Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-230 |
| Cow position: | chr24:37823682-37823434 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 1-308 |
| Cow position: | chr24:37038049-37037723 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 289 |
| Conread position: | 1-414 |
| Cow position: | chr24:30313871-30314313 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 233 |
| Conread position: | 1-424 |
| Cow position: | chr24:23694753-23695182 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 1-426 |
| Cow position: | chr24:27607953-27608383 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 324 |
| Conread position: | 1-504 |
| Cow position: | chr24:39849734-39850244 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 1-524 |
| Cow position: | chr24:15057542-15057008 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 1-561 |
| Cow position: | chr24:212128-211557 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 1-561 |
| Cow position: | chr24:35675689-35675135 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 223 |
| Conread position: | 3-500 |
| Cow position: | chr24:24490869-24491373 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 48 |
| Conread position: | 38-363 |
| Cow position: | chr24:22225288-22224952 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 43-418 |
| Cow position: | chr24:34761990-34761615 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 158, 37 |
| Conread position: | 50-235 |
| Cow position: | chr24:39791630-39791440 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 62-556 |
| Cow position: | chr24:2402291-2402794 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 65-418 |
| Cow position: | chr24:1269857-1269523 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 15 |
| Conread position: | 65-426 |
| Cow position: | chr24:31816652-31816296 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 65-606 |
| Cow position: | chr24:27844454-27844994 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 15 |
| Conread position: | 68-341 |
| Cow position: | chr24:6131798-6132080 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 77-306 |
| Cow position: | chr24:19736270-19736502 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 176 |
| Conread position: | 78-482 |
| Cow position: | chr24:34272873-34272457 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 79-364 |
| Cow position: | chr24:22689514-22689812 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 72, 219 |
| Conread position: | 79-394 |
| Cow position: | chr24:43927271-43927577 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 79-461 |
| Cow position: | chr24:26928882-26929273 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 80-351 |
| Cow position: | chr24:28990622-28990351 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 80-381 |
| Cow position: | chr24:24457189-24457491 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 229 |
| Conread position: | 80-413 |
| Cow position: | chr24:19769550-19769222 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 80-475 |
| Cow position: | chr24:28319148-28319544 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 80-516 |
| Cow position: | chr24:33153837-33153409 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 80-562 |
| Cow position: | chr24:30235931-30235455 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 80-566 |
| Cow position: | chr24:3493945-3493467 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 169 |
| Conread position: | 80-583 |
| Cow position: | chr24:15246582-15247073 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 145 |
| Conread position: | 80-590 |
| Cow position: | chr24:201576-202088 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 80-602 |
| Cow position: | chr24:24250783-24250257 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 80-606 |
| Cow position: | chr24:33944462-33943928 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 81-425 |
| Cow position: | chr24:27725952-27726292 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 101, 180 |
| Conread position: | 81-589 |
| Cow position: | chr24:11887217-11886710 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 81-602 |
| Cow position: | chr24:31812249-31811721 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 152 |
| Conread position: | 82-331 |
| Cow position: | chr24:30897477-30897735 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 107, 236 |
| Conread position: | 89-561 |
| Cow position: | chr24:29180938-29180477 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 90-558 |
| Cow position: | chr24:28496531-28497009 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 132 |
| Conread position: | 90-602 |
| Cow position: | chr24:5141993-5141465 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 91-426 |
| Cow position: | chr24:17860208-17860540 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 163 |
| Conread position: | 92-361 |
| Cow position: | chr24:31359370-31359099 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 219 |
| Conread position: | 92-485 |
| Cow position: | chr24:43028281-43028680 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 92-586 |
| Cow position: | chr24:31324334-31323837 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 228 |
| Conread position: | 92-589 |
| Cow position: | chr24:17104521-17105017 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 168 |
| Conread position: | 92-602 |
| Cow position: | chr24:11119326-11118820 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 88 |
| Conread position: | 92-606 |
| Cow position: | chr24:6150072-6149563 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 153 |
| Conread position: | 95-444 |
| Cow position: | chr24:25885113-25885464 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 95-515 |
| Cow position: | chr24:37650720-37650301 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 173 |
| Conread position: | 96-609 |
| Cow position: | chr24:11840232-11839703 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 226 |
| Conread position: | 98-602 |
| Cow position: | chr24:18374811-18374326 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 92 |
| Conread position: | 100-353 |
| Cow position: | chr24:5632990-5633252 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 218 |
| Conread position: | 100-369 |
| Cow position: | chr24:20249855-20250135 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 212 |
| Conread position: | 100-389 |
| Cow position: | chr24:39143653-39143353 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 216 |
| Conread position: | 100-441 |
| Cow position: | chr24:42344956-42345312 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 97, 224 |
| Conread position: | 100-579 |
| Cow position: | chr24:19465876-19466377 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 226 |
| Conread position: | 100-583 |
| Cow position: | chr24:2392227-2391743 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 89 |
| Conread position: | 100-602 |
| Cow position: | chr24:29595768-29596273 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 215 |
| Conread position: | 101-419 |
| Cow position: | chr24:7914046-7913716 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 214 |
| Conread position: | 101-542 |
| Cow position: | chr24:44870047-44869597 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 107-388 |
| Cow position: | chr24:6487950-6487670 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 110-602 |
| Cow position: | chr24:28303334-28303817 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 129 |
| Conread position: | 129-357 |
| Cow position: | chr24:39833503-39833735 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 132-451 |
| Cow position: | chr24:30178250-30177922 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 188 |
| Conread position: | 149-305 |
| Cow position: | chr24:17492292-17492142 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 430-598 |
| Cow position: | chr24:25424712-25424544 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 42 |
Show alignments to all cow chromosomes.