Cow genome map
| Conread name: | Ova1-OVR010028G07 |
| Conread position: | 101-409 |
| Cow position: | chr5:7273253-7272944 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 48 |
| Conread position: | 196-429 |
| Cow position: | chr5:52804653-52804420 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 201-423 |
| Cow position: | chr5:12682212-12682446 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 88 |
| Conread position: | 201-429 |
| Cow position: | chr5:32733929-32734163 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 201-429 |
| Cow position: | chr5:45699321-45699090 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 201-432 |
| Cow position: | chr5:27652661-27652893 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 201-433 |
| Cow position: | chr5:54793327-54793566 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 201-453 |
| Cow position: | chr5:32945174-32944914 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 201-470 |
| Cow position: | chr5:23716661-23716931 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 201-535 |
| Cow position: | chr5:10776986-10777329 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-535 |
| Cow position: | chr5:46775350-46775007 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-536 |
| Cow position: | chr5:10443944-10444285 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 201-539 |
| Cow position: | chr5:31705835-31705482 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 201-561 |
| Cow position: | chr5:3963730-3963360 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 201-561 |
| Cow position: | chr5:27910010-27910382 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 201-561 |
| Cow position: | chr5:35299039-35298668 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 201-561 |
| Cow position: | chr5:41963639-41964008 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 89 |
| Conread position: | 202-517 |
| Cow position: | chr5:4384516-4384191 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 202-519 |
| Cow position: | chr5:32674451-32674776 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 202-561 |
| Cow position: | chr5:61273879-61274252 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 203-420 |
| Cow position: | chr5:46658990-46658775 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 206-548 |
| Cow position: | chr5:14379421-14379068 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 206-561 |
| Cow position: | chr5:48469019-48469388 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 206-561 |
| Cow position: | chr5:54936256-54936625 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 207-561 |
| Cow position: | chr5:18663499-18663130 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 207-561 |
| Cow position: | chr5:53714508-53714140 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 209-475 |
| Cow position: | chr5:49594192-49594465 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 233-429 |
| Cow position: | chr5:49181561-49181366 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 241-518 |
| Cow position: | chr5:12644880-12645155 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 109, 40 |
| Conread position: | 242-535 |
| Cow position: | chr5:32771689-32771391 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 245-548 |
| Cow position: | chr5:41530332-41530632 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 40 |
| Conread position: | 350-543 |
| Cow position: | chr5:27061495-27061689 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 78 |
| Conread position: | 353-534 |
| Cow position: | chr5:46631423-46631597 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 536-802 |
| Cow position: | chr5:61274153-61274422 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 571-802 |
| Cow position: | chr5:23688562-23688794 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 587-804 |
| Cow position: | chr5:46658158-46657932 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.