Cow genome map
| Conread name: | Ova1-OVR010028G07 |
| Conread position: | 39-535 |
| Cow position: | chr11:15982938-15982445 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 196, 13 |
| Conread position: | 153-384 |
| Cow position: | chr11:9220795-9221032 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 191-373 |
| Cow position: | chr11:8262517-8262701 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 201-429 |
| Cow position: | chr11:21466282-21466048 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 201-429 |
| Cow position: | chr11:34020094-34019862 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 201-431 |
| Cow position: | chr11:30304456-30304223 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 201-432 |
| Cow position: | chr11:15998088-15997850 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 201-473 |
| Cow position: | chr11:52462247-52461981 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 201-508 |
| Cow position: | chr11:4041917-4042237 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 201-517 |
| Cow position: | chr11:17108523-17108849 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-535 |
| Cow position: | chr11:67847423-67847767 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-536 |
| Cow position: | chr11:24677237-24676893 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 201-536 |
| Cow position: | chr11:33195748-33196090 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 201-549 |
| Cow position: | chr11:32450011-32449654 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-561 |
| Cow position: | chr11:3492157-3491784 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 201-561 |
| Cow position: | chr11:20921604-20921977 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 201-561 |
| Cow position: | chr11:28230600-28230971 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 201-561 |
| Cow position: | chr11:37477973-37478346 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 201-561 |
| Cow position: | chr11:39799131-39799505 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-561 |
| Cow position: | chr11:57628899-57629270 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 201-561 |
| Cow position: | chr11:63661402-63661770 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 148, 84 |
| Conread position: | 202-481 |
| Cow position: | chr11:7112622-7112335 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 202-517 |
| Cow position: | chr11:54208792-54208469 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 202-536 |
| Cow position: | chr11:76375292-76375641 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 202-561 |
| Cow position: | chr11:40779472-40779841 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 203-549 |
| Cow position: | chr11:31925324-31924962 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 42, 189 |
| Conread position: | 206-432 |
| Cow position: | chr11:9660208-9660436 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 206-536 |
| Cow position: | chr11:52530175-52529841 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 206-539 |
| Cow position: | chr11:19065118-19065463 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 206-561 |
| Cow position: | chr11:36745040-36745409 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 235-377 |
| Cow position: | chr11:28062807-28062665 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 48 |
| Conread position: | 326-536 |
| Cow position: | chr11:7686346-7686138 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 537-801 |
| Cow position: | chr11:24676963-24676696 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 658-805 |
| Cow position: | chr11:77778372-77778520 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.