Cow genome map
| Conread name: | Ova1-OVRM10005D01 |
| Conread position: | 1-131 |
| Cow position: | chr3:52864313-52864179 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 1-131 |
| Cow position: | chr3:64358013-64357878 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-240 |
| Cow position: | chr3:3980541-3980784 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 2-217 |
| Cow position: | chr3:34093292-34093072 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 2-240 |
| Cow position: | chr3:4027429-4027668 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 134 |
| Conread position: | 2-241 |
| Cow position: | chr3:14754140-14753899 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 2-242 |
| Cow position: | chr3:32842292-32842064 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 2-244 |
| Cow position: | chr3:56097677-56097917 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 2-248 |
| Cow position: | chr3:26949669-26949900 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 4-131 |
| Cow position: | chr3:19802808-19802939 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 8-231 |
| Cow position: | chr3:45774935-45774712 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 177 |
| Conread position: | 28-184 |
| Cow position: | chr3:63241557-63241404 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 31-242 |
| Cow position: | chr3:36098533-36098322 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 173 |
| Conread position: | 36-234 |
| Cow position: | chr3:36127571-36127765 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 61-241 |
| Cow position: | chr3:15178513-15178699 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 353-642 |
| Cow position: | chr3:54342425-54342123 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 199 |
| Conread position: | 378-713 |
| Cow position: | chr3:64357855-64357533 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 157, 85 |
| Conread position: | 506-713 |
| Cow position: | chr3:2907665-2907459 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 512-714 |
| Cow position: | chr3:58947728-58947937 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 540-716 |
| Cow position: | chr3:38492782-38492955 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 52 |
Show alignments to all cow chromosomes.