Cow genome map
| Conread name: | Ova1-OVRM10005H05 |
| Conread position: | 32-182 |
| Cow position: | chr1:15249104-15248955 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 32-366 |
| Cow position: | chr1:12971478-12971153 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 164, 36 |
| Conread position: | 33-389 |
| Cow position: | chr1:43226790-43227141 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 34-311 |
| Cow position: | chr1:67958799-67959067 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 34-318 |
| Cow position: | chr1:12969008-12968725 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 35-396 |
| Cow position: | chr1:95449240-95448881 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 286, 24 |
| Conread position: | 35-528 |
| Cow position: | chr1:10002550-10003039 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 38-345 |
| Cow position: | chr1:23907336-23907034 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 38-366 |
| Cow position: | chr1:82642148-82642466 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 230, 35 |
| Conread position: | 40-388 |
| Cow position: | chr1:83517671-83518017 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 56-392 |
| Cow position: | chr1:62234734-62234381 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 61-389 |
| Cow position: | chr1:31215698-31216041 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 61-392 |
| Cow position: | chr1:88966547-88966878 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 72-320 |
| Cow position: | chr1:41910170-41909916 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 72-392 |
| Cow position: | chr1:5346078-5345746 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 102, 63 |
| Conread position: | 73-319 |
| Cow position: | chr1:62329609-62329844 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 92-391 |
| Cow position: | chr1:54633818-54634113 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 100-392 |
| Cow position: | chr1:34613310-34613000 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 112-389 |
| Cow position: | chr1:34201850-34202122 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 214, 75 |
| Conread position: | 566-716 |
| Cow position: | chr1:10003048-10003196 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 99, 59 |
Show alignments to all cow chromosomes.