Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 289
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 233
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 324
               

               Conread position:
               1-504
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 141
               

               Conread position:
               1-524
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               1-561
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               1-561
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 223
               

               Conread position:
               3-500
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               38-363
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               43-418
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               158, 37
               

               Conread position:
               50-235
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 31
               

               Conread position:
               62-556
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               65-418
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 15
               

               Conread position:
               65-426
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               65-606
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 15
               

               Conread position:
               68-341
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               77-306
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 176
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               79-364
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 219
               

               Conread position:
               79-394
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               79-461
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               80-351
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               80-381
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               107, 229
               

               Conread position:
               80-413
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               80-475
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               80-516
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 65
               

               Conread position:
               80-562
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               80-566
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 169
               

               Conread position:
               80-583
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 145
               

               Conread position:
               80-590
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               80-606
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               81-425
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 180
               

               Conread position:
               81-589
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               81-602
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 152
               

               Conread position:
               82-331
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               107, 236
               

               Conread position:
               89-561
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               90-558
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 132
               

               Conread position:
               90-602
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 117
               

               Conread position:
               91-426
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 163
               

               Conread position:
               92-361
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 219
               

               Conread position:
               92-485
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 48
               

               Conread position:
               92-586
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 228
               

               Conread position:
               92-589
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 168
               

               Conread position:
               92-602
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 88
               

               Conread position:
               92-606
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 153
               

               Conread position:
               95-444
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               95-515
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 173
               

               Conread position:
               96-609
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 226
               

               Conread position:
               98-602
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 92
               

               Conread position:
               100-353
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 218
               

               Conread position:
               100-369
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 212
               

               Conread position:
               100-389
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 216
               

               Conread position:
               100-441
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               97, 224
               

               Conread position:
               100-579
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 226
               

               Conread position:
               100-583
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 89
               

               Conread position:
               100-602
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 215
               

               Conread position:
               101-419
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               89, 214
               

               Conread position:
               101-542
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               107-388
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               110-602
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 129
               

               Conread position:
               129-357
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               132-451
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               149-305
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               430-598
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               125, 42
               
Show alignments to all cow chromosomes.