Cow genome map
| Conread name: | Ova1-OVR010021F12 |
| Conread position: | 1-112 |
| Cow position: | chr5:8994655-8994771 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-116 |
| Cow position: | chr5:57737021-57736905 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-131 |
| Cow position: | chr5:5257382-5257522 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-140 |
| Cow position: | chr5:20779475-20779614 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 1-142 |
| Cow position: | chr5:9859802-9859954 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:63987540-63987714 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-210 |
| Cow position: | chr5:6503969-6504169 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 1-238 |
| Cow position: | chr5:43858521-43858759 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 1-262 |
| Cow position: | chr5:53842195-53841929 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 1-270 |
| Cow position: | chr5:41129672-41129391 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 12, 195 |
| Conread position: | 1-351 |
| Cow position: | chr5:26790545-26790888 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 1-412 |
| Cow position: | chr5:28224363-28223957 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 12-135 |
| Cow position: | chr5:28926285-28926414 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 12-145 |
| Cow position: | chr5:32087818-32087960 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-148 |
| Cow position: | chr5:1247175-1247033 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-401 |
| Cow position: | chr5:28651142-28650763 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 12-408 |
| Cow position: | chr5:29827948-29827551 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 175 |
| Conread position: | 12-410 |
| Cow position: | chr5:64844223-64844619 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 12-412 |
| Cow position: | chr5:24349006-24348617 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 144 |
| Conread position: | 13-133 |
| Cow position: | chr5:51490861-51490981 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 73 |
| Conread position: | 13-412 |
| Cow position: | chr5:41522898-41523292 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 91 |
| Conread position: | 14-207 |
| Cow position: | chr5:72150144-72149951 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 103, 147 |
| Conread position: | 14-226 |
| Cow position: | chr5:15462606-15462406 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 14-412 |
| Cow position: | chr5:4631020-4630610 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 129 |
| Conread position: | 15-137 |
| Cow position: | chr5:42744684-42744566 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.