Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-265 |
| Cow position: | chr26:14481368-14481640 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 249 |
| Conread position: | 1-418 |
| Cow position: | chr26:35704572-35704145 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 257 |
| Conread position: | 1-430 |
| Cow position: | chr26:32897681-32898123 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 272 |
| Conread position: | 1-529 |
| Cow position: | chr26:20291494-20292033 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 246 |
| Conread position: | 49-574 |
| Cow position: | chr26:14951011-14951546 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 53-598 |
| Cow position: | chr26:9492052-9491520 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 58-594 |
| Cow position: | chr26:29576488-29575972 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 129 |
| Conread position: | 65-223 |
| Cow position: | chr26:12940515-12940359 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 65-471 |
| Cow position: | chr26:18825168-18825566 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 78-421 |
| Cow position: | chr26:7148201-7148541 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 79-587 |
| Cow position: | chr26:16550091-16549594 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 247 |
| Conread position: | 80-235 |
| Cow position: | chr26:23924952-23924789 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 80-270 |
| Cow position: | chr26:7687143-7687337 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 80-280 |
| Cow position: | chr26:24240781-24240569 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 80-318 |
| Cow position: | chr26:12964595-12964839 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 80-318 |
| Cow position: | chr26:19446234-19445984 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 80-321 |
| Cow position: | chr26:20769953-20769709 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 168 |
| Conread position: | 80-333 |
| Cow position: | chr26:23582843-23583104 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 179 |
| Conread position: | 80-347 |
| Cow position: | chr26:28251258-28250976 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 242 |
| Conread position: | 80-365 |
| Cow position: | chr26:14175384-14175095 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 108, 205 |
| Conread position: | 80-394 |
| Cow position: | chr26:31605508-31605192 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 103, 178 |
| Conread position: | 80-480 |
| Cow position: | chr26:27491399-27491804 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 80-498 |
| Cow position: | chr26:9104179-9104604 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 80-500 |
| Cow position: | chr26:13021043-13021472 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 178 |
| Conread position: | 80-553 |
| Cow position: | chr26:16783928-16783436 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 238 |
| Conread position: | 80-583 |
| Cow position: | chr26:8699945-8700458 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 232 |
| Conread position: | 80-590 |
| Cow position: | chr26:8307426-8307927 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 158 |
| Conread position: | 81-372 |
| Cow position: | chr26:22892344-22892633 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 112, 180 |
| Conread position: | 81-602 |
| Cow position: | chr26:12145017-12145531 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 234 |
| Conread position: | 82-355 |
| Cow position: | chr26:23315874-23315590 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 39, 238 |
| Conread position: | 83-355 |
| Cow position: | chr26:34060432-34060157 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 228 |
| Conread position: | 84-540 |
| Cow position: | chr26:32652636-32653090 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 147 |
| Conread position: | 85-355 |
| Cow position: | chr26:22354510-22354237 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 92-392 |
| Cow position: | chr26:21636947-21637250 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 152 |
| Conread position: | 92-507 |
| Cow position: | chr26:33201980-33202387 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 144 |
| Conread position: | 92-554 |
| Cow position: | chr26:26888043-26888509 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 176 |
| Conread position: | 93-355 |
| Cow position: | chr26:16179651-16179383 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 206 |
| Conread position: | 95-548 |
| Cow position: | chr26:33112299-33112751 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 99-428 |
| Cow position: | chr26:8811210-8810882 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 216 |
| Conread position: | 99-526 |
| Cow position: | chr26:31856792-31856355 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 223 |
| Conread position: | 100-415 |
| Cow position: | chr26:33096476-33096803 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 80, 205 |
| Conread position: | 100-430 |
| Cow position: | chr26:29333175-29332848 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 221 |
| Conread position: | 100-535 |
| Cow position: | chr26:32683198-32682757 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 218 |
| Conread position: | 100-554 |
| Cow position: | chr26:23142022-23142472 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 149 |
| Conread position: | 101-387 |
| Cow position: | chr26:25526330-25526038 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 96, 136 |
| Conread position: | 114-589 |
| Cow position: | chr26:9867058-9867543 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 145-308 |
| Cow position: | chr26:31572283-31572117 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 150-498 |
| Cow position: | chr26:12099053-12099406 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 171 |
| Conread position: | 153-318 |
| Cow position: | chr26:7156000-7155831 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 156-419 |
| Cow position: | chr26:24280850-24280588 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 92 |
| Conread position: | 166-417 |
| Cow position: | chr26:28760081-28760325 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 256-600 |
| Cow position: | chr26:32933654-32933308 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 35 |
Show alignments to all cow chromosomes.