Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 241
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 57
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 242
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 71
               

               Conread position:
               1-539
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 142
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 269
               

               Conread position:
               1-598
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               2-394
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               3-292
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               185, 47
               

               Conread position:
               45-360
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               146, 196
               

               Conread position:
               46-447
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               46-553
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 25
               

               Conread position:
               53-365
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               53-476
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               57-455
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               58-385
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               60-583
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               60-602
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               65-602
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               66-372
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               171, 22
               

               Conread position:
               69-578
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               77-430
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               77-633
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               113, 234
               

               Conread position:
               79-432
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               79-583
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 114
               

               Conread position:
               80-262
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               110, 163
               

               Conread position:
               80-301
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               80-306
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               80-308
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 52
               

               Conread position:
               80-324
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               106, 172
               

               Conread position:
               80-330
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               163, 11
               

               Conread position:
               80-332
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               111, 228
               

               Conread position:
               80-333
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 12
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               80-410
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 234
               

               Conread position:
               80-424
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 7
               

               Conread position:
               80-455
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               121, 139
               

               Conread position:
               80-473
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 121
               

               Conread position:
               80-493
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               119, 175
               

               Conread position:
               80-508
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 224
               

               Conread position:
               80-519
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 174
               

               Conread position:
               80-540
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               80-555
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 241
               

               Conread position:
               80-580
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 180
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 171
               

               Conread position:
               80-603
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 61
               

               Conread position:
               81-308
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               81-361
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 230
               

               Conread position:
               81-419
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 140
               

               Conread position:
               81-561
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 242
               

               Conread position:
               89-589
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               90-343
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               146, 97
               

               Conread position:
               92-418
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               97, 222
               

               Conread position:
               92-424
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               91, 231
               

               Conread position:
               92-562
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               92-590
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               92-596
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               92-602
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               92-603
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 111
               

               Conread position:
               94-316
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 163
               

               Conread position:
               96-540
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               99-507
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 178
               

               Conread position:
               100-292
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               100-356
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               82, 216
               

               Conread position:
               100-394
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               81, 123
               

               Conread position:
               100-424
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               100-461
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 117
               

               Conread position:
               100-551
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 78
               

               Conread position:
               100-552
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 213
               

               Conread position:
               100-590
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 107
               

               Conread position:
               100-602
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               326
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 171
               

               Conread position:
               100-630
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 212
               

               Conread position:
               102-387
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               102-583
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 219
               

               Conread position:
               102-602
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 95
               

               Conread position:
               104-345
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               89, 156
               

               Conread position:
               150-418
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 111
               

               Conread position:
               151-590
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               167-552
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               192-538
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               273-609
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               274-602
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 38
               
Show alignments to all cow chromosomes.