Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-335 |
| Cow position: | chr15:313491-313166 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 32 |
| Conread position: | 1-335 |
| Cow position: | chr15:3258198-3257874 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 1-335 |
| Cow position: | chr15:8029707-8029374 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 231 |
| Conread position: | 1-335 |
| Cow position: | chr15:30726935-30726617 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 2-326 |
| Cow position: | chr15:14573991-14573678 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 2-330 |
| Cow position: | chr15:36670479-36670798 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 2-330 |
| Cow position: | chr15:52440451-52440767 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 2-335 |
| Cow position: | chr15:13682648-13682970 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 81 |
| Conread position: | 8-324 |
| Cow position: | chr15:4924481-4924787 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 8-332 |
| Cow position: | chr15:6487775-6488090 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-332 |
| Cow position: | chr15:8753193-8753509 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 116 |
| Conread position: | 8-335 |
| Cow position: | chr15:443472-443153 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 217 |
| Conread position: | 8-335 |
| Cow position: | chr15:4219595-4219280 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:4653787-4654103 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:4788480-4788164 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:5982961-5983274 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:7236625-7236939 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 20 |
| Conread position: | 8-335 |
| Cow position: | chr15:7318884-7319202 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:7840652-7840968 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:12418394-12418074 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 218 |
| Conread position: | 8-335 |
| Cow position: | chr15:15344787-15344469 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:20457368-20457683 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 8-335 |
| Cow position: | chr15:28487811-28487494 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:32065937-32065623 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:34517454-34517773 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 217 |
| Conread position: | 8-335 |
| Cow position: | chr15:35750979-35750661 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:38982977-38983294 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 8-335 |
| Cow position: | chr15:51220057-51220376 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 216 |
| Conread position: | 8-336 |
| Cow position: | chr15:4814878-4815195 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 9-330 |
| Cow position: | chr15:13389052-13388743 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-335 |
| Cow position: | chr15:32702420-32702095 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 9-336 |
| Cow position: | chr15:16341347-16341030 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 142, 84 |
| Conread position: | 10-335 |
| Cow position: | chr15:36941068-36940748 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 99 |
| Conread position: | 10-337 |
| Cow position: | chr15:51227446-51227761 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 20-335 |
| Cow position: | chr15:5497381-5497695 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 145, 226 |
| Conread position: | 28-330 |
| Cow position: | chr15:8358986-8359279 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 179, 19 |
| Conread position: | 29-331 |
| Cow position: | chr15:49198771-49199065 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 29-336 |
| Cow position: | chr15:8628649-8628945 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 31-332 |
| Cow position: | chr15:4768520-4768813 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 194 |
| Conread position: | 31-335 |
| Cow position: | chr15:6164753-6164457 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 190 |
| Conread position: | 31-335 |
| Cow position: | chr15:6589595-6589298 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 50-332 |
| Cow position: | chr15:1600946-1601216 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 50-335 |
| Cow position: | chr15:36623301-36623026 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 58-335 |
| Cow position: | chr15:6119754-6120021 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 67-335 |
| Cow position: | chr15:4641579-4641837 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 71-332 |
| Cow position: | chr15:4688411-4688663 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 73-332 |
| Cow position: | chr15:41359389-41359636 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 97-335 |
| Cow position: | chr15:20405211-20404982 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 140-335 |
| Cow position: | chr15:32858314-32858500 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.