Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-201
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 85

Conread position: 1-253
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 1-285
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 15

Conread position: 1-341
Cow position:
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 269

Conread position: 1-360
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 221

Conread position: 1-409
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 50

Conread position: 1-415
Cow position:
Alignm length: 428
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 25

Conread position: 1-417
Cow position:
Alignm length: 433
Alignm identity: 284
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 47

Conread position: 1-418
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 50

Conread position: 1-424
Cow position:
Alignm length: 435
Alignm identity: 287
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 63

Conread position: 1-513
Cow position:
Alignm length: 534
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 79

Conread position: 43-235
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 28

Conread position: 49-224
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 31

Conread position: 49-420
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 58-384
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 139, 262

Conread position: 61-318
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 18

Conread position: 65-523
Cow position:
Alignm length: 468
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 65-547
Cow position:
Alignm length: 490
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 66-507
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 246

Conread position: 70-493
Cow position:
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 17

Conread position: 78-561
Cow position:
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 237

Conread position: 79-392
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 235

Conread position: 79-442
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 79-529
Cow position:
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 224

Conread position: 79-596
Cow position:
Alignm length: 529
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 12

Conread position: 79-600
Cow position:
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 40

Conread position: 80-249
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 157, 101

Conread position: 80-275
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 80-277
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 111

Conread position: 80-297
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 111

Conread position: 80-303
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 80-308
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 69

Conread position: 80-317
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 239

Conread position: 80-329
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 112, 96

Conread position: 80-333
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 68, 153

Conread position: 80-333
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 235

Conread position: 80-350
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 72

Conread position: 80-377
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 229

Conread position: 80-379
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 159

Conread position: 80-394
Cow position:
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 216

Conread position: 80-394
Cow position:
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 47

Conread position: 80-404
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 320

Conread position: 80-408
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 108, 223

Conread position: 80-418
Cow position:
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 62

Conread position: 80-418
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 102

Conread position: 80-419
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 39

Conread position: 80-421
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 80-423
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 233

Conread position: 80-424
Cow position:
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 180

Conread position: 80-425
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 111, 133

Conread position: 80-450
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 174

Conread position: 80-518
Cow position:
Alignm length: 464
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 37

Conread position: 80-535
Cow position:
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-536
Cow position:
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 151

Conread position: 80-538
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 113

Conread position: 80-545
Cow position:
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 80-549
Cow position:
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-561
Cow position:
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 102

Conread position: 80-578
Cow position:
Alignm length: 515
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 44

Conread position: 80-578
Cow position:
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 132

Conread position: 80-586
Cow position:
Alignm length: 521
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 147

Conread position: 80-601
Cow position:
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 152

Conread position: 80-601
Cow position:
Alignm length: 531
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 98

Conread position: 80-602
Cow position:
Alignm length: 535
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 182

Conread position: 80-602
Cow position:
Alignm length: 540
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 204

Conread position: 80-602
Cow position:
Alignm length: 557
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 150

Conread position: 80-602
Cow position:
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-602
Cow position:
Alignm length: 535
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-602
Cow position:
Alignm length: 537
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 163

Conread position: 80-602
Cow position:
Alignm length: 541
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 80-602
Cow position:
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 215

Conread position: 80-604
Cow position:
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 112

Conread position: 80-604
Cow position:
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 102

Conread position: 81-254
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 165

Conread position: 81-316
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 238

Conread position: 81-379
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 235

Conread position: 81-602
Cow position:
Alignm length: 535
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 181

Conread position: 81-607
Cow position:
Alignm length: 539
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 92

Conread position: 82-540
Cow position:
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 83-586
Cow position:
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 173

Conread position: 83-602
Cow position:
Alignm length: 537
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 83-602
Cow position:
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 91

Conread position: 85-390
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 84, 228

Conread position: 85-529
Cow position:
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 34

Conread position: 89-481
Cow position:
Alignm length: 408
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 38

Conread position: 90-424
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 100, 151

Conread position: 90-544
Cow position:
Alignm length: 468
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 176

Conread position: 90-562
Cow position:
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 92-230
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 92-329
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 14

Conread position: 92-381
Cow position:
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 188

Conread position: 92-429
Cow position:
Alignm length: 345
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 32, 27

Conread position: 92-432
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 223

Conread position: 92-523
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 212

Conread position: 92-587
Cow position:
Alignm length: 519
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 236

Conread position: 92-602
Cow position:
Alignm length: 525
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 175

Conread position: 95-424
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 31, 27

Conread position: 96-329
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 103, 152

Conread position: 100-299
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 116

Conread position: 100-364
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 140

Conread position: 100-366
Cow position:
Alignm length: 269
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 91

Conread position: 100-384
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 87

Conread position: 100-386
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 75

Conread position: 100-387
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 91, 210

Conread position: 100-388
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 145, 104

Conread position: 100-394
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 219

Conread position: 100-413
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 105

Conread position: 100-419
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 112

Conread position: 100-420
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 228

Conread position: 100-421
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 161

Conread position: 100-442
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 96, 198

Conread position: 100-445
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 130

Conread position: 100-458
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 166

Conread position: 100-475
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 226

Conread position: 100-478
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 225

Conread position: 100-541
Cow position:
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 216

Conread position: 100-557
Cow position:
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 158

Conread position: 100-565
Cow position:
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 201

Conread position: 100-577
Cow position:
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 214

Conread position: 100-586
Cow position:
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 218

Conread position: 100-590
Cow position:
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 106

Conread position: 100-603
Cow position:
Alignm length: 534
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 204

Conread position: 100-616
Cow position:
Alignm length: 529
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 198

Conread position: 101-420
Cow position:
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 219

Conread position: 101-590
Cow position:
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 182

Conread position: 102-388
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 208

Conread position: 102-394
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 216

Conread position: 111-417
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 85, 202

Conread position: 128-424
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 177

Conread position: 128-426
Cow position:
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 138

Conread position: 128-602
Cow position:
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 191

Conread position: 137-508
Cow position:
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 180

Conread position: 149-487
Cow position:
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 87

Conread position: 150-405
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 53, 87

Conread position: 150-596
Cow position:
Alignm length: 460
Alignm identity: 305
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 118

Conread position: 187-554
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 66

Conread position: 195-440
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 31

Conread position: 398-604
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Show alignments to all cow chromosomes.