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Cow genome map

           
Conread name:
           
Ova1-OVRM10011B10
        

               
Conread position:
               
124-455
               

               
Cow position:
               
chr6:19259041-19259377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 144
               

               
Conread position:
               
130-601
               

               
Cow position:
               
chr6:8125628-8125158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
133-722
               

               
Cow position:
               
chr6:47520354-47519751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
146-692
               

               
Cow position:
               
chr6:61514912-61515467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
151-633
               

               
Cow position:
               
chr6:24222891-24223368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
155-536
               

               
Cow position:
               
chr6:22985586-22985972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
156-447
               

               
Cow position:
               
chr6:50504737-50504429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
6, 110
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr6:42035048-42034773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
158-794
               

               
Cow position:
               
chr6:6060297-6060929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
160-539
               

               
Cow position:
               
chr6:33207002-33206632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 218
               

               
Conread position:
               
161-796
               

               
Cow position:
               
chr6:61269585-61268959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
162-583
               

               
Cow position:
               
chr6:60740282-60739859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
162-614
               

               
Cow position:
               
chr6:50577784-50577332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
162-790
               

               
Cow position:
               
chr6:8562986-8562348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
162-794
               

               
Cow position:
               
chr6:5095269-5095922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
165-443
               

               
Cow position:
               
chr6:21293229-21293517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
165-794
               

               
Cow position:
               
chr6:13367549-13366927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
165-794
               

               
Cow position:
               
chr6:64432201-64431575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 289
               

               
Conread position:
               
167-407
               

               
Cow position:
               
chr6:43651984-43651767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
167-628
               

               
Cow position:
               
chr6:61137625-61137163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
167-794
               

               
Cow position:
               
chr6:48567097-48567717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
168-708
               

               
Cow position:
               
chr6:38218905-38218378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 30
               

               
Conread position:
               
169-442
               

               
Cow position:
               
chr6:13653610-13653331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
169-794
               

               
Cow position:
               
chr6:8804280-8804915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 26
               

               
Conread position:
               
171-348
               

               
Cow position:
               
chr6:28620362-28620185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
171-407
               

               
Cow position:
               
chr6:12623777-12623530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr6:30024134-30023899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
171-502
               

               
Cow position:
               
chr6:2624016-2623703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
171-545
               

               
Cow position:
               
chr6:38610237-38609846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
171-552
               

               
Cow position:
               
chr6:16287809-16288178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
171-562
               

               
Cow position:
               
chr6:21399492-21399892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
171-576
               

               
Cow position:
               
chr6:9219529-9219124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 199
               

               
Conread position:
               
171-650
               

               
Cow position:
               
chr6:48572638-48573110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
171-754
               

               
Cow position:
               
chr6:10176038-10176630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
171-784
               

               
Cow position:
               
chr6:31535311-31535920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 308
               

               
Conread position:
               
171-792
               

               
Cow position:
               
chr6:4864317-4864908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
171-793
               

               
Cow position:
               
chr6:52478151-52478813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
171-794
               

               
Cow position:
               
chr6:16700520-16699899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
171-794
               

               
Cow position:
               
chr6:24781290-24781941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
171-794
               

               
Cow position:
               
chr6:40032440-40031821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
172-695
               

               
Cow position:
               
chr6:54365073-54365596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
173-580
               

               
Cow position:
               
chr6:7128144-7128553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 322
               

               
Conread position:
               
173-794
               

               
Cow position:
               
chr6:43345179-43345826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 268
               

               
Conread position:
               
174-499
               

               
Cow position:
               
chr6:37395143-37395483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
174-501
               

               
Cow position:
               
chr6:67282142-67281819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr6:59719067-59718691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
174-794
               

               
Cow position:
               
chr6:9008362-9008972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
175-586
               

               
Cow position:
               
chr6:31846990-31847379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
175-598
               

               
Cow position:
               
chr6:27888600-27888176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
175-634
               

               
Cow position:
               
chr6:20157593-20157117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 460
               

               
Conread position:
               
176-434
               

               
Cow position:
               
chr6:47884789-47885033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
176-640
               

               
Cow position:
               
chr6:8966345-8965872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
176-794
               

               
Cow position:
               
chr6:18988447-18987848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 19
               

               
Conread position:
               
