Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-135 |
| Cow position: | chr13:9246818-9246954 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-135 |
| Cow position: | chr13:55406560-55406425 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 1-137 |
| Cow position: | chr13:5279085-5278946 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-138 |
| Cow position: | chr13:54093845-54093985 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 1-140 |
| Cow position: | chr13:15974714-15974855 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-142 |
| Cow position: | chr13:37069450-37069596 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-148 |
| Cow position: | chr13:1779933-1780088 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-263 |
| Cow position: | chr13:13320884-13321143 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 1-306 |
| Cow position: | chr13:8609450-8609151 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 130 |
| Conread position: | 1-357 |
| Cow position: | chr13:25926892-25927272 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 340 |
| Conread position: | 1-397 |
| Cow position: | chr13:43762269-43762665 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 195 |
| Conread position: | 1-409 |
| Cow position: | chr13:32167204-32166793 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 107 |
| Conread position: | 1-410 |
| Cow position: | chr13:2414130-2414538 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 152 |
| Conread position: | 1-410 |
| Cow position: | chr13:31813971-31814373 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 1-412 |
| Cow position: | chr13:21989006-21988591 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 164 |
| Conread position: | 1-412 |
| Cow position: | chr13:32961533-32961127 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 1-412 |
| Cow position: | chr13:37484174-37483745 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 195 |
| Conread position: | 1-412 |
| Cow position: | chr13:60429974-60429573 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 186 |
| Conread position: | 1-419 |
| Cow position: | chr13:19178376-19178806 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 154 |
| Conread position: | 1-423 |
| Cow position: | chr13:21275955-21276383 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 186 |
| Conread position: | 2-190 |
| Cow position: | chr13:37497651-37497461 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 2-226 |
| Cow position: | chr13:6498693-6498923 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 12-127 |
| Cow position: | chr13:14220585-14220702 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 12-130 |
| Cow position: | chr13:51108607-51108724 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 12-139 |
| Cow position: | chr13:20041850-20041713 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 12-148 |
| Cow position: | chr13:26261686-26261541 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-154 |
| Cow position: | chr13:4866863-4866721 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 12-173 |
| Cow position: | chr13:18852192-18852350 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 12-235 |
| Cow position: | chr13:13265919-13266140 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 12-330 |
| Cow position: | chr13:20879719-20879402 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 12-412 |
| Cow position: | chr13:20174862-20175256 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 13-269 |
| Cow position: | chr13:20820723-20820465 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 176 |
| Conread position: | 14-361 |
| Cow position: | chr13:25531674-25531324 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 15-410 |
| Cow position: | chr13:36397047-36396644 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
Show alignments to all cow chromosomes.