Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-234 |
| Cow position: | chr3:75608646-75608399 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 156 |
| Conread position: | 1-239 |
| Cow position: | chr3:64135855-64135612 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 180, 50 |
| Conread position: | 1-279 |
| Cow position: | chr3:74584348-74584072 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 1-378 |
| Cow position: | chr3:22232510-22232882 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 1-393 |
| Cow position: | chr3:18725505-18725888 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 1-418 |
| Cow position: | chr3:26066145-26065721 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 1-426 |
| Cow position: | chr3:68707864-68708289 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 1-429 |
| Cow position: | chr3:68880973-68881400 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 1-434 |
| Cow position: | chr3:74533492-74533051 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 1-588 |
| Cow position: | chr3:15057484-15058061 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 83 |
| Conread position: | 3-361 |
| Cow position: | chr3:2199020-2198660 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 93 |
| Conread position: | 4-302 |
| Cow position: | chr3:60264566-60264884 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 266 |
| Conread position: | 20-411 |
| Cow position: | chr3:525470-525081 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 31-404 |
| Cow position: | chr3:69416671-69417054 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 31-590 |
| Cow position: | chr3:72777348-72776783 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 38-233 |
| Cow position: | chr3:3472140-3471941 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 27 |
| Conread position: | 49-320 |
| Cow position: | chr3:20677751-20678020 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 49-602 |
| Cow position: | chr3:77188528-77187984 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 13 |
| Conread position: | 51-503 |
| Cow position: | chr3:5100684-5101125 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 53-424 |
| Cow position: | chr3:70334609-70334989 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 138, 28 |
| Conread position: | 61-449 |
| Cow position: | chr3:53739107-53739500 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 64-395 |
| Cow position: | chr3:63316207-63315874 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 28 |
| Conread position: | 65-394 |
| Cow position: | chr3:56476756-56476427 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 65-438 |
| Cow position: | chr3:82019765-82020149 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 65-480 |
| Cow position: | chr3:80072203-80071775 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 65-557 |
| Cow position: | chr3:16752185-16752665 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 14 |
| Conread position: | 70-602 |
| Cow position: | chr3:2630846-2630327 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 75-420 |
| Cow position: | chr3:71161865-71161512 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 76-390 |
| Cow position: | chr3:11712030-11711702 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 106, 246 |
| Conread position: | 78-521 |
| Cow position: | chr3:11987392-11986949 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 226 |
| Conread position: | 78-586 |
| Cow position: | chr3:57577760-57577250 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 227 |
| Conread position: | 79-326 |
| Cow position: | chr3:54373798-54374052 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 113, 242 |
| Conread position: | 79-387 |
| Cow position: | chr3:43233568-43233255 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 113, 131 |
| Conread position: | 79-493 |
| Cow position: | chr3:49679194-49678765 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 114, 248 |
| Conread position: | 79-505 |
| Cow position: | chr3:28908141-28908570 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 221 |
| Conread position: | 79-602 |
| Cow position: | chr3:18459466-18459986 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 99 |
| Conread position: | 80-221 |
| Cow position: | chr3:64196887-64196739 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 80-228 |
| Cow position: | chr3:69785563-69785718 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 80-241 |
| Cow position: | chr3:49363170-49363011 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 80-244 |
| Cow position: | chr3:15950852-15951019 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 80-270 |
| Cow position: | chr3:73237257-73237057 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 80-271 |
| Cow position: | chr3:78093328-78093522 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 165, 113 |
| Conread position: | 80-285 |
| Cow position: | chr3:55177685-55177905 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 98 |
| Conread position: | 80-292 |
| Cow position: | chr3:53508672-53508462 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 80-309 |
| Cow position: | chr3:19585924-19585686 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 80-309 |
| Cow position: | chr3:26874651-26874414 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 80-321 |
| Cow position: | chr3:60265193-60265430 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 156, 51 |
| Conread position: | 80-330 |
| Cow position: | chr3:74079576-74079834 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 80-351 |
| Cow position: | chr3:6182166-6182415 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 80-356 |
| Cow position: | chr3:23105301-23105583 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 239 |
| Conread position: | 80-366 |
| Cow position: | chr3:15506509-15506220 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 80-368 |
| Cow position: | chr3:59621587-59621865 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 116, 189 |
| Conread position: | 80-373 |
| Cow position: | chr3:68156784-68156496 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 80-376 |