177-489
               

               
Cow position:
               
chr6:23353814-23353487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 210
               

               
Conread position:
               
177-646
               

               
Cow position:
               
chr6:55282037-55282514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
177-756
               

               
Cow position:
               
chr6:44078768-44078183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
177-793
               

               
Cow position:
               
chr6:60930662-60931274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
177-794
               

               
Cow position:
               
chr6:6067460-6068060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
177-794
               

               
Cow position:
               
chr6:32126308-32125695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 238
               

               
Conread position:
               
177-794
               

               
Cow position:
               
chr6:48806775-48807365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
178-771
               

               
Cow position:
               
chr6:15305826-15305240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
180-586
               

               
Cow position:
               
chr6:120487-120080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
181-497
               

               
Cow position:
               
chr6:17068404-17068723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
181-524
               

               
Cow position:
               
chr6:37463257-37462921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr6:43540011-43540182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
182-431
               

               
Cow position:
               
chr6:1475588-1475335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
182-794
               

               
Cow position:
               
chr6:45690367-45690981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
183-462
               

               
Cow position:
               
chr6:44623837-44623568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
183-513
               

               
Cow position:
               
chr6:60273761-60274098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
183-590
               

               
Cow position:
               
chr6:14913985-14914402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
183-600
               

               
Cow position:
               
chr6:65264302-65264708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
183-794
               

               
Cow position:
               
chr6:4469015-4468388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
183-794
               

               
Cow position:
               
chr6:8637518-8636904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
184-420
               

               
Cow position:
               
chr6:29775867-29775623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
184-575
               

               
Cow position:
               
chr6:46282742-46283146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 288
               

               
Conread position:
               
184-590
               

               
Cow position:
               
chr6:15243510-15243088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
184-794
               

               
Cow position:
               
chr6:13687567-13688189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
184-794
               

               
Cow position:
               
chr6:47026708-47026105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
185-415
               

               
Cow position:
               
chr6:60850947-60850708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 222
               

               
Conread position:
               
185-452
               

               
Cow position:
               
chr6:49437578-49437303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
185-468
               

               
Cow position:
               
chr6:2078570-2078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
185-491
               

               
Cow position:
               
chr6:31228991-31228700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
185-519
               

               
Cow position:
               
chr6:7119383-7119706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
185-525
               

               
Cow position:
               
chr6:1429881-1429537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
185-545
               

               
Cow position:
               
chr6:10225402-10225761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
185-545
               

               
Cow position:
               
chr6:23401747-23402111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
64, 166
               

               
Conread position:
               
185-549
               

               
Cow position:
               
chr6:37376295-37376643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
185-553
               

               
Cow position:
               
chr6:53841256-53841629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
185-563
               

               
Cow position:
               
chr6:60118390-60118010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
185-576
               

               
Cow position:
               
chr6:6965147-6965534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
185-597
               

               
Cow position:
               
chr6:15446944-15447378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
185-625
               

               
Cow position:
               
chr6:7189881-7190318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
185-627
               

               
Cow position:
               
chr6:21231760-21231335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
185-638
               

               
Cow position:
               
chr6:899074-899500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 10
               

               
Conread position:
               
185-647
               

               
Cow position:
               
chr6:50090892-50090415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
185-649
               

               
Cow position:
               
chr6:53460324-53460798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
185-734
               

               
Cow position:
               
chr6:12338238-12337673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
185-737
               

               
Cow position:
               
chr6:15937603-15938178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 233
               

               
Conread position:
               
185-777
               

               
Cow position:
               
chr6:44371693-44372293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
185-780
               

               
Cow position:
               
chr6:323055-323668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
185-783
               

               
Cow position:
               
chr6:28477396-28476817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
185-791
               

               
Cow position:
               
chr6:18080268-18080885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 253
               

               
Conread position:
               
185-793
               

               
Cow position:
               
chr6:35726337-35725715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
185-794
               

               
Cow position:
               
chr6:17557623-17557003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 239
               

               
Conread position:
               
185-794
               

               
Cow position:
               
chr6:37635017-37634419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
186-310
               

               
Cow position:
               
chr6:35993855-35993731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
186-468
               

               
Cow position:
               
chr6:55417285-55417572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 234
               

               
Conread position:
               
