Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-305 |
| Cow position: | chr8:41642327-41642028 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 87, 215 |
| Conread position: | 1-326 |
| Cow position: | chr8:25773742-25773426 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 0 |
| Conread position: | 1-332 |
| Cow position: | chr8:60066774-60067097 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 224 |
| Conread position: | 1-335 |
| Cow position: | chr8:3854139-3853810 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 223 |
| Conread position: | 1-335 |
| Cow position: | chr8:12311989-12311664 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 189 |
| Conread position: | 1-335 |
| Cow position: | chr8:14588978-14588652 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 218 |
| Conread position: | 1-335 |
| Cow position: | chr8:33591255-33591579 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 2-334 |
| Cow position: | chr8:55302802-55303121 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 36 |
| Conread position: | 2-335 |
| Cow position: | chr8:29919095-29918751 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 2-335 |
| Cow position: | chr8:50284321-50283998 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 2-336 |
| Cow position: | chr8:12780336-12780018 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 173 |
| Conread position: | 8-321 |
| Cow position: | chr8:34485209-34484905 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 158, 32 |
| Conread position: | 8-328 |
| Cow position: | chr8:27154227-27153919 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 8-329 |
| Cow position: | chr8:16025359-16025042 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 8-330 |
| Cow position: | chr8:45688937-45688621 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 8-335 |
| Cow position: | chr8:1151380-1151070 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 194, 109 |
| Conread position: | 8-335 |
| Cow position: | chr8:1582394-1582711 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:8515180-8514857 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:8523721-8524039 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 218 |
| Conread position: | 8-335 |
| Cow position: | chr8:9263763-9263446 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 141, 122 |
| Conread position: | 8-335 |
| Cow position: | chr8:17201122-17200791 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 8-335 |
| Cow position: | chr8:18403423-18403105 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:38393537-38393854 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 8-335 |
| Cow position: | chr8:42486811-42487129 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:44702248-44702564 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:50431239-50430921 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 8-335 |
| Cow position: | chr8:55271626-55271308 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 9-311 |
| Cow position: | chr8:51207450-51207157 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 130 |
| Conread position: | 9-330 |
| Cow position: | chr8:41970157-41969842 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 138, 148 |
| Conread position: | 9-335 |
| Cow position: | chr8:50928200-50927884 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 9-336 |
| Cow position: | chr8:45792814-45792499 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 10-335 |
| Cow position: | chr8:6748856-6748541 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 10-335 |
| Cow position: | chr8:34399456-34399765 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 11-335 |
| Cow position: | chr8:45142517-45142203 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 11-335 |
| Cow position: | chr8:47659425-47659111 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 20-335 |
| Cow position: | chr8:5680263-5679962 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 24-328 |
| Cow position: | chr8:47888771-47889065 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 27-335 |
| Cow position: | chr8:44123972-44124273 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 199 |
| Conread position: | 29-330 |
| Cow position: | chr8:45154398-45154104 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 176, 152 |
| Conread position: | 29-335 |
| Cow position: | chr8:9994387-9994681 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 170, 52 |
| Conread position: | 29-335 |
| Cow position: | chr8:53434139-53434437 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 30-330 |
| Cow position: | chr8:58855607-58855897 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 31-330 |
| Cow position: | chr8:12540127-12539840 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 31-330 |
| Cow position: | chr8:40550367-40550069 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 125, 82 |
| Conread position: | 31-332 |
| Cow position: | chr8:12056481-12056772 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 31-332 |
| Cow position: | chr8:47675764-47676046 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-330 |
| Cow position: | chr8:32649631-32649903 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 64-336 |
| Cow position: | chr8:11373698-11373437 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 87-330 |
| Cow position: | chr8:35212620-35212386 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 90-332 |
| Cow position: | chr8:51062159-51061926 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 91-328 |
| Cow position: | chr8:46960993-46961220 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 107-335 |
| Cow position: | chr8:12150306-12150525 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 119-335 |
| Cow position: | chr8:38574654-38574442 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 122-335 |
| Cow position: | chr8:59657547-59657753 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 123-332 |
| Cow position: | chr8:24903871-24904073 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 149-332 |
| Cow position: | chr8:11780970-11781153 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 160-330 |
| Cow position: | chr8:18208884-18208726 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 193-332 |
| Cow position: | chr8:34406522-34406658 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 28 |
Show alignments to all cow chromosomes.