Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-221
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 94

Conread position: 1-318
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 50, 140

Conread position: 1-322
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 80

Conread position: 1-357
Cow position:
Alignm length: 364
Alignm identity: 228
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 49

Conread position: 1-358
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 251

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 63

Conread position: 1-408
Cow position:
Alignm length: 421
Alignm identity: 283
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 25

Conread position: 1-418
Cow position:
Alignm length: 426
Alignm identity: 274
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 33

Conread position: 1-418
Cow position:
Alignm length: 432
Alignm identity: 283
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 196

Conread position: 1-425
Cow position:
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 1-483
Cow position:
Alignm length: 497
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 63

Conread position: 1-509
Cow position:
Alignm length: 536
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 1-583
Cow position:
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 1-601
Cow position:
Alignm length: 618
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 238

Conread position: 1-601
Cow position:
Alignm length: 620
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 1-601
Cow position:
Alignm length: 614
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 39

Conread position: 1-602
Cow position:
Alignm length: 625
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 158

Conread position: 2-602
Cow position:
Alignm length: 620
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 322

Conread position: 3-230
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 130

Conread position: 3-602
Cow position:
Alignm length: 622
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 85

Conread position: 46-366
Cow position:
Alignm length: 328
Alignm identity: 235
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 143, 16

Conread position: 46-601
Cow position:
Alignm length: 571
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 36

Conread position: 46-602
Cow position:
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 33

Conread position: 51-372
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 76

Conread position: 61-456
Cow position:
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 18

Conread position: 65-292
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 14

Conread position: 65-394
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 65-589
Cow position:
Alignm length: 538
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 14

Conread position: 65-589
Cow position:
Alignm length: 533
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 15

Conread position: 70-386
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 9

Conread position: 77-292
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 185

Conread position: 77-588
Cow position:
Alignm length: 528
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 156

Conread position: 77-601
Cow position:
Alignm length: 538
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 240

Conread position: 79-429
Cow position:
Alignm length: 364
Alignm identity: 245
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 110, 201

Conread position: 79-527
Cow position:
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 79-562
Cow position:
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 79-588
Cow position:
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 103

Conread position: 79-602
Cow position:
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 144

Conread position: 79-602
Cow position:
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 148

Conread position: 80-224
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 93

Conread position: 80-224
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 80-224
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 77

Conread position: 80-242
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 80-243
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 80-269
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 80-286
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 60

Conread position: 80-301
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 80-308
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 225

Conread position: 80-325
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 71

Conread position: 80-345
Cow position:
Alignm length: 276
Alignm identity: 189
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 140

Conread position: 80-353
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 153

Conread position: 80-354
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 153

Conread position: 80-356
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 115, 152

Conread position: 80-370
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 39

Conread position: 80-378
Cow position:
Alignm length: 311
Alignm identity: 227
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 21

Conread position: 80-381
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 41

Conread position: 80-389
Cow position:
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 181

Conread position: 80-391
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 235

Conread position: 80-391
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 223

Conread position: 80-393
Cow position:
Alignm length: 329
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 122, 234

Conread position: 80-394
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 111, 68

Conread position: 80-409
Cow position:
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 80-428
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 102, 226

Conread position: 80-428
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 30

Conread position: 80-429
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 231

Conread position: 80-449
Cow position:
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 239

Conread position: 80-453
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 132

Conread position: 80-457
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 151

Conread position: 80-469
Cow position:
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 80-501
Cow position:
Alignm length: 435
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 153

Conread position: 80-513
Cow position:
Alignm length: 441
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 52

Conread position: 80-514
Cow position:
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 80-546
Cow position:
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 190

Conread position: 80-586
Cow position:
Alignm length: 517
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 44

Conread position: 80-601
Cow position:
Alignm length: 531
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 149

Conread position: 80-602
Cow position:
Alignm length: 541
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 246

Conread position: 80-602
Cow position:
Alignm length: 535
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 134

Conread position: 80-606
Cow position:
Alignm length: 548
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 81-429
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 70

Conread position: 81-583
Cow position:
Alignm length: 517
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 83-426
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 35

Conread position: 84-575
Cow position:
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 220

Conread position: 89-243
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 141, 0

Conread position: 90-230
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 92-292
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 21

Conread position: 92-302
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 97

Conread position: 92-365
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 48

Conread position: 92-372
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 18

Conread position: 92-414
Cow position:
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 40

Conread position: 92-420
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 202

Conread position: 92-428
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 221

Conread position: 92-557
Cow position:
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 92-589
Cow position:
Alignm length: 512
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 222

Conread position: 92-608
Cow position:
Alignm length: 530
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 173

Conread position: 95-324
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 32

Conread position: 95-332
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 31

Conread position: 95-438
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 95-589
Cow position:
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 177

Conread position: 96-394
Cow position:
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 224

Conread position: 96-502
Cow position:
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 203

Conread position: 97-454
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 100-353
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 39

Conread position: 100-357
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 88, 78

Conread position: 100-364
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 151

Conread position: 100-382
Cow position:
Alignm length: 295
Alignm identity: 193
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 187

Conread position: 100-392
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 100-417
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 148

Conread position: 100-422
Cow position:
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 195

Conread position: 100-434
Cow position:
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 215

Conread position: 100-449
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 219

Conread position: 100-456
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 90, 131

Conread position: 100-491
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 153

Conread position: 100-493
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 215

Conread position: 100-588
Cow position:
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 216

Conread position: 100-603
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 106

Conread position: 101-394
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 216

Conread position: 102-602
Cow position:
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 218

Conread position: 104-589
Cow position:
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 124

Conread position: 105-295
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 12

Conread position: 106-430
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 39

Conread position: 108-588
Cow position:
Alignm length: 493
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 208

Conread position: 109-318
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 81, 147

Conread position: 113-304
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 129

Conread position: 123-590
Cow position:
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 184

Conread position: 128-329
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 126

Conread position: 128-549
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 130

Conread position: 138-523
Cow position:
Alignm length: 391
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 5

Conread position: 149-404
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 145

Conread position: 149-417
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 111

Conread position: 149-590
Cow position:
Alignm length: 451
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 68

Conread position: 193-545
Cow position:
Alignm length: 360
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 194-405
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.