Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-324
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 121

Conread position: 1-355
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 223

Conread position: 1-428
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 27

Conread position: 1-549
Cow position:
Alignm length: 569
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 1-552
Cow position:
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 154

Conread position: 1-561
Cow position:
Alignm length: 570
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 50

Conread position: 1-588
Cow position:
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 1-602
Cow position:
Alignm length: 628
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 243

Conread position: 1-602
Cow position:
Alignm length: 611
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 36

Conread position: 1-602
Cow position:
Alignm length: 613
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 1-602
Cow position:
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 1-627
Cow position:
Alignm length: 652
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 65

Conread position: 3-602
Cow position:
Alignm length: 621
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 5-287
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 46

Conread position: 11-230
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 69

Conread position: 31-428
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 43-243
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 37

Conread position: 43-588
Cow position:
Alignm length: 555
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 45-399
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 7, 33

Conread position: 53-557
Cow position:
Alignm length: 514
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 26

Conread position: 53-602
Cow position:
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 60-379
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 130, 19

Conread position: 64-384
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 9

Conread position: 65-253
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 65-288
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 180, 15

Conread position: 65-428
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 65-433
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 75-522
Cow position:
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 49

Conread position: 77-401
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 48

Conread position: 78-465
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 78-490
Cow position:
Alignm length: 435
Alignm identity: 289
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 14

Conread position: 78-528
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 79-318
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 21

Conread position: 79-353
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 39

Conread position: 80-264
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 159

Conread position: 80-284
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 47

Conread position: 80-287
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 72

Conread position: 80-309
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 80-318
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 234

Conread position: 80-330
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 236

Conread position: 80-334
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 9, 153

Conread position: 80-344
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 115

Conread position: 80-355
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 168

Conread position: 80-357
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 110, 167

Conread position: 80-360
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 227

Conread position: 80-368
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 237

Conread position: 80-371
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 227

Conread position: 80-376
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 234

Conread position: 80-378
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 242

Conread position: 80-391
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 74

Conread position: 80-392
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 111, 131

Conread position: 80-394
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 39

Conread position: 80-404
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 46, 39

Conread position: 80-409
Cow position:
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 80-418
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 47

Conread position: 80-419
Cow position:
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 51

Conread position: 80-424
Cow position:
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 80-424
Cow position:
Alignm length: 358
Alignm identity: 247
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 112, 86

Conread position: 80-428
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 152

Conread position: 80-442
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 31

Conread position: 80-455
Cow position:
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 26

Conread position: 80-486
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 192

Conread position: 80-523
Cow position:
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 62

Conread position: 80-547
Cow position:
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 67

Conread position: 80-554
Cow position:
Alignm length: 484
Alignm identity: 327
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 107, 152

Conread position: 80-587
Cow position:
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 134

Conread position: 80-597
Cow position:
Alignm length: 529
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 143

Conread position: 80-602
Cow position:
Alignm length: 547
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 244

Conread position: 80-602
Cow position:
Alignm length: 546
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 187

Conread position: 80-602
Cow position:
Alignm length: 541
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 144

Conread position: 80-602
Cow position:
Alignm length: 537
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 147

Conread position: 80-602
Cow position:
Alignm length: 532
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 108

Conread position: 80-603
Cow position:
Alignm length: 536
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 110

Conread position: 81-602
Cow position:
Alignm length: 539
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 238

Conread position: 81-604
Cow position:
Alignm length: 541
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 105

Conread position: 82-349
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 108, 216

Conread position: 83-472
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 225

Conread position: 83-561
Cow position:
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 99

Conread position: 84-426
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 230

Conread position: 84-602
Cow position:
Alignm length: 533
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 54

Conread position: 85-434
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 39

Conread position: 90-301
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 176

Conread position: 90-557
Cow position:
Alignm length: 475
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 142

Conread position: 90-583
Cow position:
Alignm length: 507
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 115

Conread position: 91-422
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 241

Conread position: 91-501
Cow position:
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 227

Conread position: 92-289
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 92-376
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 101

Conread position: 92-412
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 55

Conread position: 92-441
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 96, 227

Conread position: 92-455
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 222

Conread position: 92-601
Cow position:
Alignm length: 525
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 226

Conread position: 92-638
Cow position:
Alignm length: 559
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 95-319
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 142, 158

Conread position: 95-552
Cow position:
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 199

Conread position: 95-586
Cow position:
Alignm length: 503
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 33

Conread position: 95-589
Cow position:
Alignm length: 512
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 16

Conread position: 97-313
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 65

Conread position: 100-353
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 167

Conread position: 100-371
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 202

Conread position: 100-378
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 161

Conread position: 100-394
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 194

Conread position: 100-404
Cow position:
Alignm length: 314
Alignm identity: 209
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 159

Conread position: 100-493
Cow position:
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 126

Conread position: 100-512
Cow position:
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 135

Conread position: 100-526
Cow position:
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 122

Conread position: 100-527
Cow position:
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 213

Conread position: 100-536
Cow position:
Alignm length: 452
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 216

Conread position: 100-602
Cow position:
Alignm length: 520
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 27

Conread position: 100-602
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 212

Conread position: 101-561
Cow position:
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 226

Conread position: 101-602
Cow position:
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 212

Conread position: 102-486
Cow position:
Alignm length: 392
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 89

Conread position: 104-425
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 220

Conread position: 105-587
Cow position:
Alignm length: 493
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 58

Conread position: 107-560
Cow position:
Alignm length: 466
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 113-434
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 122

Conread position: 120-590
Cow position:
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 146

Conread position: 128-381
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 180

Conread position: 129-596
Cow position:
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 139

Conread position: 129-596
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 139

Conread position: 149-608
Cow position:
Alignm length: 467
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 40

Conread position: 162-421
Cow position:
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 186-420
Cow position:
Alignm length: 240
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 186-603
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 130

Conread position: 187-456
Cow position:
Alignm length: 275
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 121

Conread position: 191-418
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 67, 45

Conread position: 195-532
Cow position:
Alignm length: 340
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 71

Conread position: 411-590
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 29

Conread position: 418-630
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 120

Show alignments to all cow chromosomes.