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Cow genome map

           
Conread name:
           
Ova1-OVR010003H11
        

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:13672698-13672456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:60091253-60091528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 212
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr2:46136989-46137284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr2:17841808-17842109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 250
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr2:80865690-80866005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr2:19328714-19328365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr2:13604634-13604234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr2:15250350-15249952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr2:81348713-81349119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr2:17114559-17114975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr2:20947551-20947119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 188
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr2:75600893-75600457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 326
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr2:33553994-33554431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 280
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr2:32115245-32114742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr2:44065747-44065239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr2:85280966-85281515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr2:18997899-18997352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 188
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr2:18061466-18062021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr2:45574826-45575396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 165
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr2:58536834-58537411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr2:46222828-46223106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr2:13684871-13684448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 254
               

               
Conread position:
               
22-244
               

               
Cow position:
               
chr2:14734249-14734027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
31-424
               

               
Cow position:
               
chr2:41461504-41461100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
43-324
               

               
Cow position:
               
chr2:85794850-85795120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
43-361
               

               
Cow position:
               
chr2:1638726-1638400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
43-602
               

               
Cow position:
               
chr2:68487884-68488447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
49-367
               

               
Cow position:
               
chr2:46120526-46120841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
49-385
               

               
Cow position:
               
chr2:38362250-38362594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr2:41248686-41248308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
49-514
               

               
Cow position:
               
chr2:76110511-76110033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
51-235
               

               
Cow position:
               
chr2:994249-994439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
51-516
               

               
Cow position:
               
chr2:46227571-46227114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
53-536
               

               
Cow position:
               
chr2:64212442-64212929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
58-369
               

               
Cow position:
               
chr2:73637064-73637383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 169
               

               
Conread position:
               
60-424
               

               
Cow position:
               
chr2:39068389-39068047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
61-407
               

               
Cow position:
               
chr2:46331168-46330811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 255
               

               
Conread position:
               
65-248
               

               
Cow position:
               
chr2:44222923-44222735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
65-345
               

               
Cow position:
               
chr2:34749885-34750166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
65-598
               

               
Cow position:
               
chr2:77467351-77467894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
77-596
               

               
Cow position:
               
chr2:43609029-43609529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 106
               

               
Conread position:
               
77-604
               

               
Cow position:
               
chr2:70896123-70895577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 152
               

               
Conread position:
               
78-581
               

               
Cow position:
               
chr2:32264304-32264824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
78-601
               

               
Cow position:
               
chr2:76313780-76314291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
79-399
               

               
Cow position:
               
chr2:85926145-85925824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 219
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr2:46204603-46204262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
79-410
               

               
Cow position:
               
chr2:39489861-39489536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
75, 66
               

               
Conread position:
               
79-424
               

               
Cow position:
               
chr2:59992165-59992501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
79-429
               

               
Cow position:
               
chr2:26102854-26102513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 112
               

               
Conread position:
               
79-486
               

               
Cow position:
               
chr2:971911-971521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 161
               

               
Conread position:
               
79-587
               

               
Cow position:
               
chr2:47047670-47048177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
79-590
               

               
Cow position:
               
chr2:13369741-13369223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 138
               

               
Conread position:
               
79-602
               

               
Cow position:
               
chr2:44931175-44931695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
79-642
               

               
Cow position:
               
chr2:76562193-76561628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
80-219
               

               
Cow position:
               
chr2:44217823-44217967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 69
               

               
Conread position:
               
80-221
               

               
Cow position:
               
chr2:46162043-46161894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
80-235
               

               
Cow position:
               
chr2:50449824-50449980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
80-243
               

               
Cow position:
               
chr2:39798328-39798157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr2:58153790-58153561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
80-306
               

               
Cow position:
               
chr2:45542313-45542544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
157, 174
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr2:30144802-30144561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
80-318
               

               
Cow position:
               
chr2:46351696-46351926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
80-329
               

               
Cow position:
               
chr2:25448414-25448161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
108, 177
               

               
Conread position:
               
80-345
               

               
Cow position:
               
chr2:46343062-46343325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
80-352
               

               
Cow position:
               
chr2:1762878-1762600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr2:29121967-29121692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
80-360
               

               
Cow position:
               
chr2:39334785-39335087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
80-364
               

               
Cow position:
               
chr2:43790186-43789904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 233
               

               
Conread position:
               
80-365
               

               
Cow position:
               
chr2:71621962-71622254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
80-379
               

               
Cow position:
               
chr2:47624321-47624614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
80-394
               

               
Cow position:
               
chr2:25597409-25597721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 225
               

               
Conread position:
               
80-394
               

               
Cow position:
               
chr2:72183406-72183721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 174
               

               
Conread position:
               
80-399
               

               
Cow position:
               
chr2:75227289-75226963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 185
               

               
Conread position:
               
