Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-320 |
| Cow position: | chr7:21314601-21314910 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 1-331 |
| Cow position: | chr7:35276742-35276424 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 180 |
| Conread position: | 1-332 |
| Cow position: | chr7:8142262-8141940 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-332 |
| Cow position: | chr7:13531194-13530873 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-332 |
| Cow position: | chr7:46748698-46749020 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-332 |
| Cow position: | chr7:58197462-58197140 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr7:16934017-16934339 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 1-335 |
| Cow position: | chr7:26889103-26888777 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 224 |
| Conread position: | 1-335 |
| Cow position: | chr7:27099559-27099234 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr7:34488627-34488942 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-335 |
| Cow position: | chr7:38399563-38399887 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-331 |
| Cow position: | chr7:27346748-27346427 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 2-331 |
| Cow position: | chr7:63948403-63948078 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-332 |
| Cow position: | chr7:20535424-20535746 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 202 |
| Conread position: | 7-335 |
| Cow position: | chr7:61138438-61138125 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 8-294 |
| Cow position: | chr7:59559663-59559390 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 8-324 |
| Cow position: | chr7:65625155-65624846 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 217 |
| Conread position: | 8-331 |
| Cow position: | chr7:63388716-63389027 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-332 |
| Cow position: | chr7:8742570-8742244 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 249 |
| Conread position: | 8-332 |
| Cow position: | chr7:59686706-59687034 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 15 |
| Conread position: | 8-335 |
| Cow position: | chr7:195186-194868 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr7:1214360-1214671 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 160, 41 |
| Conread position: | 8-335 |
| Cow position: | chr7:3158016-3158329 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 83 |
| Conread position: | 8-335 |
| Cow position: | chr7:14136132-14135814 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr7:29473162-29473480 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 8-335 |
| Cow position: | chr7:29744830-29744513 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 8-335 |
| Cow position: | chr7:33069784-33069468 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 161, 186 |
| Conread position: | 8-335 |
| Cow position: | chr7:44746141-44745821 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 218 |
| Conread position: | 8-335 |
| Cow position: | chr7:45170257-45170571 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 45 |
| Conread position: | 8-335 |
| Cow position: | chr7:50021983-50021662 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 141, 173 |
| Conread position: | 8-335 |
| Cow position: | chr7:60758476-60758158 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr7:64357904-64358222 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr7:65557701-65557382 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 217 |
| Conread position: | 9-332 |
| Cow position: | chr7:42872837-42873177 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 9-335 |
| Cow position: | chr7:42428317-42428636 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 217 |
| Conread position: | 9-335 |
| Cow position: | chr7:45946136-45945819 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 9-335 |
| Cow position: | chr7:54582171-54582493 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 173 |
| Conread position: | 10-336 |
| Cow position: | chr7:21232295-21231972 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 11 |
| Conread position: | 11-324 |
| Cow position: | chr7:59140949-59141243 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 11-332 |
| Cow position: | chr7:955363-955686 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 157, 223 |
| Conread position: | 11-332 |
| Cow position: | chr7:21241036-21240724 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 11-332 |
| Cow position: | chr7:52384487-52384178 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 20-330 |
| Cow position: | chr7:51193439-51193739 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 29-328 |
| Cow position: | chr7:43240251-43239967 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 29-334 |
| Cow position: | chr7:54510460-54510175 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 29-335 |
| Cow position: | chr7:18425327-18425033 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 50, 155 |
| Conread position: | 29-336 |
| Cow position: | chr7:5260202-5259904 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 174 |
| Conread position: | 31-332 |
| Cow position: | chr7:1556144-1556435 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 31-332 |
| Cow position: | chr7:67431280-67431577 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 32-335 |
| Cow position: | chr7:49071248-49070938 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 134, 116 |
| Conread position: | 38-335 |
| Cow position: | chr7:537093-536799 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 157, 54 |
| Conread position: | 38-335 |
| Cow position: | chr7:67837710-67838000 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 55-335 |
| Cow position: | chr7:39794630-39794900 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 65-335 |
| Cow position: | chr7:55041281-55041549 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 132, 148 |
| Conread position: | 77-335 |
| Cow position: | chr7:58717913-58718163 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 85-335 |
| Cow position: | chr7:62393274-62393521 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 90-335 |
| Cow position: | chr7:23463599-23463367 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 91-316 |
| Cow position: | chr7:26770040-26770256 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 122-312 |
| Cow position: | chr7:6800270-6800081 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.