Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-265
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 249
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 257
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 272
               

               Conread position:
               1-529
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 246
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               53-598
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               58-594
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 129
               

               Conread position:
               65-223
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               65-471
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               78-421
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               111, 137
               

               Conread position:
               79-587
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 247
               

               Conread position:
               80-235
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               80-270
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               80-280
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               80-318
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               80-318
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               80-321
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               80-333
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               115, 179
               

               Conread position:
               80-347
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 242
               

               Conread position:
               80-365
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               108, 205
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               103, 178
               

               Conread position:
               80-480
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               80-498
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               80-500
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 178
               

               Conread position:
               80-553
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 238
               

               Conread position:
               80-583
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 232
               

               Conread position:
               80-590
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 158
               

               Conread position:
               81-372
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               112, 180
               

               Conread position:
               81-602
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 234
               

               Conread position:
               82-355
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               39, 238
               

               Conread position:
               83-355
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               111, 228
               

               Conread position:
               84-540
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 147
               

               Conread position:
               85-355
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               92-392
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 152
               

               Conread position:
               92-507
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 144
               

               Conread position:
               92-554
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 176
               

               Conread position:
               93-355
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 206
               

               Conread position:
               95-548
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               99-428
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 216
               

               Conread position:
               99-526
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 223
               

               Conread position:
               100-415
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 205
               

               Conread position:
               100-430
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 221
               

               Conread position:
               100-535
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 218
               

               Conread position:
               100-554
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               317
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               91, 149
               

               Conread position:
               101-387
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               96, 136
               

               Conread position:
               114-589
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               145-308
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               150-498
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 171
               

               Conread position:
               153-318
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               156-419
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               166-417
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               256-600
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 35
               
Show alignments to all cow chromosomes.