80-403
               

               
Cow position:
               
chr2:16428315-16428641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
80-414
               

               
Cow position:
               
chr2:992241-991920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 231
               

               
Conread position:
               
80-414
               

               
Cow position:
               
chr2:39584535-39584199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 139
               

               
Conread position:
               
80-416
               

               
Cow position:
               
chr2:19286996-19287331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 138
               

               
Conread position:
               
80-417
               

               
Cow position:
               
chr2:38747745-38747421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 166
               

               
Conread position:
               
80-421
               

               
Cow position:
               
chr2:32048566-32048229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 230
               

               
Conread position:
               
80-425
               

               
Cow position:
               
chr2:54971265-54970925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 176
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr2:15694291-15693966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 35
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr2:46189010-46189354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 180
               

               
Conread position:
               
80-429
               

               
Cow position:
               
chr2:42927365-42927718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
80-468
               

               
Cow position:
               
chr2:46033421-46033018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 236
               

               
Conread position:
               
80-484
               

               
Cow position:
               
chr2:192380-192778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
80-486
               

               
Cow position:
               
chr2:28303405-28303000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 113
               

               
Conread position:
               
80-490
               

               
Cow position:
               
chr2:38965703-38965293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
80-503
               

               
Cow position:
               
chr2:45784825-45784395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 244
               

               
Conread position:
               
80-517
               

               
Cow position:
               
chr2:44168151-44167711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
80-522
               

               
Cow position:
               
chr2:52344837-52344402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
80-529
               

               
Cow position:
               
chr2:45478511-45478959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
80-535
               

               
Cow position:
               
chr2:13001882-13001442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
80-536
               

               
Cow position:
               
chr2:40402941-40403388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 165
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr2:45499116-45499582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 184
               

               
Conread position:
               
80-566
               

               
Cow position:
               
chr2:46293960-46294438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 110
               

               
Conread position:
               
80-577
               

               
Cow position:
               
chr2:70704344-70703844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 236
               

               
Conread position:
               
80-588
               

               
Cow position:
               
chr2:59952773-59953281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 132
               

               
Conread position:
               
80-590
               

               
Cow position:
               
chr2:35948594-35949113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
80-590
               

               
Cow position:
               
chr2:44191566-44191050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 173
               

               
Conread position:
               
80-598
               

               
Cow position:
               
chr2:549244-549756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr2:9173186-9173708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 180
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr2:19494300-19493763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 241
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr2:36055713-36056239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 183
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr2:43624447-43624968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr2:69419499-69420016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
80-605
               

               
Cow position:
               
chr2:53532726-53533250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 163
               

               
Conread position:
               
81-394
               

               
Cow position:
               
chr2:11599507-11599209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 46
               

               
Conread position:
               
81-561
               

               
Cow position:
               
chr2:54654530-54655022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
81-602
               

               
Cow position:
               
chr2:69223135-69223673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
82-602
               

               
Cow position:
               
chr2:6539154-6539679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 231
               

               
Conread position:
               
82-602
               

               
Cow position:
               
chr2:39941559-39941054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 81
               

               
Conread position:
               
83-224
               

               
Cow position:
               
chr2:40466718-40466571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr2:7573422-7573651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
83-388
               

               
Cow position:
               
chr2:6160260-6160552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
83-403
               

               
Cow position:
               
chr2:66480103-66480419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 222
               

               
Conread position:
               
83-553
               

               
Cow position:
               
chr2:42255518-42255044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 213
               

               
Conread position:
               
83-604
               

               
Cow position:
               
chr2:7524049-7524580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 235
               

               
Conread position:
               
84-387
               

               
Cow position:
               
chr2:15597397-15597694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
84-590
               

               
Cow position:
               
chr2:38658705-38659207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
85-425
               

               
Cow position:
               
chr2:41954967-41954616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
97, 250
               

               
Conread position:
               
90-292
               

               
Cow position:
               
chr2:17805687-17805898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
90-411
               

               
Cow position:
               
chr2:49467705-49467370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 208
               

               
Conread position:
               
90-425
               

               
Cow position:
               
chr2:82957754-82957412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
101, 211
               

               
Conread position:
               
90-508
               

               
Cow position:
               
chr2:39566618-39567021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
90-514
               

               
Cow position:
               
chr2:80324771-80325199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 212
               

               
Conread position:
               
90-596
               

               
Cow position:
               
chr2:1352048-1352545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
90-596
               

               
Cow position:
               
chr2:4254459-4254980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr2:46130086-46130310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr2:40488880-40488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
92-373
               

               
Cow position:
               
chr2:44051382-44051093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
92-386
               

               
Cow position:
               
chr2:19597870-19597570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
92-387
               

               
Cow position:
               
chr2:46374869-46375154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
92-397
               

               
Cow position:
               
chr2:77212108-77212415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
92-404
               

