Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-243
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 85

Conread position: 1-246
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-274
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 231

Conread position: 1-281
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 102

Conread position: 1-285
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 83

Conread position: 1-318
Cow position:
Alignm length: 328
Alignm identity: 212
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 233

Conread position: 1-393
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 15, 20

Conread position: 1-435
Cow position:
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 17

Conread position: 1-501
Cow position:
Alignm length: 524
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 268

Conread position: 1-555
Cow position:
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 1-602
Cow position:
Alignm length: 619
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 123

Conread position: 1-602
Cow position:
Alignm length: 639
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 133

Conread position: 1-613
Cow position:
Alignm length: 621
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 3-324
Cow position:
Alignm length: 331
Alignm identity: 218
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 83

Conread position: 22-411
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 159, 202

Conread position: 31-524
Cow position:
Alignm length: 512
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 37-457
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 43-344
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 19, 37

Conread position: 43-504
Cow position:
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 49-602
Cow position:
Alignm length: 565
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 65

Conread position: 51-418
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 51-532
Cow position:
Alignm length: 495
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 28

Conread position: 53-424
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 184, 26

Conread position: 54-563
Cow position:
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 25

Conread position: 65-224
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 15

Conread position: 65-394
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 70-602
Cow position:
Alignm length: 540
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 9

Conread position: 77-578
Cow position:
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 107

Conread position: 78-316
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 62

Conread position: 78-557
Cow position:
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 79-423
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 180

Conread position: 79-492
Cow position:
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 82

Conread position: 79-523
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 114

Conread position: 79-587
Cow position:
Alignm length: 520
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 79-588
Cow position:
Alignm length: 525
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 194

Conread position: 79-601
Cow position:
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 80-275
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 62

Conread position: 80-363
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 52

Conread position: 80-375
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 238

Conread position: 80-394
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 158, 68

Conread position: 80-410
Cow position:
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 35

Conread position: 80-428
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 80-442
Cow position:
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 160

Conread position: 80-454
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 186

Conread position: 80-454
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 26

Conread position: 80-458
Cow position:
Alignm length: 393
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 236

Conread position: 80-470
Cow position:
Alignm length: 399
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 234

Conread position: 80-503
Cow position:
Alignm length: 440
Alignm identity: 295
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 47

Conread position: 80-518
Cow position:
Alignm length: 456
Alignm identity: 297
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 60

Conread position: 80-525
Cow position:
Alignm length: 467
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 146

Conread position: 80-587
Cow position:
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 57

Conread position: 80-589
Cow position:
Alignm length: 530
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 113

Conread position: 80-589
Cow position:
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 217

Conread position: 80-590
Cow position:
Alignm length: 521
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 110

Conread position: 80-596
Cow position:
Alignm length: 534
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 44

Conread position: 80-602
Cow position:
Alignm length: 530
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 143

Conread position: 80-602
Cow position:
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 83

Conread position: 80-615
Cow position:
Alignm length: 549
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 238

Conread position: 81-243
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 81-304
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 111

Conread position: 82-235
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 82-497
Cow position:
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 37

Conread position: 82-603
Cow position:
Alignm length: 534
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 83-602
Cow position:
Alignm length: 530
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 85-522
Cow position:
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 42

Conread position: 90-373
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 106, 47

Conread position: 90-429
Cow position:
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 77

Conread position: 91-390
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 56

Conread position: 92-308
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 167

Conread position: 92-363
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 220

Conread position: 92-372
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 92-426
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 224

Conread position: 92-429
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 294, 48

Conread position: 92-457
Cow position:
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 158

Conread position: 92-602
Cow position:
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 222

Conread position: 92-604
Cow position:
Alignm length: 535
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 226

Conread position: 95-421
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 212

Conread position: 95-562
Cow position:
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 96-419
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 23

Conread position: 96-602
Cow position:
Alignm length: 517
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 29

Conread position: 100-411
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 100

Conread position: 100-521
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 85

Conread position: 100-522
Cow position:
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 121

Conread position: 100-590
Cow position:
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 78

Conread position: 100-602
Cow position:
Alignm length: 511
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 107

Conread position: 100-602
Cow position:
Alignm length: 520
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 101-587
Cow position:
Alignm length: 497
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 92

Conread position: 102-473
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 90

Conread position: 102-548
Cow position:
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 22

Conread position: 102-550
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 122

Conread position: 102-583
Cow position:
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 109-507
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 209

Conread position: 114-607
Cow position:
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 148

Conread position: 127-373
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 133

Conread position: 128-450
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 190

Conread position: 149-469
Cow position:
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 167

Conread position: 195-602
Cow position:
Alignm length: 416
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 260-602
Cow position:
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 51

Show alignments to all cow chromosomes.