186-520
               

               
Cow position:
               
chr6:13565332-13564987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
186-626
               

               
Cow position:
               
chr6:15300594-15301017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
186-793
               

               
Cow position:
               
chr6:32122143-32121527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
186-794
               

               
Cow position:
               
chr6:28148509-28147884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
187-442
               

               
Cow position:
               
chr6:53546276-53546016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 239
               

               
Conread position:
               
187-469
               

               
Cow position:
               
chr6:3351275-3350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
187-543
               

               
Cow position:
               
chr6:25614844-25615222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
187-558
               

               
Cow position:
               
chr6:58370993-58370612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
187-628
               

               
Cow position:
               
chr6:51581008-51581460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
187-794
               

               
Cow position:
               
chr6:17414205-17414825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
187-794
               

               
Cow position:
               
chr6:46466063-46465456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
188-517
               

               
Cow position:
               
chr6:17548723-17549075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
188-596
               

               
Cow position:
               
chr6:11247015-11246595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 210
               

               
Conread position:
               
188-632
               

               
Cow position:
               
chr6:38441425-38440975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 189
               

               
Conread position:
               
188-698
               

               
Cow position:
               
chr6:24545840-24545353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
188-733
               

               
Cow position:
               
chr6:46558298-46557747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
189-461
               

               
Cow position:
               
chr6:66570669-66570399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
189-610
               

               
Cow position:
               
chr6:1704039-1703630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr6:36645615-36645283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
192-535
               

               
Cow position:
               
chr6:10039969-10039609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 238
               

               
Conread position:
               
192-570
               

               
Cow position:
               
chr6:19996856-19996477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 201
               

               
Conread position:
               
192-587
               

               
Cow position:
               
chr6:77696-78072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
310, 33
               

               
Conread position:
               
192-639
               

               
Cow position:
               
chr6:35415276-35415738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
192-763
               

               
Cow position:
               
chr6:63196940-63197508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
192-764
               

               
Cow position:
               
chr6:26728303-26728871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
192-794
               

               
Cow position:
               
chr6:47575132-47574557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 84
               

               
Conread position:
               
193-477
               

               
Cow position:
               
chr6:59438220-59438502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
193-649
               

               
Cow position:
               
chr6:54490506-54490967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
193-670
               

               
Cow position:
               
chr6:15243080-15242588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
194-420
               

               
Cow position:
               
chr6:58725606-58725372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 154
               

               
Conread position:
               
195-315
               

               
Cow position:
               
chr6:35628306-35628184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
195-316
               

               
Cow position:
               
chr6:29291812-29291687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr6:51933777-51933584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
195-398
               

               
Cow position:
               
chr6:16091135-16090927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 127
               

               
Conread position:
               
195-410
               

               
Cow position:
               
chr6:1941596-1941820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
195-423
               

               
Cow position:
               
chr6:5820022-5820248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
195-425
               

               
Cow position:
               
chr6:57320360-57320587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
195-446
               

               
Cow position:
               
chr6:26155383-26155128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
195-448
               

               
Cow position:
               
chr6:62056849-62056587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
195-449
               

               
Cow position:
               
chr6:63066075-63065798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
195-452
               

               
Cow position:
               
chr6:67451426-67451675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
195-466
               

               
Cow position:
               
chr6:67451134-67451415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
195-473
               

               
Cow position:
               
chr6:54478931-54479202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr6:60143961-60144251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
54, 224
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chr6:60468469-60468173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
195-499
               

               
Cow position:
               
chr6:693907-694223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 230
               

               
Conread position:
               
195-512
               

               
Cow position:
               
chr6:37332349-37332018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
195-519
               

               
Cow position:
               
chr6:68376077-68376417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
195-522
               

               
Cow position:
               
chr6:18117810-18118149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 174
               

               
Conread position:
               
195-533
               

               
Cow position:
               
chr6:59602977-59603317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
195-546
               

               
Cow position:
               
chr6:19293036-19292676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 261
               

               
Conread position:
               
195-552
               

               
Cow position:
               
chr6:62670109-62669745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
195-580
               

               
Cow position:
               
chr6:57545991-57546369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
195-621
               

               
Cow position:
               
chr6:21456439-21456885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
195-626
               

