Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-330 |
| Cow position: | chr6:67097927-67098254 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 1-331 |
| Cow position: | chr6:42266355-42266679 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 1-335 |
| Cow position: | chr6:8204799-8205136 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 188 |
| Conread position: | 1-335 |
| Cow position: | chr6:8756198-8755873 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr6:39911945-39912269 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-335 |
| Cow position: | chr6:41231108-41231431 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-335 |
| Cow position: | chr6:60875917-60876244 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 223 |
| Conread position: | 2-297 |
| Cow position: | chr6:18496939-18497225 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 2-330 |
| Cow position: | chr6:15924969-15924650 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 2-335 |
| Cow position: | chr6:9840522-9840185 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 231 |
| Conread position: | 2-335 |
| Cow position: | chr6:55473943-55474251 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 263, 18 |
| Conread position: | 2-335 |
| Cow position: | chr6:67266889-67267210 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 7-332 |
| Cow position: | chr6:3927771-3928089 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 218 |
| Conread position: | 7-335 |
| Cow position: | chr6:28550450-28550117 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 8-329 |
| Cow position: | chr6:35724029-35724333 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 12 |
| Conread position: | 8-332 |
| Cow position: | chr6:182917-182599 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 219 |
| Conread position: | 8-335 |
| Cow position: | chr6:48946-48628 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:3485772-3485454 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 211 |
| Conread position: | 8-335 |
| Cow position: | chr6:3886880-3886562 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:5947149-5946832 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 83 |
| Conread position: | 8-335 |
| Cow position: | chr6:11722568-11722252 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:16050664-16050346 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:28171533-28171848 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 26 |
| Conread position: | 8-335 |
| Cow position: | chr6:40974812-40975130 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 213 |
| Conread position: | 8-335 |
| Cow position: | chr6:43798285-43797968 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:51717172-51717500 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 254 |
| Conread position: | 8-335 |
| Cow position: | chr6:51895454-51895142 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 8-335 |
| Cow position: | chr6:55238321-55238640 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 196 |
| Conread position: | 8-336 |
| Cow position: | chr6:328733-328415 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 8-336 |
| Cow position: | chr6:51149568-51149887 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 9-328 |
| Cow position: | chr6:12514145-12514454 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 140, 149 |
| Conread position: | 9-335 |
| Cow position: | chr6:478178-478494 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 9-335 |
| Cow position: | chr6:15138539-15138222 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 12-335 |
| Cow position: | chr6:12351459-12351772 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 24-335 |
| Cow position: | chr6:64425137-64425440 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 172 |
| Conread position: | 29-335 |
| Cow position: | chr6:4467253-4467555 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 174 |
| Conread position: | 35-328 |
| Cow position: | chr6:9734309-9734026 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 63 |
| Conread position: | 35-335 |
| Cow position: | chr6:66277088-66277384 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 50-328 |
| Cow position: | chr6:11354495-11354226 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 50-335 |
| Cow position: | chr6:38274243-38274536 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 60-335 |
| Cow position: | chr6:40277737-40278003 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 61-316 |
| Cow position: | chr6:22667645-22667403 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 75-332 |
| Cow position: | chr6:1888742-1888496 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 81-335 |
| Cow position: | chr6:50486075-50485829 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 144 |
| Conread position: | 83-316 |
| Cow position: | chr6:47573483-47573708 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 119-335 |
| Cow position: | chr6:11289718-11289512 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 138-335 |
| Cow position: | chr6:25217713-25217898 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 145-332 |
| Cow position: | chr6:52249737-52249561 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.