Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-105 |
| Cow position: | chr11:82940754-82940860 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-120 |
| Cow position: | chr11:31227857-31227736 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-133 |
| Cow position: | chr11:75748301-75748164 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-136 |
| Cow position: | chr11:79728802-79728948 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-137 |
| Cow position: | chr11:48474570-48474433 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 1-151 |
| Cow position: | chr11:8988360-8988519 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-173 |
| Cow position: | chr11:60302092-60302269 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:9837234-9837437 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-206 |
| Cow position: | chr11:70619921-70619711 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 12, 82 |
| Conread position: | 1-213 |
| Cow position: | chr11:22977997-22978214 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 1-216 |
| Cow position: | chr11:39034317-39034108 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 144 |
| Conread position: | 1-226 |
| Cow position: | chr11:35874125-35874337 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 216, 49 |
| Conread position: | 1-297 |
| Cow position: | chr11:26483581-26483302 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 171 |
| Conread position: | 1-406 |
| Cow position: | chr11:44234220-44233831 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 1-412 |
| Cow position: | chr11:50152949-50153365 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 1-412 |
| Cow position: | chr11:77758891-77759300 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 10-254 |
| Cow position: | chr11:25807898-25808147 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 12-134 |
| Cow position: | chr11:17192427-17192554 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-138 |
| Cow position: | chr11:63518865-63518738 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 12-148 |
| Cow position: | chr11:18484309-18484446 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 12-148 |
| Cow position: | chr11:57111454-57111594 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 12-153 |
| Cow position: | chr11:32254465-32254607 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 12-203 |
| Cow position: | chr11:46451467-46451278 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 12-282 |
| Cow position: | chr11:85678440-85678163 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 12-351 |
| Cow position: | chr11:37118343-37117986 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 12-356 |
| Cow position: | chr11:7924731-7925085 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 145 |
| Conread position: | 12-412 |
| Cow position: | chr11:26535634-26535219 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 192 |
| Conread position: | 13-407 |
| Cow position: | chr11:17112777-17113171 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 174 |
Show alignments to all cow chromosomes.