Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-229
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 82

Conread position: 1-334
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 80

Conread position: 1-384
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 319

Conread position: 1-394
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 51, 72

Conread position: 1-402
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 250

Conread position: 1-420
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 76

Conread position: 1-424
Cow position:
Alignm length: 435
Alignm identity: 291
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 63

Conread position: 1-560
Cow position:
Alignm length: 575
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 51

Conread position: 1-580
Cow position:
Alignm length: 601
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 38

Conread position: 1-589
Cow position:
Alignm length: 621
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 1-590
Cow position:
Alignm length: 605
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 52

Conread position: 1-602
Cow position:
Alignm length: 622
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 1-602
Cow position:
Alignm length: 619
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 177

Conread position: 1-603
Cow position:
Alignm length: 639
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 241

Conread position: 1-604
Cow position:
Alignm length: 634
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 92

Conread position: 31-380
Cow position:
Alignm length: 361
Alignm identity: 234
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 165, 19

Conread position: 46-345
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 46-362
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 43

Conread position: 46-439
Cow position:
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 201

Conread position: 46-444
Cow position:
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 61-420
Cow position:
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 61-602
Cow position:
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 18

Conread position: 65-223
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 65-369
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 14

Conread position: 71-430
Cow position:
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 14

Conread position: 72-243
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 20

Conread position: 77-420
Cow position:
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 92

Conread position: 79-391
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 48

Conread position: 79-398
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 12

Conread position: 80-217
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 80-237
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 80-250
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 80-282
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 142

Conread position: 80-287
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 180

Conread position: 80-293
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 80-301
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 67

Conread position: 80-308
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 152

Conread position: 80-309
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 80-309
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 153

Conread position: 80-319
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 168

Conread position: 80-334
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 48

Conread position: 80-358
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 232

Conread position: 80-362
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 19

Conread position: 80-365
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 183

Conread position: 80-390
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 238

Conread position: 80-390
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 62

Conread position: 80-393
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 26

Conread position: 80-397
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 39

Conread position: 80-404
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 116, 60

Conread position: 80-420
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 39

Conread position: 80-421
Cow position:
Alignm length: 352
Alignm identity: 233
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 185

Conread position: 80-424
Cow position:
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 47

Conread position: 80-426
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 47

Conread position: 80-429
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 236

Conread position: 80-449
Cow position:
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 33

Conread position: 80-508
Cow position:
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-540
Cow position:
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 80-554
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 111

Conread position: 80-555
Cow position:
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 72

Conread position: 80-587
Cow position:
Alignm length: 519
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 57

Conread position: 80-588
Cow position:
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 120

Conread position: 80-589
Cow position:
Alignm length: 542
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 175

Conread position: 80-599
Cow position:
Alignm length: 543
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 136

Conread position: 80-602
Cow position:
Alignm length: 540
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 242

Conread position: 80-602
Cow position:
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 229

Conread position: 80-602
Cow position:
Alignm length: 544
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 80-633
Cow position:
Alignm length: 591
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 557

Conread position: 81-424
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 182

Conread position: 81-440
Cow position:
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 244

Conread position: 81-550
Cow position:
Alignm length: 472
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 38

Conread position: 82-424
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 87

Conread position: 83-240
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 83-271
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 177

Conread position: 83-403
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 164

Conread position: 83-429
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 141

Conread position: 89-380
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 222

Conread position: 90-489
Cow position:
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 133

Conread position: 90-533
Cow position:
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 103

Conread position: 92-275
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 27

Conread position: 92-285
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 50

Conread position: 92-342
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 217

Conread position: 92-350
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 143

Conread position: 92-357
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 229

Conread position: 92-359
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 183

Conread position: 92-404
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 114

Conread position: 92-552
Cow position:
Alignm length: 464
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 77

Conread position: 92-602
Cow position:
Alignm length: 528
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 232

Conread position: 92-602
Cow position:
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 164

Conread position: 95-327
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 80

Conread position: 95-386
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 37

Conread position: 95-418
Cow position:
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 125

Conread position: 95-438
Cow position:
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 79

Conread position: 95-601
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 223

Conread position: 96-376
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 220

Conread position: 96-446
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 98-413
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 21

Conread position: 100-354
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 100-361
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 145, 96

Conread position: 100-404
Cow position:
Alignm length: 319
Alignm identity: 218
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 90, 215

Conread position: 100-416
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 224

Conread position: 100-424
Cow position:
Alignm length: 336
Alignm identity: 224
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 110

Conread position: 100-562
Cow position:
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 214

Conread position: 100-633
Cow position:
Alignm length: 562
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 225

Conread position: 101-308
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 90

Conread position: 101-373
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 206

Conread position: 101-590
Cow position:
Alignm length: 515
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 331

Conread position: 102-549
Cow position:
Alignm length: 473
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 146

Conread position: 103-590
Cow position:
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 87

Conread position: 104-394
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 5

Conread position: 106-552
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 207

Conread position: 109-564
Cow position:
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 39

Conread position: 113-414
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 141

Conread position: 113-596
Cow position:
Alignm length: 498
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 166

Conread position: 114-330
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 107

Conread position: 117-590
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 127-602
Cow position:
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 5

Conread position: 128-428
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 133

Conread position: 129-322
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 133-606
Cow position:
Alignm length: 491
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 102

Conread position: 143-418
Cow position:
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 172

Conread position: 149-421
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 107

Conread position: 166-499
Cow position:
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 186-394
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 123

Conread position: 189-419
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 64

Conread position: 194-424
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.