Cow genome map
| Conread name: | Ova1-OVR010008E02 |
| Conread position: | 1-332 |
| Cow position: | chr9:20175173-20174850 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 142 |
| Conread position: | 1-332 |
| Cow position: | chr9:26088445-26088130 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-335 |
| Cow position: | chr9:18539212-18539536 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 224 |
| Conread position: | 1-335 |
| Cow position: | chr9:26054596-26054919 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-335 |
| Cow position: | chr9:28658501-28658176 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 1-335 |
| Cow position: | chr9:32971924-32972240 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 2-329 |
| Cow position: | chr9:37067396-37067714 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-330 |
| Cow position: | chr9:25976082-25976398 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 33 |
| Conread position: | 2-331 |
| Cow position: | chr9:61740490-61740166 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 4-335 |
| Cow position: | chr9:4306518-4306196 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 7-331 |
| Cow position: | chr9:29337319-29337631 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 8-304 |
| Cow position: | chr9:5534377-5534090 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 8-330 |
| Cow position: | chr9:2595222-2595533 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 142 |
| Conread position: | 8-330 |
| Cow position: | chr9:34946468-34946154 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 8-331 |
| Cow position: | chr9:17301575-17301261 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 8-335 |
| Cow position: | chr9:2526844-2527161 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 8-335 |
| Cow position: | chr9:20941012-20941347 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 100 |
| Conread position: | 8-335 |
| Cow position: | chr9:30674626-30674948 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 220 |
| Conread position: | 8-335 |
| Cow position: | chr9:31810134-31810451 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 8-335 |
| Cow position: | chr9:38678684-38679001 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 8-335 |
| Cow position: | chr9:47005298-47005614 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 8-335 |
| Cow position: | chr9:47044503-47044820 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 8-335 |
| Cow position: | chr9:47170601-47170921 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 217 |
| Conread position: | 8-336 |
| Cow position: | chr9:31113709-31114037 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 222 |
| Conread position: | 9-335 |
| Cow position: | chr9:2873030-2873347 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 9-335 |
| Cow position: | chr9:4940943-4940625 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 211 |
| Conread position: | 9-335 |
| Cow position: | chr9:18507270-18506951 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 217 |
| Conread position: | 9-335 |
| Cow position: | chr9:53530279-53530593 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 10-335 |
| Cow position: | chr9:7459300-7458995 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 10-335 |
| Cow position: | chr9:49117308-49117618 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 19 |
| Conread position: | 17-335 |
| Cow position: | chr9:35593528-35593216 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 26 |
| Conread position: | 29-335 |
| Cow position: | chr9:2864978-2864688 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 35-335 |
| Cow position: | chr9:49283424-49283717 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 58-335 |
| Cow position: | chr9:36845317-36845054 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 59-335 |
| Cow position: | chr9:791713-791442 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 169 |
| Conread position: | 68-335 |
| Cow position: | chr9:1998680-1998422 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 87-335 |
| Cow position: | chr9:1850981-1850741 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 94-335 |
| Cow position: | chr9:23044103-23044345 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 124-336 |
| Cow position: | chr9:13180577-13180796 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 192-329 |
| Cow position: | chr9:20577610-20577742 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.