Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 203
               

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               54, 226
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 241
               

               Conread position:
               1-583
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               3-418
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 311
               

               Conread position:
               3-531
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 138
               

               Conread position:
               43-418
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               46-416
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               53-602
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               65-562
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               65-603
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               76-230
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               78-420
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               79-426
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               79-433
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               80-222
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               80-224
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               80-229
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               80-286
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               80-291
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               107, 54
               

               Conread position:
               80-301
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               124, 179
               

               Conread position:
               80-311
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               80-328
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               80-333
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 159
               

               Conread position:
               80-358
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               109, 199
               

               Conread position:
               80-360
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 187
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 166
               

               Conread position:
               80-400
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               80-411
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 231
               

               Conread position:
               80-413
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 234
               

               Conread position:
               80-417
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               80-424
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               80-429
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               80-464
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 158
               

               Conread position:
               80-467
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 110
               

               Conread position:
               80-502
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 158
               

               Conread position:
               80-503
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 185
               

               Conread position:
               80-538
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               80-540
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 234
               

               Conread position:
               80-577
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 151
               

               Conread position:
               80-588
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               80-596
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 79
               

               Conread position:
               80-601
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 39
               

               Conread position:
               80-607
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 33
               

               Conread position:
               81-454
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               82-603
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 106
               

               Conread position:
               83-318
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               83-609
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 230
               

               Conread position:
               84-267
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               85-403
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               90-318
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               92, 157
               

               Conread position:
               90-476
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 221
               

               Conread position:
               91-224
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               91-292
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               91-329
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 203
               

               Conread position:
               92-292
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               92-419
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 45
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 164
               

               Conread position:
               92-613
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               93-401
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 225
               

               Conread position:
               95-318
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               95, 223
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 165
               

               Conread position:
               96-383
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 90
               

               Conread position:
               96-532
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               99-369
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               92, 139
               

               Conread position:
               100-364
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 218
               

               Conread position:
               100-366
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               94, 215
               

               Conread position:
               100-367
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               133, 94
               

               Conread position:
               100-403
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               91, 211
               

               Conread position:
               100-601
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 220
               

               Conread position:
               101-376
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 215
               

               Conread position:
               101-392
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               102-561
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 219
               

               Conread position:
               103-282
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 184
               

               Conread position:
               148-602
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               152-418
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               324-589
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 220
               
Show alignments to all cow chromosomes.