| Cow position: | chr3:13507529-13507226 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 229 |
| Conread position: | 80-385 |
| Cow position: | chr3:23444827-23445136 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 241 |
| Conread position: | 80-391 |
| Cow position: | chr3:8061187-8060880 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 111, 51 |
| Conread position: | 80-393 |
| Cow position: | chr3:83455091-83455406 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 80-394 |
| Cow position: | chr3:18686967-18686661 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 80-394 |
| Cow position: | chr3:52608243-52607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 150 |
| Conread position: | 80-412 |
| Cow position: | chr3:54946192-54945851 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 238 |
| Conread position: | 80-416 |
| Cow position: | chr3:32585211-32584880 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 122, 174 |
| Conread position: | 80-416 |
| Cow position: | chr3:68627628-68627953 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 80-421 |
| Cow position: | chr3:26681753-26682076 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 80-424 |
| Cow position: | chr3:5097268-5096917 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 239 |
| Conread position: | 80-428 |
| Cow position: | chr3:39969801-39970162 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 183 |
| Conread position: | 80-429 |
| Cow position: | chr3:3738542-3738200 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 80-429 |
| Cow position: | chr3:15228762-15229110 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 110, 193 |
| Conread position: | 80-429 |
| Cow position: | chr3:73443035-73443378 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 80-430 |
| Cow position: | chr3:62789114-62789496 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 80-443 |
| Cow position: | chr3:70401957-70401598 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 39 |
| Conread position: | 80-444 |
| Cow position: | chr3:27274589-27274233 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 80-480 |
| Cow position: | chr3:81471035-81471440 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 135 |
| Conread position: | 80-486 |
| Cow position: | chr3:83815727-83816149 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 23 |
| Conread position: | 80-494 |
| Cow position: | chr3:53150392-53149970 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 218 |
| Conread position: | 80-499 |
| Cow position: | chr3:20437595-20438022 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 161, 194 |
| Conread position: | 80-502 |
| Cow position: | chr3:22676049-22676443 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 80-502 |
| Cow position: | chr3:55189692-55190109 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 192 |
| Conread position: | 80-503 |
| Cow position: | chr3:53428856-53429253 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 95 |
| Conread position: | 80-503 |
| Cow position: | chr3:59101888-59101475 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 80-507 |
| Cow position: | chr3:57760559-57760116 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 80-517 |
| Cow position: | chr3:13353422-13352981 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 80-549 |
| Cow position: | chr3:116251-115810 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 176 |
| Conread position: | 80-549 |
| Cow position: | chr3:26553654-26554125 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 236 |
| Conread position: | 80-557 |
| Cow position: | chr3:7337723-7338194 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 80-580 |
| Cow position: | chr3:56059872-56059343 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 240 |
| Conread position: | 80-589 |
| Cow position: | chr3:55271984-55272485 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 213 |
| Conread position: | 80-589 |
| Cow position: | chr3:59799309-59798800 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 233 |
| Conread position: | 80-589 |
| Cow position: | chr3:75711367-75710860 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 106 |
| Conread position: | 80-596 |
| Cow position: | chr3:65413217-65413751 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 80-602 |
| Cow position: | chr3:14552936-14552414 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 80-602 |
| Cow position: | chr3:26218990-26219526 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 80-602 |
| Cow position: | chr3:50768740-50768209 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 232 |
| Conread position: | 80-602 |
| Cow position: | chr3:61224683-61225206 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 148 |
| Conread position: | 80-603 |
| Cow position: | chr3:9663111-9663653 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 531 |
| Conread position: | 80-603 |
| Cow position: | chr3:80581716-80581209 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 80-604 |
| Cow position: | chr3:48363133-48362616 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 80-607 |
| Cow position: | chr3:80565027-80564482 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 94 |
| Conread position: | 81-292 |
| Cow position: | chr3:48072822-48073033 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 169 |
| Conread position: | 81-466 |
| Cow position: | chr3:2396729-2397111 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 56 |
| Conread position: | 82-321 |
| Cow position: | chr3:54506766-54506521 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 106, 167 |
| Conread position: | 83-394 |
| Cow position: | chr3:73395174-73394861 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 83-420 |
| Cow position: | chr3:59208853-59208532 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 83-527 |
| Cow position: | chr3:12711857-12712315 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 234 |
| Conread position: | 84-424 |
| Cow position: | chr3:67744571-67744914 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 84-491 |
| Cow position: | chr3:83441836-83442232 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 84-602 |
