Cow genome map


           Conread name:
           Ova1-OVR010008E02
        

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 141
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 220
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 223
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               79, 220
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 66
               

               Conread position:
               2-337
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 234
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               8-331
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 218
               

               Conread position:
               8-332
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               160, 76
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 227
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 218
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 215
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               8-336
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 47
               

               Conread position:
               9-308
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 187
               

               Conread position:
               9-335
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               9-335
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 0
               

               Conread position:
               9-335
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               9-335
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 212
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               20-307
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               21-335
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               25-335
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               29-335
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               146, 39
               

               Conread position:
               29-335
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               31-330
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               32-333
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 28
               

               Conread position:
               36-335
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               46-332
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               54-332
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               101, 148
               

               Conread position:
               58-328
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               58-331
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               58-333
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               117, 148
               

               Conread position:
               68-332
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               121, 80
               

               Conread position:
               68-335
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               71-323
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 159
               

               Conread position:
               78-335
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               86-335
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 141
               

               Conread position:
               107-330
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               108-328
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               116-328
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               117-323
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 109
               
Show alignments to all cow chromosomes.