               
Cow position:
               
chr2:74249154-74249469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 207
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr2:53851510-53851185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
92-417
               

               
Cow position:
               
chr2:21003248-21002932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 166
               

               
Conread position:
               
92-424
               

               
Cow position:
               
chr2:42183446-42183109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
92-429
               

               
Cow position:
               
chr2:79884-80226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 215
               

               
Conread position:
               
92-429
               

               
Cow position:
               
chr2:24434206-24434552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
92-441
               

               
Cow position:
               
chr2:42608140-42607792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 221
               

               
Conread position:
               
92-456
               

               
Cow position:
               
chr2:45535540-45535176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
97, 180
               

               
Conread position:
               
92-561
               

               
Cow position:
               
chr2:17444872-17444380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 225
               

               
Conread position:
               
92-585
               

               
Cow position:
               
chr2:53650098-53649613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 152
               

               
Conread position:
               
92-588
               

               
Cow position:
               
chr2:44170633-44170131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
92-589
               

               
Cow position:
               
chr2:77157273-77157782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
92-589
               

               
Cow position:
               
chr2:85250409-85249922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
92-591
               

               
Cow position:
               
chr2:14089867-14089349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 234
               

               
Conread position:
               
92-602
               

               
Cow position:
               
chr2:39815209-39815720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 216
               

               
Conread position:
               
92-602
               

               
Cow position:
               
chr2:45912558-45913077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 218
               

               
Conread position:
               
92-602
               

               
Cow position:
               
chr2:46202336-46201847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 101
               

               
Conread position:
               
95-353
               

               
Cow position:
               
chr2:63331733-63332003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 222
               

               
Conread position:
               
95-416
               

               
Cow position:
               
chr2:45666104-45665779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 223
               

               
Conread position:
               
95-417
               

               
Cow position:
               
chr2:36436278-36435946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
86, 220
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr2:46262511-46262186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
96-540
               

               
Cow position:
               
chr2:52171326-52170893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
97-604
               

               
Cow position:
               
chr2:47645115-47644620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
99-383
               

               
Cow position:
               
chr2:61136799-61136509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
100-383
               

               
Cow position:
               
chr2:41145381-41145090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
100-412
               

               
Cow position:
               
chr2:16839702-16839383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
92, 202
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chr2:13354742-13354413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 214
               

               
Conread position:
               
100-429
               

               
Cow position:
               
chr2:16071336-16071664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
155, 90
               

               
Conread position:
               
100-433
               

               
Cow position:
               
chr2:70539306-70539647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
91, 221
               

               
Conread position:
               
100-561
               

               
Cow position:
               
chr2:38273616-38273140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 217
               

               
Conread position:
               
100-589
               

               
Cow position:
               
chr2:28820430-28819936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 212
               

               
Conread position:
               
100-601
               

               
Cow position:
               
chr2:6039079-6038576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
100-601
               

               
Cow position:
               
chr2:14826342-14825843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 104
               

               
Conread position:
               
100-602
               

               
Cow position:
               
chr2:72528026-72527513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 204
               

               
Conread position:
               
101-292
               

               
Cow position:
               
chr2:47147974-47147774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr2:31529552-31529272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
272, 44
               

               
Conread position:
               
102-394
               

               
Cow position:
               
chr2:50565998-50565695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 222
               

               
Conread position:
               
103-602
               

               
Cow position:
               
chr2:71800021-71800532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 212
               

               
Conread position:
               
104-537
               

               
Cow position:
               
chr2:58074282-58074723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 155
               

               
Conread position:
               
106-589
               

               
Cow position:
               
chr2:34695305-34694809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
109-603
               

               
Cow position:
               
chr2:11806376-11805876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 201
               

               
Conread position:
               
113-518
               

               
Cow position:
               
chr2:24007476-24007081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
128-417
               

               
Cow position:
               
chr2:6281983-6282265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
128-586
               

               
Cow position:
               
chr2:23847787-23848230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
146-596
               

               
Cow position:
               
chr2:38628929-38628480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
149-334
               

               
Cow position:
               
chr2:21078599-21078404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
149-394
               

               
Cow position:
               
chr2:68716651-68716900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
149-414
               

               
Cow position:
               
chr2:43577780-43578049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
39, 164
               

               
Conread position:
               
149-588
               

               
Cow position:
               
chr2:39052001-39051557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
151-419
               

               
Cow position:
               
chr2:1658512-1658242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
155-596
               

               
Cow position:
               
chr2:39597308-39596862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
183-599
               

               
Cow position:
               
chr2:70525504-70525080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
183-602
               

               
Cow position:
               
chr2:43596195-43596610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
191-513
               

               
Cow position:
               
chr2:35359762-35359437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
203, 50
               

               
Conread position:
               
420-586
               

               
Cow position:
               
chr2:20947090-20946924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
146, 99
               
Show alignments to all cow chromosomes.