Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-332 |
| Cow position: | chr4:1028844-1028518 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 228 |
| Conread position: | 1-332 |
| Cow position: | chr4:44900654-44900977 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 1-333 |
| Cow position: | chr4:18100529-18100204 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-335 |
| Cow position: | chr4:3449176-3449501 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr4:36026890-36026565 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr4:43317269-43316944 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 176 |
| Conread position: | 1-335 |
| Cow position: | chr4:60626139-60625818 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 261, 123 |
| Conread position: | 2-332 |
| Cow position: | chr4:64038617-64038953 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 234 |
| Conread position: | 7-332 |
| Cow position: | chr4:37702657-37702958 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 105 |
| Conread position: | 7-338 |
| Cow position: | chr4:26467643-26467957 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 34 |
| Conread position: | 8-315 |
| Cow position: | chr4:67681607-67681297 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 8-328 |
| Cow position: | chr4:41977259-41976947 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 185 |
| Conread position: | 8-329 |
| Cow position: | chr4:63820656-63820960 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 8-332 |
| Cow position: | chr4:5579404-5579090 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:6266826-6266508 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:7215383-7215071 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:10884025-10884344 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:16061668-16062001 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:17834467-17834142 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 223 |
| Conread position: | 8-335 |
| Cow position: | chr4:25597099-25596780 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:33021245-33020927 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr4:40438138-40437821 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 8-335 |
| Cow position: | chr4:43897317-43897002 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 30 |
| Conread position: | 8-335 |
| Cow position: | chr4:61241669-61241988 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 9-332 |
| Cow position: | chr4:17920570-17920251 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 239 |
| Conread position: | 9-335 |
| Cow position: | chr4:8673122-8673442 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 10-330 |
| Cow position: | chr4:67601272-67600966 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 11-327 |
| Cow position: | chr4:68809527-68809838 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 29-329 |
| Cow position: | chr4:33646158-33645883 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 29-335 |
| Cow position: | chr4:28834971-28835267 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 32 |
| Conread position: | 31-329 |
| Cow position: | chr4:5611588-5611300 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 165 |
| Conread position: | 36-335 |
| Cow position: | chr4:4674157-4673873 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 39-332 |
| Cow position: | chr4:64799530-64799821 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 120, 206 |
| Conread position: | 50-335 |
| Cow position: | chr4:31562798-31562524 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 64-335 |
| Cow position: | chr4:57987187-57987449 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 87-327 |
| Cow position: | chr4:34385113-34384876 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 184, 20 |
| Conread position: | 93-335 |
| Cow position: | chr4:27336685-27336918 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 95-324 |
| Cow position: | chr4:24021984-24021769 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 99-335 |
| Cow position: | chr4:44733104-44733331 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 233-332 |
| Cow position: | chr4:27539272-27539371 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.