Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-298
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 158

Conread position: 1-353
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 15, 49

Conread position: 1-354
Cow position:
Alignm length: 364
Alignm identity: 249
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 151

Conread position: 1-392
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 27

Conread position: 1-414
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 314

Conread position: 1-442
Cow position:
Alignm length: 457
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 120

Conread position: 1-477
Cow position:
Alignm length: 492
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 50

Conread position: 1-485
Cow position:
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 1-503
Cow position:
Alignm length: 520
Alignm identity: 339
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 101, 52

Conread position: 1-550
Cow position:
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 179

Conread position: 1-561
Cow position:
Alignm length: 578
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 263

Conread position: 1-596
Cow position:
Alignm length: 622
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 262

Conread position: 1-604
Cow position:
Alignm length: 635
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 57

Conread position: 3-418
Cow position:
Alignm length: 436
Alignm identity: 285
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 82

Conread position: 3-601
Cow position:
Alignm length: 616
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 13-480
Cow position:
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 18-478
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 41-602
Cow position:
Alignm length: 578
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 27

Conread position: 43-361
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 37

Conread position: 45-602
Cow position:
Alignm length: 569
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 19

Conread position: 46-391
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 32, 97

Conread position: 46-411
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 39

Conread position: 60-516
Cow position:
Alignm length: 479
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 12

Conread position: 65-383
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 14

Conread position: 65-420
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 14

Conread position: 65-583
Cow position:
Alignm length: 529
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 14

Conread position: 71-602
Cow position:
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 201

Conread position: 72-343
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 165, 18

Conread position: 76-385
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 43

Conread position: 77-394
Cow position:
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 101

Conread position: 77-554
Cow position:
Alignm length: 495
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 73

Conread position: 77-556
Cow position:
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 50

Conread position: 79-287
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 80-223
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 80-243
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 80-279
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 133

Conread position: 80-287
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 80-307
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 153

Conread position: 80-308
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 159

Conread position: 80-309
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 107, 169

Conread position: 80-325
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 157, 44

Conread position: 80-330
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 159

Conread position: 80-355
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 103, 152

Conread position: 80-361
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 111, 39

Conread position: 80-419
Cow position:
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 213

Conread position: 80-419
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 80-444
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-444
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 183

Conread position: 80-445
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 52

Conread position: 80-471
Cow position:
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 101

Conread position: 80-486
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 80-499
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 113

Conread position: 80-533
Cow position:
Alignm length: 466
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 78

Conread position: 80-540
Cow position:
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 213

Conread position: 80-549
Cow position:
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 111

Conread position: 80-561
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 129

Conread position: 80-568
Cow position:
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 80-589
Cow position:
Alignm length: 534
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 80-589
Cow position:
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 52

Conread position: 80-601
Cow position:
Alignm length: 533
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-601
Cow position:
Alignm length: 532
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 47

Conread position: 80-602
Cow position:
Alignm length: 531
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 101

Conread position: 80-602
Cow position:
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 180

Conread position: 80-602
Cow position:
Alignm length: 552
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 236

Conread position: 80-633
Cow position:
Alignm length: 574
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 60

Conread position: 80-634
Cow position:
Alignm length: 571
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 38

Conread position: 81-284
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 65

Conread position: 81-292
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 177

Conread position: 81-352
Cow position:
Alignm length: 277
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 7

Conread position: 81-354
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 238

Conread position: 81-420
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 144

Conread position: 81-602
Cow position:
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 51

Conread position: 81-604
Cow position:
Alignm length: 565
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 196

Conread position: 82-602
Cow position:
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 100

Conread position: 83-421
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 100, 186

Conread position: 83-424
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 37

Conread position: 83-501
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 63

Conread position: 84-372
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 235

Conread position: 84-441
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 178

Conread position: 87-537
Cow position:
Alignm length: 467
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 135

Conread position: 88-557
Cow position:
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 63

Conread position: 89-596
Cow position:
Alignm length: 519
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 53

Conread position: 90-233
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 90-493
Cow position:
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 163

Conread position: 90-596
Cow position:
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 212

Conread position: 90-602
Cow position:
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 227

Conread position: 91-403
Cow position:
Alignm length: 328
Alignm identity: 235
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 106, 234

Conread position: 92-320
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 192

Conread position: 92-408
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 75

Conread position: 92-419
Cow position:
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 229

Conread position: 92-547
Cow position:
Alignm length: 466
Alignm identity: 302
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 161

Conread position: 92-553
Cow position:
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 167

Conread position: 92-589
Cow position:
Alignm length: 506
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 92-590
Cow position:
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 72

Conread position: 92-602
Cow position:
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 129

Conread position: 92-609
Cow position:
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 141

Conread position: 95-282
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 153

Conread position: 95-429
Cow position:
Alignm length: 347
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 24

Conread position: 95-500
Cow position:
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 138

Conread position: 96-420
Cow position:
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 137

Conread position: 96-431
Cow position:
Alignm length: 341
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 23

Conread position: 96-564
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 96-601
Cow position:
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 176

Conread position: 100-355
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 212

Conread position: 100-378
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 16

Conread position: 100-401
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 19

Conread position: 100-429
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 25, 19

Conread position: 100-429
Cow position:
Alignm length: 347
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 123

Conread position: 100-430
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 76

Conread position: 100-449
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 220

Conread position: 100-473
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 221

Conread position: 100-511
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 209

Conread position: 100-528
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 82, 185

Conread position: 100-552
Cow position:
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 100-563
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 81

Conread position: 100-588
Cow position:
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 153

Conread position: 100-602
Cow position:
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 19

Conread position: 100-633
Cow position:
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 196

Conread position: 101-549
Cow position:
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 152

Conread position: 101-588
Cow position:
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 214

Conread position: 101-602
Cow position:
Alignm length: 517
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 73

Conread position: 102-436
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 48

Conread position: 102-602
Cow position:
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 124

Conread position: 119-390
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 140

Conread position: 128-587
Cow position:
Alignm length: 467
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 101

Conread position: 146-299
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 149-410
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 56

Conread position: 149-501
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 149-589
Cow position:
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 48

Conread position: 149-590
Cow position:
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 150-377
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 111, 40

Conread position: 151-506
Cow position:
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 151

Conread position: 196-602
Cow position:
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 198-602
Cow position:
Alignm length: 422
Alignm identity: 290
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 120

Conread position: 272-603
Cow position:
Alignm length: 335
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 16

Conread position: 309-613
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.