| Cow position: | chr3:70565681-70566204 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 85-418 |
| Cow position: | chr3:38864182-38863833 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 32, 239 |
| Conread position: | 90-524 |
| Cow position: | chr3:31771734-31771310 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 90-555 |
| Cow position: | chr3:29891358-29891828 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 224 |
| Conread position: | 90-596 |
| Cow position: | chr3:15388270-15387745 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 90-602 |
| Cow position: | chr3:17936788-17937316 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 92-276 |
| Cow position: | chr3:1785196-1785385 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 92-370 |
| Cow position: | chr3:78092462-78092740 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 151 |
| Conread position: | 92-395 |
| Cow position: | chr3:26970862-26970569 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 145, 83 |
| Conread position: | 92-407 |
| Cow position: | chr3:14632934-14633255 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 92-408 |
| Cow position: | chr3:70899940-70899630 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 92-418 |
| Cow position: | chr3:55124231-55124558 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 163 |
| Conread position: | 92-465 |
| Cow position: | chr3:74601164-74600792 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 5, 214 |
| Conread position: | 92-486 |
| Cow position: | chr3:70896097-70895699 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 163 |
| Conread position: | 92-513 |
| Cow position: | chr3:53222062-53221653 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 92-516 |
| Cow position: | chr3:10958191-10958603 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 168 |
| Conread position: | 92-549 |
| Cow position: | chr3:4461435-4461899 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 94-399 |
| Cow position: | chr3:7331080-7331377 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 95-300 |
| Cow position: | chr3:55109567-55109782 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 166 |
| Conread position: | 95-429 |
| Cow position: | chr3:73759471-73759810 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 96-242 |
| Cow position: | chr3:3316771-3316918 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 96-322 |
| Cow position: | chr3:56523401-56523619 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 96-363 |
| Cow position: | chr3:56612412-56612132 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 209 |
| Conread position: | 96-424 |
| Cow position: | chr3:74878544-74878890 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 214 |
| Conread position: | 96-602 |
| Cow position: | chr3:2675074-2674563 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 204 |
| Conread position: | 97-394 |
| Cow position: | chr3:75080807-75080511 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 208 |
| Conread position: | 97-511 |
| Cow position: | chr3:10347395-10346974 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 100-371 |
| Cow position: | chr3:21547059-21547334 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 204 |
| Conread position: | 100-379 |
| Cow position: | chr3:39661416-39661690 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 100-418 |
| Cow position: | chr3:49482675-49482984 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 100-443 |
| Cow position: | chr3:2216409-2216055 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 220 |
| Conread position: | 100-472 |
| Cow position: | chr3:78077226-78076858 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 207 |
| Conread position: | 100-514 |
| Cow position: | chr3:31206917-31206497 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 214 |
| Conread position: | 100-549 |
| Cow position: | chr3:35852430-35852881 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 100-601 |
| Cow position: | chr3:6690041-6689530 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 212 |
| Conread position: | 100-602 |
| Cow position: | chr3:18185116-18184608 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 225 |
| Conread position: | 100-602 |
| Cow position: | chr3:49650429-49649915 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 218 |
| Conread position: | 100-602 |
| Cow position: | chr3:79902537-79902037 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 90 |
| Conread position: | 101-419 |
| Cow position: | chr3:17456228-17456550 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 140 |
| Conread position: | 101-516 |
| Cow position: | chr3:49460886-49461315 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 221 |
| Conread position: | 101-590 |
| Cow position: | chr3:15954045-15954530 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 163 |
| Conread position: | 101-601 |
| Cow position: | chr3:72391122-72390618 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 208 |
| Conread position: | 105-387 |
| Cow position: | chr3:44932552-44932260 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 214 |
| Conread position: | 108-486 |
| Cow position: | chr3:75570419-75570780 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 104 |
| Conread position: | 131-467 |
| Cow position: | chr3:82657077-82657414 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 137-590 |
| Cow position: | chr3:21302445-21302885 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 38 |
| Conread position: | 152-602 |
| Cow position: | chr3:54960179-54959733 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 154-596 |
| Cow position: | chr3:77496816-77496357 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 187-590 |
| Cow position: | chr3:11385630-11385221 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 132 |
| Conread position: | 314-609 |
| Cow position: | chr3:17865418-17865122 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 408-588 |
| Cow position: | chr3:74408080-74407901 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 440-633 |
| Cow position: | chr3:38863541-38863351 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 160, 0 |
Show alignments to all cow chromosomes.