Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-224
Cow position: chr23:13202186-13202423 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 29

Conread position: 1-248
Cow position: chr23:24685425-24685166 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 203

Conread position: 1-298
Cow position: chr23:1438463-1438157 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 64

Conread position: 1-394
Cow position: chr23:10416243-10416653 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 268
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 226

Conread position: 1-418
Cow position: chr23:21452547-21452988 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 162

Conread position: 1-429
Cow position: chr23:8063713-8063287 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 83

Conread position: 1-429
Cow position: chr23:15286966-15287400 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 241

Conread position: 1-583
Cow position: chr23:18322263-18322841 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 3-233
Cow position: chr23:16961469-16961225 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 3-311
Cow position: chr23:24984008-24984323 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 48

Conread position: 3-378
Cow position: chr23:18901883-18902265 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 3-418
Cow position: chr23:16880987-16881412 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 311

Conread position: 3-531
Cow position: chr23:24509867-24509335 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 43-418
Cow position: chr23:11314910-11315272 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 46-416
Cow position: chr23:29034435-29034060 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 43

Conread position: 53-602
Cow position: chr23:26841535-26841003 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 27

Conread position: 65-562
Cow position: chr23:3394395-3394904 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 65-603
Cow position: chr23:7845394-7844848 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 14

Conread position: 76-230
Cow position: chr23:22586971-22586821 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 78-420
Cow position: chr23:16582820-16583166 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 13

Conread position: 79-426
Cow position: chr23:8293590-8293238 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 95

Conread position: 79-433
Cow position: chr23:187267-186901 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 80-222
Cow position: chr23:35368958-35369105 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 80-224
Cow position: chr23:24966375-24966526 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 80-229
Cow position: chr23:1981574-1981721 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 51

Conread position: 80-286
Cow position: chr23:16076077-16076287 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 15

Conread position: 80-291
Cow position: chr23:5732638-5732417 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 107, 54

Conread position: 80-301
Cow position: chr23:12363530-12363761 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 124, 179

Conread position: 80-311
Cow position: chr23:21502543-21502790 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 80-328
Cow position: chr23:7361195-7360950 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 103

Conread position: 80-333
Cow position: chr23:3282034-3282289 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 159

Conread position: 80-358
Cow position: chr23:19370987-19371265 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 109, 199

Conread position: 80-360
Cow position: chr23:5426521-5426231 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 187

Conread position: 80-394
Cow position: chr23:5603197-5603501 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 39

Conread position: 80-394
Cow position: chr23:5707081-5706770 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 166

Conread position: 80-400
Cow position: chr23:27544915-27544595 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 39

Conread position: 80-411
Cow position: chr23:18402202-18402534 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 231

Conread position: 80-413
Cow position: chr23:4562973-4562638 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 111, 234

Conread position: 80-417
Cow position: chr23:2282094-2282428 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 59

Conread position: 80-424
Cow position: chr23:17404926-17404591 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 110, 10

Conread position: 80-429
Cow position: chr23:11045574-11045216 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 49

Conread position: 80-464
Cow position: chr23:1883483-1883092 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 158

Conread position: 80-467
Cow position: chr23:29459011-29459398 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 110

Conread position: 80-502
Cow position: chr23:39778489-39778077 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 158

Conread position: 80-503
Cow position: chr23:37065937-37065501 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 185

Conread position: 80-538
Cow position: chr23:353518-353953 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 70

Conread position: 80-540
Cow position: chr23:16699954-16700396 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 234

Conread position: 80-577
Cow position: chr23:2501766-2502279 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 151

Conread position: 80-588
Cow position: chr23:11473416-11473932 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 80-596
Cow position: chr23:534315-533791 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 79

Conread position: 80-601
Cow position: chr23:39806957-39806424 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 47

Conread position: 80-602
Cow position: chr23:9268667-9268148 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 39

Conread position: 80-607
Cow position: chr23:26986184-26986730 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 81-454
Cow position: chr23:1690860-1690497 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 51

Conread position: 82-603
Cow position: chr23:8698506-8698004 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 106

Conread position: 83-318
Cow position: chr23:19774853-19774614 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 36

Conread position: 83-609
Cow position: chr23:10553924-10554461 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 230

Conread position: 84-267
Cow position: chr23:1222153-1222348 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 35

Conread position: 85-403
Cow position: chr23:40891445-40891122 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 34

Conread position: 90-318
Cow position: chr23:18286270-18286039 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 157

Conread position: 90-476
Cow position: chr23:2799658-2799255 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 221

Conread position: 91-224
Cow position: chr23:5400745-5400604 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 91-292
Cow position: chr23:1634758-1634551 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 44

Conread position: 91-329
Cow position: chr23:1767905-1767661 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 203

Conread position: 92-292
Cow position: chr23:35938421-35938208 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 92-419
Cow position: chr23:6244521-6244843 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 45

Conread position: 92-473
Cow position: chr23:16563914-16563533 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 164

Conread position: 92-613
Cow position: chr23:11129310-11128782 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 154

Conread position: 93-401
Cow position: chr23:6367685-6367368 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 225

Conread position: 95-318
Cow position: chr23:4329602-4329839 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 223

Conread position: 95-602
Cow position: chr23:1290370-1289861 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 165

Conread position: 96-383
Cow position: chr23:1490112-1489837 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 90

Conread position: 96-532
Cow position: chr23:38455107-38455553 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 99-369
Cow position: chr23:24930003-24930278 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 92, 139

Conread position: 100-364
Cow position: chr23:36018218-36017942 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 218

Conread position: 100-366
Cow position: chr23:20248627-20248902 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 215

Conread position: 100-367
Cow position: chr23:30936516-30936792 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 94

Conread position: 100-403
Cow position: chr23:29521540-29521230 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 211

Conread position: 100-601
Cow position: chr23:18802202-18802714 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 220

Conread position: 101-376
Cow position: chr23:21764989-21764705 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 215

Conread position: 101-392
Cow position: chr23:24704351-24704051 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 18

Conread position: 102-561
Cow position: chr23:41472687-41472217 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 219

Conread position: 103-282
Cow position: chr23:5795542-5795354 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 37

Conread position: 128-373
Cow position: chr23:1776594-1776840 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 184

Conread position: 148-602
Cow position: chr23:41285939-41285498 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 97

Conread position: 152-418
Cow position: chr23:809180-808907 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 161

Conread position: 324-589
Cow position: chr23:20001915-20001650 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 220

Show alignments to all cow chromosomes.