Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-332 |
| Cow position: | chr11:7373812-7374132 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 1-335 |
| Cow position: | chr11:2834637-2834963 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 119 |
| Conread position: | 1-335 |
| Cow position: | chr11:32078419-32078094 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 223 |
| Conread position: | 1-335 |
| Cow position: | chr11:33602269-33601943 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 219 |
| Conread position: | 1-335 |
| Cow position: | chr11:44580869-44580545 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 166 |
| Conread position: | 2-332 |
| Cow position: | chr11:74928163-74928481 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-335 |
| Cow position: | chr11:14735019-14734694 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 2-335 |
| Cow position: | chr11:17834212-17833892 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 2-337 |
| Cow position: | chr11:13045376-13045053 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 8-312 |
| Cow position: | chr11:38600570-38600275 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-326 |
| Cow position: | chr11:9154820-9154512 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 212 |
| Conread position: | 8-326 |
| Cow position: | chr11:66945964-66945658 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 8-328 |
| Cow position: | chr11:35332450-35332140 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 8-330 |
| Cow position: | chr11:25809376-25809063 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-331 |
| Cow position: | chr11:10215241-10214926 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 8-335 |
| Cow position: | chr11:3495410-3495728 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr11:10958188-10958516 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 145 |
| Conread position: | 9-331 |
| Cow position: | chr11:44874842-44875159 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 55 |
| Conread position: | 9-335 |
| Cow position: | chr11:66568422-66568737 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 9-335 |
| Cow position: | chr11:84740451-84740762 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 14-331 |
| Cow position: | chr11:31928841-31929147 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 155, 178 |
| Conread position: | 24-335 |
| Cow position: | chr11:44154698-44154393 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 182 |
| Conread position: | 25-328 |
| Cow position: | chr11:18147154-18146866 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 29-329 |
| Cow position: | chr11:73467032-73466741 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 29-335 |
| Cow position: | chr11:76371677-76371380 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 30-335 |
| Cow position: | chr11:66731533-66731828 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 31-335 |
| Cow position: | chr11:63861246-63860950 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 34-333 |
| Cow position: | chr11:76565843-76566133 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 38-330 |
| Cow position: | chr11:260737-260465 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 46-335 |
| Cow position: | chr11:39600456-39600177 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 59-335 |
| Cow position: | chr11:59871232-59871501 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 183 |
| Conread position: | 62-332 |
| Cow position: | chr11:38640372-38640633 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 85-336 |
| Cow position: | chr11:1505552-1505311 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 86-332 |
| Cow position: | chr11:75511747-75511510 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 152 |
| Conread position: | 104-335 |
| Cow position: | chr11:85731501-85731280 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 109-332 |
| Cow position: | chr11:56652987-56652765 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 123-335 |
| Cow position: | chr11:13063126-13062924 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 142-332 |
| Cow position: | chr11:72368554-72368735 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 144-332 |
| Cow position: | chr11:14650269-14650452 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.