               
Cow position:
               
chr6:53024573-53024998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 259
               

               
Conread position:
               
195-628
               

               
Cow position:
               
chr6:10399670-10400097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
195-645
               

               
Cow position:
               
chr6:56376133-56376570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
195-647
               

               
Cow position:
               
chr6:46859933-46860392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
195-649
               

               
Cow position:
               
chr6:45064797-45065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
195-650
               

               
Cow position:
               
chr6:24468161-24468620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 210
               

               
Conread position:
               
195-656
               

               
Cow position:
               
chr6:3929561-3929088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
195-656
               

               
Cow position:
               
chr6:13040691-13040218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
195-661
               

               
Cow position:
               
chr6:9736407-9736878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
195-678
               

               
Cow position:
               
chr6:49421558-49422038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
195-726
               

               
Cow position:
               
chr6:611782-611264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
195-763
               

               
Cow position:
               
chr6:19427665-19427109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 32
               

               
Conread position:
               
195-776
               

               
Cow position:
               
chr6:5609204-5609803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
195-782
               

               
Cow position:
               
chr6:10105745-10106360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
195-788
               

               
Cow position:
               
chr6:52430781-52431399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 245
               

               
Conread position:
               
195-792
               

               
Cow position:
               
chr6:11192242-11192820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
195-792
               

               
Cow position:
               
chr6:32287869-32287249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
195-793
               

               
Cow position:
               
chr6:10613068-10612486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
195-793
               

               
Cow position:
               
chr6:17090818-17090216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
195-793
               

               
Cow position:
               
chr6:56850255-56849625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
195-793
               

               
Cow position:
               
chr6:65871269-65870655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
195-794
               

               
Cow position:
               
chr6:143140-143731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
195-794
               

               
Cow position:
               
chr6:23696232-23695626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
195-794
               

               
Cow position:
               
chr6:29210715-29210130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
195-794
               

               
Cow position:
               
chr6:36652637-36652052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 54
               

               
Conread position:
               
196-420
               

               
Cow position:
               
chr6:61110019-61109789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
196-456
               

               
Cow position:
               
chr6:60265931-60266215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 226
               

               
Conread position:
               
196-491
               

               
Cow position:
               
chr6:9302486-9302784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
196-650
               

               
Cow position:
               
chr6:67951194-67950731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
196-794
               

               
Cow position:
               
chr6:38771508-38770933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
197-650
               

               
Cow position:
               
chr6:44194320-44194773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
198-452
               

               
Cow position:
               
chr6:41655820-41656073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
198-459
               

               
Cow position:
               
chr6:2899349-2899607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
198-562
               

               
Cow position:
               
chr6:47616405-47616748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
222, 41
               

               
Conread position:
               
198-562
               

               
Cow position:
               
chr6:55892970-55892627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
278, 54
               

               
Conread position:
               
198-585
               

               
Cow position:
               
chr6:19264266-19264658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
198-598
               

               
Cow position:
               
chr6:52901452-52901070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
198-622
               

               
Cow position:
               
chr6:37199281-37199741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
198-625
               

               
Cow position:
               
chr6:57404901-57405323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
198-628
               

               
Cow position:
               
chr6:17997082-17997517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
198-628
               

               
Cow position:
               
chr6:35436222-35435801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
198-644
               

               
Cow position:
               
chr6:38207250-38207717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
198-649
               

               
Cow position:
               
chr6:31564117-31564560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
198-649
               

               
Cow position:
               
chr6:37149417-37148970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
198-667
               

               
Cow position:
               
chr6:38853421-38853903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 227
               

               
Conread position:
               
198-762
               

               
Cow position:
               
chr6:36196437-36195874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
198-781
               

               
Cow position:
               
chr6:2547496-2546885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 289
               

               
Conread position:
               
198-792
               

               
Cow position:
               
chr6:32268652-32269225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 167
               

               
Conread position:
               
198-792
               

               
Cow position:
               
chr6:36470343-36470937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
198-794
               

               
Cow position:
               
chr6:24031598-24031003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
199-468
               

               
Cow position:
               
chr6:47305938-47306183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
199-633
               

               
Cow position:
               
chr6:15782299-15782732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
199-650
               

               
Cow position:
               
chr6:2583094-2582647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
199-705
               

