Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-136 |
| Cow position: | chr3:42483762-42483621 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-137 |
| Cow position: | chr3:17957324-17957187 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 1-137 |
| Cow position: | chr3:22171048-22170909 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-145 |
| Cow position: | chr3:23876856-23876710 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-145 |
| Cow position: | chr3:56704682-56704825 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 1-148 |
| Cow position: | chr3:19006525-19006376 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-149 |
| Cow position: | chr3:59392244-59392399 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 1-157 |
| Cow position: | chr3:30463304-30463466 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-159 |
| Cow position: | chr3:19198543-19198376 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-173 |
| Cow position: | chr3:53113035-53112852 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-210 |
| Cow position: | chr3:61361265-61361065 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 1-239 |
| Cow position: | chr3:18066997-18066753 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 192 |
| Conread position: | 1-257 |
| Cow position: | chr3:20437788-20438059 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 207 |
| Conread position: | 1-306 |
| Cow position: | chr3:12670832-12671143 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 190 |
| Conread position: | 1-318 |
| Cow position: | chr3:66375178-66374869 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 1-397 |
| Cow position: | chr3:7678529-7678123 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 1-408 |
| Cow position: | chr3:1830707-1831122 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 1-408 |
| Cow position: | chr3:2008126-2007720 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 117 |
| Conread position: | 1-410 |
| Cow position: | chr3:48530499-48530088 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 2-119 |
| Cow position: | chr3:28692573-28692691 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-410 |
| Cow position: | chr3:14552735-14552328 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 177 |
| Conread position: | 7-216 |
| Cow position: | chr3:65058557-65058348 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 9-149 |
| Cow position: | chr3:62789347-62789496 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 11-210 |
| Cow position: | chr3:41053664-41053464 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 12-131 |
| Cow position: | chr3:84368524-84368643 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-137 |
| Cow position: | chr3:56525-56649 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 12-149 |
| Cow position: | chr3:70467958-70468095 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 12-160 |
| Cow position: | chr3:18763743-18763591 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 12-160 |
| Cow position: | chr3:70401752-70401600 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-206 |
| Cow position: | chr3:31903264-31903456 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 12-364 |
| Cow position: | chr3:69895204-69895561 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 12-391 |
| Cow position: | chr3:18393538-18393922 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 122 |
| Conread position: | 13-126 |
| Cow position: | chr3:525199-525085 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 13-126 |
| Cow position: | chr3:84000461-84000343 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 13-403 |
| Cow position: | chr3:26553867-26554274 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 176 |
| Conread position: | 13-408 |
| Cow position: | chr3:80740417-80740031 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 93 |
| Conread position: | 14-136 |
| Cow position: | chr3:57624311-57624184 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 14-266 |
| Cow position: | chr3:16004142-16004392 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 147-410 |
| Cow position: | chr3:48600396-48600152 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 236, 42 |
Show alignments to all cow chromosomes.