Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-304
Cow position: chr27:29504856-29504543 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 66

Conread position: 1-376
Cow position: chr27:27613824-27613468 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 49

Conread position: 1-377
Cow position: chr27:15409251-15408872 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 241

Conread position: 1-387
Cow position: chr27:29431250-29431637 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 150

Conread position: 1-414
Cow position: chr27:22547614-22547197 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 1-424
Cow position: chr27:20553535-20553936 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 57

Conread position: 1-447
Cow position: chr27:16284263-16284715 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 242

Conread position: 1-447
Cow position: chr27:30890075-30890528 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 71

Conread position: 1-539
Cow position: chr27:22171076-22171633 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 142

Conread position: 1-557
Cow position: chr27:22035597-22035027 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 269

Conread position: 1-598
Cow position: chr27:21393719-21393112 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 2-394
Cow position: chr27:26150823-26151208 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 16

Conread position: 3-292
Cow position: chr27:20093037-20092746 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 185, 47

Conread position: 45-360
Cow position: chr27:22513841-22513520 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 146, 196

Conread position: 46-447
Cow position: chr27:27389186-27388786 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 46-553
Cow position: chr27:26999582-26999077 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 25

Conread position: 53-365
Cow position: chr27:11480790-11480470 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 25

Conread position: 53-476
Cow position: chr27:23483073-23483496 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 26

Conread position: 57-455
Cow position: chr27:24014891-24014491 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 11

Conread position: 58-385
Cow position: chr27:3744-4067 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 103

Conread position: 60-583
Cow position: chr27:17397601-17397074 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 19

Conread position: 60-602
Cow position: chr27:20549858-20549291 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 19

Conread position: 65-602
Cow position: chr27:4672870-4673414 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 66-372
Cow position: chr27:26426075-26426375 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 22

Conread position: 69-578
Cow position: chr27:30374708-30374181 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 24

Conread position: 77-430
Cow position: chr27:24321058-24321413 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 26

Conread position: 77-633
Cow position: chr27:10307429-10306847 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 50

Conread position: 79-389
Cow position: chr27:6787826-6788142 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 113, 234

Conread position: 79-432
Cow position: chr27:20795663-20796011 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 48

Conread position: 79-583
Cow position: chr27:10582243-10582743 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 114

Conread position: 80-262
Cow position: chr27:23560160-23559974 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 110, 163

Conread position: 80-301
Cow position: chr27:20481487-20481276 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 156, 42

Conread position: 80-306
Cow position: chr27:23594193-23594422 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 12

Conread position: 80-308
Cow position: chr27:16625771-16626005 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 52

Conread position: 80-324
Cow position: chr27:8405951-8405712 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 172

Conread position: 80-330
Cow position: chr27:22569656-22569898 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 163, 11

Conread position: 80-332
Cow position: chr27:31148632-31148892 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 228

Conread position: 80-333
Cow position: chr27:16103683-16103936 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 12

Conread position: 80-394
Cow position: chr27:16705122-16705435 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 39

Conread position: 80-410
Cow position: chr27:19685842-19685509 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 234

Conread position: 80-424
Cow position: chr27:27632727-27632390 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 7

Conread position: 80-455
Cow position: chr27:1290980-1290618 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 251
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 121, 139

Conread position: 80-473
Cow position: chr27:7412264-7412651 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 121

Conread position: 80-493
Cow position: chr27:6541503-6541906 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 119, 175

Conread position: 80-508
Cow position: chr27:26413383-26412954 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 224

Conread position: 80-519
Cow position: chr27:24477288-24477714 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 174

Conread position: 80-540
Cow position: chr27:28206673-28207127 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 60

Conread position: 80-555
Cow position: chr27:19717786-19718269 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 241

Conread position: 80-580
Cow position: chr27:26984218-26984714 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 180

Conread position: 80-602
Cow position: chr27:19387890-19388425 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 69

Conread position: 80-602
Cow position: chr27:21669246-21668742 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 171

Conread position: 80-603
Cow position: chr27:23452333-23452879 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 61

Conread position: 81-308
Cow position: chr27:27694897-27694664 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 38

Conread position: 81-361
Cow position: chr27:23890810-23891093 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 230

Conread position: 81-419
Cow position: chr27:15668899-15668553 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 140

Conread position: 81-561
Cow position: chr27:30550862-30551369 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 242

Conread position: 89-589
Cow position: chr27:20641455-20640958 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 50

Conread position: 90-343
Cow position: chr27:16589821-16589575 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 97

Conread position: 92-418
Cow position: chr27:22454892-22454565 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 97, 222

Conread position: 92-424
Cow position: chr27:19660815-19661162 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 91, 231

Conread position: 92-562
Cow position: chr27:299497-299027 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 40

Conread position: 92-590
Cow position: chr27:1122915-1123409 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 92-596
Cow position: chr27:23472142-23472646 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 92-602
Cow position: chr27:15319340-15319848 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 92-603
Cow position: chr27:14670499-14669981 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 111

Conread position: 94-316
Cow position: chr27:21213673-21213885 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 88

Conread position: 95-602
Cow position: chr27:20828824-20828304 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 163

Conread position: 96-540
Cow position: chr27:4386174-4385733 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 178

Conread position: 99-507
Cow position: chr27:23576648-23576237 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 178

Conread position: 100-292
Cow position: chr27:23510880-23511082 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 13

Conread position: 100-356
Cow position: chr27:26490017-26489751 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 216

Conread position: 100-394
Cow position: chr27:11296161-11296446 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 123

Conread position: 100-424
Cow position: chr27:30764922-30765251 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 19

Conread position: 100-461
Cow position: chr27:15204338-15203975 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 117

Conread position: 100-551
Cow position: chr27:435125-435588 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 78

Conread position: 100-552
Cow position: chr27:26428241-26427781 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 213

Conread position: 100-590
Cow position: chr27:15871052-15871548 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 107

Conread position: 100-602
Cow position: chr27:1637044-1636551 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 326
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 93, 171

Conread position: 100-630
Cow position: chr27:11435431-11434902 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 212

Conread position: 102-387
Cow position: chr27:30988691-30988979 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 26

Conread position: 102-583
Cow position: chr27:22426939-22426449 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 219

Conread position: 102-602
Cow position: chr27:13410269-13409767 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 95

Conread position: 104-345
Cow position: chr27:20789484-20789240 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 156

Conread position: 150-418
Cow position: chr27:16871975-16871706 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 46, 111

Conread position: 151-590
Cow position: chr27:6522986-6523447 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 167-552
Cow position: chr27:30856426-30856055 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 93

Conread position: 192-538
Cow position: chr27:4819714-4819378 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 103

Conread position: 273-609
Cow position: chr27:16822887-16823214 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 274-602
Cow position: chr27:7958759-7958437 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 38

Show alignments to all cow chromosomes.