Cow genome map
| Conread name: | Ova1-OVRM10005D01 |
| Conread position: | 1-225 |
| Cow position: | chr1:72136917-72137136 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 1-238 |
| Cow position: | chr1:89479582-89479826 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 2-228 |
| Cow position: | chr1:86609690-86609917 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 2-231 |
| Cow position: | chr1:5319021-5319250 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 2-240 |
| Cow position: | chr1:31418681-31418442 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 2-243 |
| Cow position: | chr1:30027273-30027030 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 202 |
| Conread position: | 3-190 |
| Cow position: | chr1:13880399-13880586 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 8-162 |
| Cow position: | chr1:88295328-88295489 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 10-241 |
| Cow position: | chr1:58179858-58179625 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 29-243 |
| Cow position: | chr1:29414302-29414087 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 60-170 |
| Cow position: | chr1:67901579-67901468 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 62-233 |
| Cow position: | chr1:23051389-23051561 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 97-218 |
| Cow position: | chr1:34689741-34689862 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 354-682 |
| Cow position: | chr1:29414103-29413747 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 5 |
| Conread position: | 504-715 |
| Cow position: | chr1:38387136-38386917 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 508-715 |
| Cow position: | chr1:67287047-67287262 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 511-693 |
| Cow position: | chr1:98659664-98659483 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 30 |
Show alignments to all cow chromosomes.