Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-333
Cow position: chr29:44681951-44682273 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 244, 50

Conread position: 1-345
Cow position: chr29:41112709-41113045 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 29

Conread position: 1-438
Cow position: chr29:39111143-39111586 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 107

Conread position: 1-534
Cow position: chr29:3704039-3704573 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 82

Conread position: 1-545
Cow position: chr29:28196839-28197393 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 15

Conread position: 1-557
Cow position: chr29:35501484-35502043 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 38

Conread position: 1-579
Cow position: chr29:40117746-40117152 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 119

Conread position: 1-603
Cow position: chr29:15940476-15941089 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 3-539
Cow position: chr29:43328811-43328259 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 4-218
Cow position: chr29:742492-742700 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 5-471
Cow position: chr29:10456403-10456863 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 126

Conread position: 5-588
Cow position: chr29:41811431-41812004 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 115

Conread position: 45-688
Cow position: chr29:29588810-29589446 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 24

Conread position: 58-602
Cow position: chr29:465294-465843 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 200

Conread position: 61-583
Cow position: chr29:36217212-36216694 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 18

Conread position: 77-416
Cow position: chr29:17222499-17222152 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 20, 10

Conread position: 78-609
Cow position: chr29:7955906-7956418 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 357
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 13

Conread position: 79-341
Cow position: chr29:23243794-23244064 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 95

Conread position: 79-381
Cow position: chr29:28739709-28739408 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 225

Conread position: 79-540
Cow position: chr29:10839025-10838561 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 32

Conread position: 79-569
Cow position: chr29:28636985-28637468 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 79-574
Cow position: chr29:20626651-20626171 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 113

Conread position: 80-224
Cow position: chr29:38978613-38978464 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 19

Conread position: 80-243
Cow position: chr29:20770427-20770259 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 51

Conread position: 80-282
Cow position: chr29:34358895-34359107 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 179

Conread position: 80-292
Cow position: chr29:27329976-27329755 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 102, 178

Conread position: 80-351
Cow position: chr29:5186410-5186689 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 110, 192

Conread position: 80-369
Cow position: chr29:709050-709331 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 38

Conread position: 80-410
Cow position: chr29:25737331-25737667 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 187

Conread position: 80-411
Cow position: chr29:11562696-11562363 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 181

Conread position: 80-424
Cow position: chr29:109770-109446 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 116, 57

Conread position: 80-452
Cow position: chr29:22162166-22162549 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 239

Conread position: 80-549
Cow position: chr29:9912259-9911773 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 239

Conread position: 80-586
Cow position: chr29:26778965-26778463 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 80-587
Cow position: chr29:4480090-4480603 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 69

Conread position: 80-602
Cow position: chr29:36530950-36530420 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 235

Conread position: 81-495
Cow position: chr29:10058454-10058862 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 81-515
Cow position: chr29:5892927-5892495 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 167

Conread position: 82-416
Cow position: chr29:8926380-8926715 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 157

Conread position: 83-421
Cow position: chr29:22613510-22613174 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 236

Conread position: 83-447
Cow position: chr29:749827-750185 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 16

Conread position: 85-362
Cow position: chr29:39329525-39329798 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 106

Conread position: 85-425
Cow position: chr29:41530927-41530585 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 5

Conread position: 88-381
Cow position: chr29:463577-463874 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 168

Conread position: 89-394
Cow position: chr29:16309817-16309517 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 216

Conread position: 90-394
Cow position: chr29:22714650-22714961 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 90-412
Cow position: chr29:1557004-1556680 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 85

Conread position: 90-426
Cow position: chr29:22068667-22069013 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 221

Conread position: 90-602
Cow position: chr29:43496112-43495626 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 91-602
Cow position: chr29:2744195-2744715 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 92-308
Cow position: chr29:29314581-29314808 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 58

Conread position: 92-352
Cow position: chr29:32211000-32211251 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 32

Conread position: 92-391
Cow position: chr29:868846-868542 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 103, 220

Conread position: 92-420
Cow position: chr29:5098695-5099022 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 126

Conread position: 92-431
Cow position: chr29:26672840-26673174 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 55

Conread position: 92-438
Cow position: chr29:40166315-40165962 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 92-451
Cow position: chr29:40298949-40299307 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 159, 98

Conread position: 92-589
Cow position: chr29:17607489-17606985 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 156

Conread position: 92-594
Cow position: chr29:17110028-17109536 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 35

Conread position: 95-538
Cow position: chr29:26615652-26616114 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 164

Conread position: 95-601
Cow position: chr29:32290677-32290159 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 55

Conread position: 95-607
Cow position: chr29:26263904-26263401 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 96-513
Cow position: chr29:6293411-6293817 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 214

Conread position: 100-329
Cow position: chr29:31674696-31674456 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 100-351
Cow position: chr29:44988727-44988972 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 74

Conread position: 100-360
Cow position: chr29:3100204-3100461 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 145, 90

Conread position: 100-360
Cow position: chr29:9718709-9718972 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 81, 32

Conread position: 100-394
Cow position: chr29:23844901-23844598 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 157

Conread position: 100-394
Cow position: chr29:34773674-34773961 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 212

Conread position: 100-438
Cow position: chr29:14501656-14501316 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 147

Conread position: 100-562
Cow position: chr29:20673747-20674210 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 87

Conread position: 100-579
Cow position: chr29:86948-87434 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 219

Conread position: 100-602
Cow position: chr29:21443275-21443790 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 218

Conread position: 100-603
Cow position: chr29:15738277-15738789 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 101-515
Cow position: chr29:29975100-29974690 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 81

Conread position: 101-548
Cow position: chr29:4367788-4367349 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 29, 18

Conread position: 106-408
Cow position: chr29:18735582-18735891 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 155

Conread position: 113-589
Cow position: chr29:11135846-11136318 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 29

Conread position: 125-424
Cow position: chr29:2623444-2623744 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 20

Conread position: 150-426
Cow position: chr29:21682504-21682775 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 70

Conread position: 254-591
Cow position: chr29:32308421-32308755 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 57

Show alignments to all cow chromosomes.