Cow genome map
Conread name: | Ova1-OVR010003H11 |
Conread position: | 1-333 |
Cow position: | chr29:44681951-44682273 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 227 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 244, 50 |
Conread position: | 1-345 |
Cow position: | chr29:41112709-41113045 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 243 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 51, 29 |
Conread position: | 1-438 |
Cow position: | chr29:39111143-39111586 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 107 |
Conread position: | 1-534 |
Cow position: | chr29:3704039-3704573 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 82 |
Conread position: | 1-545 |
Cow position: | chr29:28196839-28197393 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 15 |
Conread position: | 1-557 |
Cow position: | chr29:35501484-35502043 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 38 |
Conread position: | 1-579 |
Cow position: | chr29:40117746-40117152 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 119 |
Conread position: | 1-603 |
Cow position: | chr29:15940476-15941089 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 3-539 |
Cow position: | chr29:43328811-43328259 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 27 |
Conread position: | 4-218 |
Cow position: | chr29:742492-742700 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 5-471 |
Cow position: | chr29:10456403-10456863 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 126 |
Conread position: | 5-588 |
Cow position: | chr29:41811431-41812004 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 115 |
Conread position: | 45-688 |
Cow position: | chr29:29588810-29589446 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 24 |
Conread position: | 58-602 |
Cow position: | chr29:465294-465843 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 200 |
Conread position: | 61-583 |
Cow position: | chr29:36217212-36216694 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 18 |
Conread position: | 77-416 |
Cow position: | chr29:17222499-17222152 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 239 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 20, 10 |
Conread position: | 78-609 |
Cow position: | chr29:7955906-7956418 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 357 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 9, 13 |
Conread position: | 79-341 |
Cow position: | chr29:23243794-23244064 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 193 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 115, 95 |
Conread position: | 79-381 |
Cow position: | chr29:28739709-28739408 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 210 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 113, 225 |
Conread position: | 79-540 |
Cow position: | chr29:10839025-10838561 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 32 |
Conread position: | 79-569 |
Cow position: | chr29:28636985-28637468 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 12 |
Conread position: | 79-574 |
Cow position: | chr29:20626651-20626171 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 113 |
Conread position: | 80-224 |
Cow position: | chr29:38978613-38978464 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 96, 19 |
Conread position: | 80-243 |
Cow position: | chr29:20770427-20770259 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 102, 51 |
Conread position: | 80-282 |
Cow position: | chr29:34358895-34359107 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 107, 179 |
Conread position: | 80-292 |
Cow position: | chr29:27329976-27329755 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 161 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 102, 178 |
Conread position: | 80-351 |
Cow position: | chr29:5186410-5186689 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 200 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 110, 192 |
Conread position: | 80-369 |
Cow position: | chr29:709050-709331 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 201 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 80-410 |
Cow position: | chr29:25737331-25737667 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 187 |
Conread position: | 80-411 |
Cow position: | chr29:11562696-11562363 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 181 |
Conread position: | 80-424 |
Cow position: | chr29:109770-109446 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 116, 57 |
Conread position: | 80-452 |
Cow position: | chr29:22162166-22162549 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 239 |
Conread position: | 80-549 |
Cow position: | chr29:9912259-9911773 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 239 |
Conread position: | 80-586 |
Cow position: | chr29:26778965-26778463 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 69 |
Conread position: | 80-587 |
Cow position: | chr29:4480090-4480603 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 69 |
Conread position: | 80-602 |
Cow position: | chr29:36530950-36530420 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 235 |
Conread position: | 81-495 |
Cow position: | chr29:10058454-10058862 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 47 |
Conread position: | 81-515 |
Cow position: | chr29:5892927-5892495 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 167 |
Conread position: | 82-416 |
Cow position: | chr29:8926380-8926715 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 157 |
Conread position: | 83-421 |
Cow position: | chr29:22613510-22613174 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 248 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 104, 236 |
Conread position: | 83-447 |
Cow position: | chr29:749827-750185 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 256 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 108, 16 |
Conread position: | 85-362 |