               
Cow position:
               
chr6:6264886-6264363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 282
               

               
Conread position:
               
199-714
               

               
Cow position:
               
chr6:34195928-34196440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
199-794
               

               
Cow position:
               
chr6:29485317-29484740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 226
               

               
Conread position:
               
199-794
               

               
Cow position:
               
chr6:49398395-49398989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
200-517
               

               
Cow position:
               
chr6:17794522-17794850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 241
               

               
Conread position:
               
204-580
               

               
Cow position:
               
chr6:19754849-19755230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
204-770
               

               
Cow position:
               
chr6:24004749-24004199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
206-472
               

               
Cow position:
               
chr6:68816397-68816117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
206-622
               

               
Cow position:
               
chr6:5113820-5114243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
207-661
               

               
Cow position:
               
chr6:41375996-41375514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
207-694
               

               
Cow position:
               
chr6:54133037-54132547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 197
               

               
Conread position:
               
207-771
               

               
Cow position:
               
chr6:63047802-63047228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
207-794
               

               
Cow position:
               
chr6:39093971-39093391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 335
               

               
Conread position:
               
208-621
               

               
Cow position:
               
chr6:12091761-12092179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 229
               

               
Conread position:
               
208-659
               

               
Cow position:
               
chr6:4383699-4383257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
208-793
               

               
Cow position:
               
chr6:51835623-51835032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 178
               

               
Conread position:
               
208-794
               

               
Cow position:
               
chr6:46292130-46292697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr6:28999733-29000058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
209-621
               

               
Cow position:
               
chr6:63720416-63720004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr6:34119140-34119390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
210-535
               

               
Cow position:
               
chr6:61523981-61524310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
211-562
               

               
Cow position:
               
chr6:67617725-67618094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
213-521
               

               
Cow position:
               
chr6:9718697-9719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chr6:58459936-58459717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
214-773
               

               
Cow position:
               
chr6:35842879-35842310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
216-625
               

               
Cow position:
               
chr6:21736685-21737081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
217-451
               

               
Cow position:
               
chr6:36920759-36921003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
32, 152
               

               
Conread position:
               
220-661
               

               
Cow position:
               
chr6:26915541-26915091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
222-492
               

               
Cow position:
               
chr6:67643478-67643760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
224-794
               

               
Cow position:
               
chr6:40774125-40774742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 346
               

               
Conread position:
               
228-469
               

               
Cow position:
               
chr6:31078663-31078918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 212
               

               
Conread position:
               
235-507
               

               
Cow position:
               
chr6:20929331-20929600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
242-451
               

               
Cow position:
               
chr6:54217250-54217456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
247-699
               

               
Cow position:
               
chr6:40713325-40713775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
251-793
               

               
Cow position:
               
chr6:5302246-5302769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
253-468
               

               
Cow position:
               
chr6:1422653-1422440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
192, 63
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr6:61168920-61168644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
257-596
               

               
Cow position:
               
chr6:51969241-51968890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
257-621
               

               
Cow position:
               
chr6:7989255-7989608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
257-794
               

               
Cow position:
               
chr6:18048853-18049397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
258-792
               

               
Cow position:
               
chr6:51675074-51674540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
260-794
               

               
Cow position:
               
chr6:31635519-31636066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
286-640
               

               
Cow position:
               
chr6:59069487-59069841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
301-794
               

               
Cow position:
               
chr6:67214871-67214370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
303-792
               

               
Cow position:
               
chr6:52248010-52248492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
311-645
               

               
Cow position:
               
chr6:7173639-7173987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
312-585
               

               
Cow position:
               
chr6:58590383-58590116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
313-650
               

               
Cow position:
               
chr6:32421256-32420907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
313-764
               

               
Cow position:
               
chr6:66531713-66532144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 29
               

               
Conread position:
               
314-636
               

               
Cow position:
               
chr6:9452662-9452983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 116
               

               
Conread position:
               
315-443
               

               
Cow position:
               
chr6:53090116-53089987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
315-452
               

               
Cow position:
               
chr6:12197287-12197148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
315-462
               

               
Cow position:
               
chr6:32517002-32517139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
315-468
               

               
Cow position:
               
chr6:32853294-32853141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
315-473
               

