Cow genome map
| Conread name: | Ova1-OVR010028G07 |
| Conread position: | 141-516 |
| Cow position: | chr2:51305813-51306182 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 184-548 |
| Cow position: | chr2:14560187-14559811 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 201-378 |
| Cow position: | chr2:75250790-75250616 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 201-385 |
| Cow position: | chr2:46945554-46945361 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 201-405 |
| Cow position: | chr2:32654346-32654128 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 201-429 |
| Cow position: | chr2:5481620-5481852 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 201-429 |
| Cow position: | chr2:40244875-40244638 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 201-432 |
| Cow position: | chr2:6879176-6878938 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 201-488 |
| Cow position: | chr2:9906903-9906604 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 201-516 |
| Cow position: | chr2:22076792-22076467 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-516 |
| Cow position: | chr2:51991560-51991883 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-522 |
| Cow position: | chr2:44992283-44992595 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 201-535 |
| Cow position: | chr2:2413820-2414164 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-535 |
| Cow position: | chr2:44090276-44089932 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-535 |
| Cow position: | chr2:52615441-52615093 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-536 |
| Cow position: | chr2:2185252-2185598 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-536 |
| Cow position: | chr2:2380098-2379755 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 201-536 |
| Cow position: | chr2:47039434-47039779 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-536 |
| Cow position: | chr2:57334176-57333832 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 201-536 |
| Cow position: | chr2:67421863-67422205 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 201-548 |
| Cow position: | chr2:40963152-40963510 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-561 |
| Cow position: | chr2:26865569-26865942 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-561 |
| Cow position: | chr2:49470819-49470445 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 202-455 |
| Cow position: | chr2:5485939-5486207 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 202-512 |
| Cow position: | chr2:6959744-6959427 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 202-512 |
| Cow position: | chr2:41149062-41148755 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 202-535 |
| Cow position: | chr2:16288250-16287914 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 202-536 |
| Cow position: | chr2:6877503-6877169 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 202-548 |
| Cow position: | chr2:7901061-7900701 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 202-548 |
| Cow position: | chr2:44936075-44936435 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 124 |
| Conread position: | 203-535 |
| Cow position: | chr2:25031495-25031834 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 205-487 |
| Cow position: | chr2:1673649-1673932 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 206-370 |
| Cow position: | chr2:28622081-28622245 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 78 |
| Conread position: | 206-536 |
| Cow position: | chr2:54736596-54736256 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 206-561 |
| Cow position: | chr2:27816738-27816368 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 208-429 |
| Cow position: | chr2:422018-421790 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 221-432 |
| Cow position: | chr2:5898232-5898017 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 232-443 |
| Cow position: | chr2:36054244-36054463 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 256-548 |
| Cow position: | chr2:15579019-15579320 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 339-562 |
| Cow position: | chr2:52629082-52629302 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 344-536 |
| Cow position: | chr2:9906606-9906416 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 346-536 |
| Cow position: | chr2:32435443-32435624 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 537-721 |
| Cow position: | chr2:7900785-7900598 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 545-730 |
| Cow position: | chr2:5486196-5486385 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 9 |
Show alignments to all cow chromosomes.