Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-301
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 239

Conread position: 1-343
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 333

Conread position: 1-363
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 191, 68

Conread position: 1-428
Cow position:
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 1-448
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 187

Conread position: 1-504
Cow position:
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 127

Conread position: 1-538
Cow position:
Alignm length: 549
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 1-589
Cow position:
Alignm length: 614
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 275

Conread position: 1-609
Cow position:
Alignm length: 623
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 42

Conread position: 2-320
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 84

Conread position: 3-602
Cow position:
Alignm length: 634
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 43-424
Cow position:
Alignm length: 398
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 38

Conread position: 45-602
Cow position:
Alignm length: 582
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 34

Conread position: 46-223
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 153, 33

Conread position: 49-287
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 31

Conread position: 49-487
Cow position:
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 53-325
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 148, 26

Conread position: 63-468
Cow position:
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 65-562
Cow position:
Alignm length: 513
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 65-565
Cow position:
Alignm length: 511
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 70-390
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 175, 9

Conread position: 72-523
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 227

Conread position: 75-602
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 200

Conread position: 76-481
Cow position:
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 18

Conread position: 78-502
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 235

Conread position: 80-224
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 80-235
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 80-243
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 80-292
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 21

Conread position: 80-314
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 75

Conread position: 80-318
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 80-320
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 236

Conread position: 80-329
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 167, 103

Conread position: 80-339
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 239

Conread position: 80-377
Cow position:
Alignm length: 302
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 47

Conread position: 80-394
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 117

Conread position: 80-394
Cow position:
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 201

Conread position: 80-404
Cow position:
Alignm length: 339
Alignm identity: 240
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 50

Conread position: 80-412
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 227, 96

Conread position: 80-413
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 99, 231

Conread position: 80-413
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 48, 39

Conread position: 80-416
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 43

Conread position: 80-424
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 188

Conread position: 80-447
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 237

Conread position: 80-451
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 102

Conread position: 80-454
Cow position:
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 38

Conread position: 80-475
Cow position:
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 137

Conread position: 80-476
Cow position:
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 217

Conread position: 80-522
Cow position:
Alignm length: 455
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 60

Conread position: 80-528
Cow position:
Alignm length: 464
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-556
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-588
Cow position:
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 201

Conread position: 80-588
Cow position:
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 80-589
Cow position:
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 241

Conread position: 80-589
Cow position:
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 188

Conread position: 80-601
Cow position:
Alignm length: 547
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 183

Conread position: 80-602
Cow position:
Alignm length: 538
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 236

Conread position: 80-602
Cow position:
Alignm length: 551
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 235

Conread position: 80-603
Cow position:
Alignm length: 541
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 215

Conread position: 80-604
Cow position:
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 83

Conread position: 80-630
Cow position:
Alignm length: 570
Alignm identity: 369
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 116, 111

Conread position: 81-308
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 185

Conread position: 81-338
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 135

Conread position: 81-583
Cow position:
Alignm length: 517
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 24

Conread position: 82-405
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 9

Conread position: 82-486
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 233

Conread position: 83-292
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 108, 172

Conread position: 83-324
Cow position:
Alignm length: 252
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 83-549
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 36

Conread position: 83-575
Cow position:
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 62

Conread position: 84-602
Cow position:
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 149

Conread position: 90-378
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 218

Conread position: 90-389
Cow position:
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 21

Conread position: 91-381
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 212

Conread position: 92-326
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 105, 224

Conread position: 92-351
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 163

Conread position: 92-353
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 170

Conread position: 92-403
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 86

Conread position: 92-424
Cow position:
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 100

Conread position: 92-424
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 225

Conread position: 92-426
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 31

Conread position: 92-480
Cow position:
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 164

Conread position: 92-485
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 92-504
Cow position:
Alignm length: 423
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 50

Conread position: 92-602
Cow position:
Alignm length: 521
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 169

Conread position: 95-441
Cow position:
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 86

Conread position: 95-461
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 85

Conread position: 96-540
Cow position:
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 127

Conread position: 99-364
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 51

Conread position: 100-354
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 20

Conread position: 100-363
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 160

Conread position: 100-427
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 19

Conread position: 100-438
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 148, 90

Conread position: 100-561
Cow position:
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 118

Conread position: 100-562
Cow position:
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 221

Conread position: 100-583
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 154

Conread position: 100-602
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 166

Conread position: 101-377
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 101-426
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 210

Conread position: 103-374
Cow position:
Alignm length: 276
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 93, 136

Conread position: 103-498
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 206

Conread position: 107-400
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 115-602
Cow position:
Alignm length: 503
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 127-583
Cow position:
Alignm length: 468
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 129-596
Cow position:
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 139

Conread position: 144-603
Cow position:
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 172

Conread position: 148-288
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 149-345
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 98

Conread position: 166-423
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 27, 153

Conread position: 183-590
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 414-596
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 154, 40

Conread position: 418-583
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 427-633
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 45

Show alignments to all cow chromosomes.