Cow position: | chr29:39329525-39329798 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 183 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 136, 106 |
Conread position: | 85-425 |
Cow position: | chr29:41530927-41530585 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 244 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 97, 5 |
Conread position: | 88-381 |
Cow position: | chr29:463577-463874 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 209 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 10, 168 |
Conread position: | 89-394 |
Cow position: | chr29:16309817-16309517 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 106, 216 |
Conread position: | 90-394 |
Cow position: | chr29:22714650-22714961 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 67 |
Conread position: | 90-412 |
Cow position: | chr29:1557004-1556680 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 85 |
Conread position: | 90-426 |
Cow position: | chr29:22068667-22069013 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 239 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 93, 221 |
Conread position: | 90-602 |
Cow position: | chr29:43496112-43495626 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 29 |
Conread position: | 91-602 |
Cow position: | chr29:2744195-2744715 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 92-308 |
Cow position: | chr29:29314581-29314808 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 163 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 48, 58 |
Conread position: | 92-352 |
Cow position: | chr29:32211000-32211251 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 134, 32 |
Conread position: | 92-391 |
Cow position: | chr29:868846-868542 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 213 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 103, 220 |
Conread position: | 92-420 |
Cow position: | chr29:5098695-5099022 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 126 |
Conread position: | 92-431 |
Cow position: | chr29:26672840-26673174 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 242 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 48, 55 |
Conread position: | 92-438 |
Cow position: | chr29:40166315-40165962 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 81 |
Conread position: | 92-451 |
Cow position: | chr29:40298949-40299307 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 246 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 159, 98 |
Conread position: | 92-589 |
Cow position: | chr29:17607489-17606985 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 156 |
Conread position: | 92-594 |
Cow position: | chr29:17110028-17109536 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 35 |
Conread position: | 95-538 |
Cow position: | chr29:26615652-26616114 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 164 |
Conread position: | 95-601 |
Cow position: | chr29:32290677-32290159 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 55 |
Conread position: | 95-607 |
Cow position: | chr29:26263904-26263401 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 96-513 |
Cow position: | chr29:6293411-6293817 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 214 |
Conread position: | 100-329 |
Cow position: | chr29:31674696-31674456 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 168 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 100-351 |
Cow position: | chr29:44988727-44988972 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 89, 74 |
Conread position: | 100-360 |
Cow position: | chr29:3100204-3100461 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 191 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 145, 90 |
Conread position: | 100-360 |
Cow position: | chr29:9718709-9718972 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 81, 32 |
Conread position: | 100-394 |
Cow position: | chr29:23844901-23844598 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 218 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 91, 157 |
Conread position: | 100-394 |
Cow position: | chr29:34773674-34773961 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 212 |
Conread position: | 100-438 |
Cow position: | chr29:14501656-14501316 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 147 |
Conread position: | 100-562 |
Cow position: | chr29:20673747-20674210 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 87 |
Conread position: | 100-579 |
Cow position: | chr29:86948-87434 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 219 |
Conread position: | 100-602 |
Cow position: | chr29:21443275-21443790 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 218 |
Conread position: | 100-603 |
Cow position: | chr29:15738277-15738789 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 19 |
Conread position: | 101-515 |
Cow position: | chr29:29975100-29974690 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 81 |
Conread position: | 101-548 |
Cow position: | chr29:4367788-4367349 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 309 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 29, 18 |
Conread position: | 106-408 |
Cow position: | chr29:18735582-18735891 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 79, 155 |
Conread position: | 113-589 |
Cow position: | chr29:11135846-11136318 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 29 |
Conread position: | 125-424 |
Cow position: | chr29:2623444-2623744 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 221 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 10, 20 |
Conread position: | 150-426 |
Cow position: | chr29:21682504-21682775 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 190 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 44, 70 |
Conread position: | 254-591 |
Cow position: | chr29:32308421-32308755 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 57 |
Show alignments to all cow chromosomes.