Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-328 |
| Cow position: | chr21:3781600-3781918 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 1-329 |
| Cow position: | chr21:22854745-22855064 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 225 |
| Conread position: | 1-333 |
| Cow position: | chr21:3587241-3586924 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-335 |
| Cow position: | chr21:26400941-26400616 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 2-330 |
| Cow position: | chr21:38026199-38026519 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 223 |
| Conread position: | 7-333 |
| Cow position: | chr21:4566821-4567139 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 84 |
| Conread position: | 8-320 |
| Cow position: | chr21:4586869-4586567 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-325 |
| Cow position: | chr21:24298373-24298068 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 8-330 |
| Cow position: | chr21:37355142-37354834 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 8-333 |
| Cow position: | chr21:22943647-22943965 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 246, 69 |
| Conread position: | 8-335 |
| Cow position: | chr21:2513679-2513998 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 217 |
| Conread position: | 8-335 |
| Cow position: | chr21:11508769-11509089 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 218 |
| Conread position: | 8-335 |
| Cow position: | chr21:13314289-13314604 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 239, 26 |
| Conread position: | 8-335 |
| Cow position: | chr21:22750620-22750304 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 8-335 |
| Cow position: | chr21:34656788-34657107 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-335 |
| Cow position: | chr21:47648170-47648488 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr21:49648136-49647815 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 181, 13 |
| Conread position: | 9-324 |
| Cow position: | chr21:17143511-17143817 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 9-335 |
| Cow position: | chr21:2419031-2419349 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 10-335 |
| Cow position: | chr21:26699831-26699518 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 14-335 |
| Cow position: | chr21:4864509-4864197 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 29-335 |
| Cow position: | chr21:15548057-15547760 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 31-289 |
| Cow position: | chr21:4880582-4880332 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 19, 194 |
| Conread position: | 31-335 |
| Cow position: | chr21:1285402-1285107 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 32-332 |
| Cow position: | chr21:44567-44847 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 49-332 |
| Cow position: | chr21:22463059-22463336 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 171 |
| Conread position: | 50-313 |
| Cow position: | chr21:4133536-4133791 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 50-332 |
| Cow position: | chr21:13162316-13162583 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 50-335 |
| Cow position: | chr21:4813466-4813190 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 93-335 |
| Cow position: | chr21:7155307-7155545 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 99-335 |
| Cow position: | chr21:18979724-18979954 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 122 |
Show alignments to all cow chromosomes.