Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               64, 195
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               50, 249
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               1-412
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 50
               

               Conread position:
               1-549
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               1-589
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               33-602
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               49-287
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               58-416
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 21
               

               Conread position:
               61-602
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               61-602
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               65-366
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               65-509
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               65-602
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               65-633
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               77-603
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               79-243
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               80-265
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               80-271
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               80-279
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               112, 152
               

               Conread position:
               80-296
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 194
               

               Conread position:
               80-301
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               80-304
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               80-308
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               80-319
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               111, 234
               

               Conread position:
               80-329
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 241
               

               Conread position:
               80-362
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               80-376
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               156, 44
               

               Conread position:
               80-390
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               105, 214
               

               Conread position:
               80-424
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 239
               

               Conread position:
               80-428
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 102
               

               Conread position:
               80-461
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 152
               

               Conread position:
               80-466
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               80-475
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 94
               

               Conread position:
               80-490
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 150
               

               Conread position:
               80-526
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 178
               

               Conread position:
               80-534
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 153
               

               Conread position:
               80-538
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               80-546
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 235
               

               Conread position:
               80-580
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               80-589
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 89
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               81-366
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               81-603
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 233
               

               Conread position:
               84-429
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               88-417
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 94
               

               Conread position:
               90-427
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 222
               

               Conread position:
               90-596
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 209
               

               Conread position:
               92-328
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               95-394
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 228
               

               Conread position:
               96-289
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               96-396
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               96-602
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 34
               

               Conread position:
               97-428
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 160
               

               Conread position:
               99-345
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 86
               

               Conread position:
               100-390
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               97, 214
               

               Conread position:
               100-428
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               84, 135
               

               Conread position:
               100-443
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               91, 228
               

               Conread position:
               100-515
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 212
               

               Conread position:
               100-525
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 216
               

               Conread position:
               100-538
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               100-590
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 153
               

               Conread position:
               100-601
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 175
               

               Conread position:
               100-602
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 113
               

               Conread position:
               101-292
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               101-490
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               102-224
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               104-305
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               122-598
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               127-375
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 180
               

               Conread position:
               132-586
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               151-408
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               152-602
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 111
               

               Conread position:
               187-379
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               195-601
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 58
               
Show alignments to all cow chromosomes.