Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-106 |
| Cow position: | chr16:12361091-12361197 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 1-135 |
| Cow position: | chr16:19408631-19408768 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 1-145 |
| Cow position: | chr16:17745719-17745569 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-147 |
| Cow position: | chr16:14242257-14242108 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-147 |
| Cow position: | chr16:53086445-53086591 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-149 |
| Cow position: | chr16:11619634-11619485 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1-184 |
| Cow position: | chr16:53627542-53627724 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 156 |
| Conread position: | 1-187 |
| Cow position: | chr16:37380151-37379963 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 162 |
| Conread position: | 1-222 |
| Cow position: | chr16:13791401-13791164 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 43, 202 |
| Conread position: | 1-224 |
| Cow position: | chr16:4626506-4626737 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 192 |
| Conread position: | 1-274 |
| Cow position: | chr16:4763017-4762737 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 1-338 |
| Cow position: | chr16:39165129-39164806 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 139 |
| Conread position: | 1-389 |
| Cow position: | chr16:23738064-23737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 187 |
| Conread position: | 1-393 |
| Cow position: | chr16:52855139-52855523 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 1-408 |
| Cow position: | chr16:15255070-15255477 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 156 |
| Conread position: | 1-408 |
| Cow position: | chr16:16096621-16096212 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 1-412 |
| Cow position: | chr16:23472632-23472220 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 195 |
| Conread position: | 2-262 |
| Cow position: | chr16:14754438-14754704 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 185 |
| Conread position: | 12-116 |
| Cow position: | chr16:10945767-10945869 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 12-135 |
| Cow position: | chr16:11615359-11615483 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 12-264 |
| Cow position: | chr16:32132398-32132151 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 12-280 |
| Cow position: | chr16:25965370-25965110 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 12-330 |
| Cow position: | chr16:49125655-49125968 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 12-405 |
| Cow position: | chr16:32327525-32327135 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 12-412 |
| Cow position: | chr16:41590648-41590255 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 108 |
| Conread position: | 13-244 |
| Cow position: | chr16:44744266-44744512 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 13-409 |
| Cow position: | chr16:55308661-55309075 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 185 |
| Conread position: | 15-409 |
| Cow position: | chr16:50453491-50453104 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 63 |
Show alignments to all cow chromosomes.