37

Conread position: 45-375
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 35

Conread position: 46-243
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 12, 34

Conread position: 46-416
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 49-290
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 32

Conread position: 49-549
Cow position:
Alignm length: 505
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 30

Conread position: 49-633
Cow position:
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 51-602
Cow position:
Alignm length: 567
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 28

Conread position: 56-468
Cow position:
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 9

Conread position: 60-602
Cow position:
Alignm length: 551
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 19

Conread position: 65-405
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 14

Conread position: 65-463
Cow position:
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 14

Conread position: 65-602
Cow position:
Alignm length: 559
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 66-588
Cow position:
Alignm length: 537
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 13

Conread position: 70-295
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 9

Conread position: 75-563
Cow position:
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 102

Conread position: 77-602
Cow position:
Alignm length: 536
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 191

Conread position: 79-351
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 166, 113

Conread position: 79-392
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 104

Conread position: 79-473
Cow position:
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 227

Conread position: 80-203
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 80-243
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 80-243
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 10

Conread position: 80-267
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 123, 26

Conread position: 80-276
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 178

Conread position: 80-292
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 155

Conread position: 80-309
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 80-310
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 116

Conread position: 80-338
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 147

Conread position: 80-350
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 236

Conread position: 80-357
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 60

Conread position: 80-357
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 113, 181

Conread position: 80-367
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 98, 151

Conread position: 80-367
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 99, 151

Conread position: 80-376
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 82

Conread position: 80-377
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 70

Conread position: 80-378
Cow position:
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 185

Conread position: 80-387
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 235

Conread position: 80-394
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 87, 102

Conread position: 80-421
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 182

Conread position: 80-424
Cow position:
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 80-453
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 71, 47

Conread position: 80-486
Cow position:
Alignm length: 421
Alignm identity: 288
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 39

Conread position: 80-494
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 39

Conread position: 80-495
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 80-502
Cow position:
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 106

Conread position: 80-507
Cow position:
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 241

Conread position: 80-535
Cow position:
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 183

Conread position: 80-538
Cow position:
Alignm length: 473
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 60

Conread position: 80-549
Cow position:
Alignm length: 480
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 43

Conread position: 80-589
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 60

Conread position: 80-590
Cow position:
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 60

Conread position: 80-602
Cow position:
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 113

Conread position: 80-602
Cow position:
Alignm length: 530
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 102

Conread position: 80-602
Cow position:
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 181

Conread position: 80-602
Cow position:
Alignm length: 550
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 183

Conread position: 80-604
Cow position:
Alignm length: 533
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 38

Conread position: 80-606
Cow position:
Alignm length: 536
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 94

Conread position: 80-606
Cow position:
Alignm length: 536
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 94

Conread position: 81-310
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 45

Conread position: 82-528
Cow position:
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 233

Conread position: 83-292
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 83-437
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 175

Conread position: 84-361
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 146

Conread position: 84-378
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 185

Conread position: 84-460
Cow position:
Alignm length: 387
Alignm identity: 250
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 145, 119

Conread position: 90-299
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 29

Conread position: 90-411
Cow position:
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 227

Conread position: 90-429
Cow position:
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 131

Conread position: 92-235
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 92-317
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 174

Conread position: 92-380
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 165

Conread position: 92-420
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 230

Conread position: 92-428
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 89

Conread position: 92-440
Cow position:
Alignm length: 363
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 226

Conread position: 92-561
Cow position:
Alignm length: 474
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 126

Conread position: 95-391
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 80

Conread position: 95-500
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 144

Conread position: 95-552
Cow position:
Alignm length: 471
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 138

Conread position: 95-561
Cow position:
Alignm length: 476
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 96-415
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 96-602
Cow position:
Alignm length: 522
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 218

Conread position: 97-514
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 179

Conread position: 99-355
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 20

Conread position: 100-334
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 165, 90

Conread position: 100-420
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 125

Conread position: 100-475
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 217

Conread position: 100-512
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 226

Conread position: 100-521
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 220

Conread position: 100-534
Cow position:
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 219

Conread position: 100-588
Cow position:
Alignm length: 524
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 155

Conread position: 100-602
Cow position:
Alignm length: 518
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 85

Conread position: 100-602
Cow position:
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 91

Conread position: 100-603
Cow position:
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 209

Conread position: 101-337
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 156

Conread position: 101-396
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 101-501
Cow position:
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 221

Conread position: 101-582
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 101-602
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 204

Conread position: 102-394
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 82, 130

Conread position: 120-586
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 185

Conread position: 128-300
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 167

Conread position: 128-549
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 129

Conread position: 128-562
Cow position:
Alignm length: 441
Alignm identity: 292
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 265, 65

Conread position: 141-498
Cow position:
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 50

Conread position: 146-392
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 115

Conread position: 146-602
Cow position:
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 152

Conread position: 149-497
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 72

Conread position: 150-544
Cow position:
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 118

Conread position: 151-394
Cow position:
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 40

Conread position: 152-369
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 162

Conread position: 186-583
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 120

Conread position: 195-430
Cow position:
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 260-602
Cow position:
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 27

Show alignments to all cow chromosomes.