Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-122 |
| Cow position: | chr1:99543157-99543284 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-126 |
| Cow position: | chr1:94404104-94403977 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-135 |
| Cow position: | chr1:47233587-47233723 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-137 |
| Cow position: | chr1:72141452-72141314 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-137 |
| Cow position: | chr1:74084305-74084439 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 1-140 |
| Cow position: | chr1:14379643-14379783 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 1-148 |
| Cow position: | chr1:84116289-84116141 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 1-171 |
| Cow position: | chr1:24225611-24225777 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 1-206 |
| Cow position: | chr1:49839399-49839204 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 1-227 |
| Cow position: | chr1:95215290-95215515 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 151 |
| Conread position: | 1-229 |
| Cow position: | chr1:98563055-98562819 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 1-245 |
| Cow position: | chr1:91066261-91066505 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 190 |
| Conread position: | 1-271 |
| Cow position: | chr1:102647381-102647652 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 187 |
| Conread position: | 1-330 |
| Cow position: | chr1:52039528-52039195 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 1-337 |
| Cow position: | chr1:90868548-90868876 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 1-407 |
| Cow position: | chr1:75967323-75966894 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 1-408 |
| Cow position: | chr1:39069063-39069492 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 194 |
| Conread position: | 1-408 |
| Cow position: | chr1:52563904-52564300 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 1-408 |
| Cow position: | chr1:54199492-54199900 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 1-408 |
| Cow position: | chr1:77620443-77620025 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 196 |
| Conread position: | 1-408 |
| Cow position: | chr1:96964211-96963807 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 191 |
| Conread position: | 1-409 |
| Cow position: | chr1:76222799-76223212 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 191 |
| Conread position: | 1-410 |
| Cow position: | chr1:53613306-53613728 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 190 |
| Conread position: | 1-410 |
| Cow position: | chr1:82936694-82937106 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 398 |
| Conread position: | 1-419 |
| Cow position: | chr1:23634013-23634428 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 2-135 |
| Cow position: | chr1:3923904-3924042 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 2-148 |
| Cow position: | chr1:39702715-39702573 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 2-412 |
| Cow position: | chr1:68855061-68854666 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 7-376 |
| Cow position: | chr1:57541616-57541980 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 10-228 |
| Cow position: | chr1:80988228-80988011 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 12-148 |
| Cow position: | chr1:45535585-45535441 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 12-150 |
| Cow position: | chr1:52488083-52488221 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 12-206 |
| Cow position: | chr1:34000789-34000578 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 12-327 |
| Cow position: | chr1:54258443-54258133 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 13-412 |
| Cow position: | chr1:8659530-8659122 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 181 |
| Conread position: | 14-408 |
| Cow position: | chr1:72813289-72812895 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 173 |
| Conread position: | 131-410 |
| Cow position: | chr1:66835283-66835555 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 249, 36 |
Show alignments to all cow chromosomes.