Cow genome map
Conread name: | Ova1-OVR010003H11 |
Conread position: | 1-292 |
Cow position: | chr20:22265042-22265338 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 194 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 51, 182 |
Conread position: | 1-303 |
Cow position: | chr20:35710384-35710067 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 207 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 55, 237 |
Conread position: | 1-587 |
Cow position: | chr20:14807108-14806501 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 336 |
Conread position: | 1-587 |
Cow position: | chr20:19363162-19363746 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 27 |
Conread position: | 2-391 |
Cow position: | chr20:34108313-34107930 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 254 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 50, 119 |
Conread position: | 3-571 |
Cow position: | chr20:33532513-33531941 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 69 |
Conread position: | 5-360 |
Cow position: | chr20:8308225-8307858 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 253 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 34, 47 |
Conread position: | 46-375 |
Cow position: | chr20:3255198-3254878 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 35 |
Conread position: | 46-495 |
Cow position: | chr20:12581794-12582238 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 33 |
Conread position: | 48-310 |
Cow position: | chr20:39266800-39267070 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 129, 31 |
Conread position: | 49-424 |
Cow position: | chr20:12420462-12420841 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 32 |
Conread position: | 60-394 |
Cow position: | chr20:11542142-11542472 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 10 |
Conread position: | 65-224 |
Cow position: | chr20:15530001-15529847 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 79-464 |
Cow position: | chr20:5950514-5950889 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 265 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 46, 40 |
Conread position: | 79-553 |
Cow position: | chr20:21372437-21371950 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 37 |
Conread position: | 79-583 |
Cow position: | chr20:18320665-18321175 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 48 |
Conread position: | 80-320 |
Cow position: | chr20:32463396-32463640 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 116, 60 |
Conread position: | 80-354 |
Cow position: | chr20:28441455-28441177 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 116, 233 |
Conread position: | 80-373 |
Cow position: | chr20:7438723-7439017 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 212 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 115, 218 |
Conread position: | 80-378 |
Cow position: | chr20:16935187-16935476 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 39 |
Conread position: | 80-393 |
Cow position: | chr20:36207942-36207614 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 211 |
Conread position: | 80-394 |
Cow position: | chr20:6603169-6602852 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 80-394 |
Cow position: | chr20:12239555-12239869 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 236 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 89, 47 |
Conread position: | 80-423 |
Cow position: | chr20:38768335-38768672 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 55 |
Conread position: | 80-426 |
Cow position: | chr20:26996657-26996312 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 7 |
Conread position: | 80-429 |
Cow position: | chr20:5827068-5826712 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 235 |
Conread position: | 80-443 |
Cow position: | chr20:10200474-10200102 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 11 |
Conread position: | 80-465 |
Cow position: | chr20:22065194-22064812 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 59 |
Conread position: | 80-494 |
Cow position: | chr20:7426069-7426479 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 111 |
Conread position: | 80-505 |
Cow position: | chr20:13752353-13751945 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 105 |
Conread position: | 80-551 |
Cow position: | chr20:20203346-20202869 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 180 |
Conread position: | 80-551 |
Cow position: | chr20:24069934-24069468 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 238 |
Conread position: | 80-557 |
Cow position: | chr20:40177373-40176900 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 133 |
Conread position: | 80-588 |
Cow position: | chr20:28605337-28604829 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 54 |
Conread position: | 80-594 |
Cow position: | chr20:5702852-5702356 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 113 |
Conread position: | 80-598 |
Cow position: | chr20:34596969-34597521 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 368 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 47, 39 |
Conread position: | 80-602 |
Cow position: | chr20:398178-398689 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 142 |
Conread position: | 80-602 |
Cow position: | chr20:32847473-32846953 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 138 |
Conread position: | 80-602 |
Cow position: | chr20:33363646-33363115 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 228 |
Conread position: | 81-454 |
Cow position: | chr20:22235439-22235062 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 155 |
Conread position: | 81-455 |
Cow position: | chr20:3606834-3607202 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 49 |
Conread position: | 81-553 |
Cow position: | chr20:2819670-2819218 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 93 |
Conread position: | 81-561 |
Cow position: | chr20:28982827-28982345 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 39 |
Conread position: | 82-485 |
Cow position: | chr20:41028615-41028210 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 275 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 73, 65 |
Conread position: | 82-573 |
Cow position: | chr20:19459539-19460011 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 173 |
Conread position: | 83-407 |
Cow position: | chr20:15565704-15566034 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 231 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 108, 27 |
Conread position: | 83-424 |
Cow position: | chr20:34777305-34776966 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 168 |
Conread position: | 83-602 |
Cow position: | chr20:580795-581321 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 194 |
Conread position: | 84-602 |
Cow position: | chr20:29845175-29844643 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 218 |
Conread position: | 85-439 |
Cow position: | chr20:15548773-15549136 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 256 |
Conread position: | 85-602 |
Cow position: | chr20:36779606-36780135 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 34 |
Conread position: | 90-418 |
Cow position: | chr20:11482016-11482353 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 240 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 38, 29 |
Conread position: | 90-589 |
Cow position: | chr20:7806451-7806949 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 100 |
Conread position: | 92-292 |
Cow position: | chr20:7738115-7738319 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 92-299 |
Cow position: | chr20:18379494-18379282 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 109, 16 |
Conread position: | 92-326 |
Cow position: | chr20:35407967-35407738 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 48, 57 |
Conread position: | 92-429 |
Cow position: | chr20:4206088-4205738 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 229 |
Conread position: | 92-502 |
Cow position: | chr20:6240405-6240827 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 14 |
Conread position: | 92-536 |
Cow position: | chr20:9412605-9412164 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 130 |
Conread position: | 92-536 |
Cow position: | chr20:31740103-31740544 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 183 |
Conread position: | 95-423 |
Cow position: | chr20:14879902-14879567 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 238 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 85, 185 |
Conread position: | 95-424 |
Cow position: | chr20:42458743-42459071 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 226 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 134, 83 |
Conread position: | 96-513 |
Cow position: | chr20:5998559-5998984 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 96-602 |
Cow position: | chr20:23792716-23792202 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 82 |
Conread position: | 97-451 |
Cow position: | chr20:39518118-39517765 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 53 |
Conread position: | 97-469 |
Cow position: | chr20:8702806-8703174 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 51 |
Conread position: | 100-355 |
Cow position: | chr20:36010904-36010639 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 91, 219 |
Conread position: | 100-379 |
Cow position: | chr20:2204577-2204839 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 144, 65 |
Conread position: | 100-405 |
Cow position: | chr20:3141682-3141385 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 216 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 83, 109 |
Conread position: | 100-408 |
Cow position: | chr20:39325499-39325181 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 221 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 91, 210 |
Conread position: | 100-435 |
Cow position: | chr20:35176669-35177004 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 14, 10 |
Conread position: | 100-516 |
Cow position: | chr20:39398589-39398168 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 198 |
Conread position: | 105-424 |
Cow position: | chr20:23505931-23505609 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 186 |
Conread position: | 107-429 |
Cow position: | chr20:39019797-39019471 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 153 |
Conread position: | 128-428 |
Cow position: | chr20:22704375-22704064 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 191 |
Conread position: | 148-392 |
Cow position: | chr20:18423761-18423534 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 152-549 |
Cow position: | chr20:38818063-38817671 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 162 |
Conread position: | 175-700 |
Cow position: | chr20:14012002-14011487 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 112 |
Conread position: | 189-422 |
Cow position: | chr20:18618650-18618421 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 7, 122 |
Conread position: | 216-602 |
Cow position: | chr20:13790291-13789912 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Show alignments to all cow chromosomes.