               
Cow position:
               
chr6:68652244-68652403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
315-484
               

               
Cow position:
               
chr6:61142455-61142625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
315-485
               

               
Cow position:
               
chr6:59770331-59770165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
315-502
               

               
Cow position:
               
chr6:60516932-60516749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
315-519
               

               
Cow position:
               
chr6:66375226-66375426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
315-539
               

               
Cow position:
               
chr6:58597399-58597620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 132
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr6:12845482-12845262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
315-543
               

               
Cow position:
               
chr6:377232-377011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr6:50976155-50975936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
315-550
               

               
Cow position:
               
chr6:54573366-54573116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
315-552
               

               
Cow position:
               
chr6:17245506-17245739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
315-559
               

               
Cow position:
               
chr6:21235150-21234908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
315-564
               

               
Cow position:
               
chr6:15022440-15022698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
172, 211
               

               
Conread position:
               
315-566
               

               
Cow position:
               
chr6:582166-582406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
315-580
               

               
Cow position:
               
chr6:61608619-61608354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-587
               

               
Cow position:
               
chr6:48112303-48112044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
315-594
               

               
Cow position:
               
chr6:47640325-47640604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-601
               

               
Cow position:
               
chr6:35993691-35993403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 97
               

               
Conread position:
               
315-614
               

               
Cow position:
               
chr6:47799400-47799110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 220
               

               
Conread position:
               
315-625
               

               
Cow position:
               
chr6:8787930-8788236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
315-625
               

               
Cow position:
               
chr6:63298924-63299222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
113, 98
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr6:6098159-6098484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
73, 229
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr6:21869542-21869847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 144
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr6:28318504-28318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr6:38641599-38641296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
315-628
               

               
Cow position:
               
chr6:66874458-66874160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
315-629
               

               
Cow position:
               
chr6:528177-528479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
288, 85
               

               
Conread position:
               
315-638
               

               
Cow position:
               
chr6:53652147-53651824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 72
               

               
Conread position:
               
315-639
               

               
Cow position:
               
chr6:35613310-35613626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
315-646
               

               
Cow position:
               
chr6:23247859-23248187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
315-650
               

               
Cow position:
               
chr6:60350185-60350527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
315-651
               

               
Cow position:
               
chr6:49002633-49002953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
315-655
               

               
Cow position:
               
chr6:38614919-38614596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
315-663
               

               
Cow position:
               
chr6:20097852-20098205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 238
               

               
Conread position:
               
315-665
               

               
Cow position:
               
chr6:54990894-54991235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
315-671
               

               
Cow position:
               
chr6:27110704-27110340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
315-708
               

               
Cow position:
               
chr6:57164536-57164141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 229
               

               
Conread position:
               
315-721
               

               
Cow position:
               
chr6:60057548-60057964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 105
               

               
Conread position:
               
315-725
               

               
Cow position:
               
chr6:31526153-31525749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
315-762
               

               
Cow position:
               
chr6:54867624-54867179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 217
               

               
Conread position:
               
315-791
               

               
Cow position:
               
chr6:8209498-8209952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 66
               

               
Conread position:
               
315-793
               

               
Cow position:
               
chr6:46571212-46570755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 72
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:1886560-1887019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:12551376-12550896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:28976933-28977421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:35103221-35103694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 192
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:47339249-47339735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 122
               

               
Conread position:
               
315-794
               

               
Cow position:
               
chr6:56843261-56842788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
316-534
               

               
Cow position:
               
chr6:51526595-51526380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
316-538
               

               
Cow position:
               
chr6:55209663-55209441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
182, 35
               

               
Conread position:
               
316-539
               

               
Cow position:
               
chr6:21514502-21514735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
316-544
               

               
Cow position:
               
chr6:17704937-17704698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
316-545
               

               
Cow position:
               
chr6:16266830-16266597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
316-550
               

               
Cow position:
               
chr6:50467241-50467008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
316-553
               

               
Cow position:
               
chr6:60667519-60667291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
186, 96
               

               
Conread position:
               
316-554
               

               
Cow position:
               
chr6:20206381-20206145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
316-557
               

               
Cow position:
               
chr6:3081010-3081265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
316-559
               

               
Cow position:
               
chr6:16261884-16261650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 70
               

               
Conread position:
               
316-562
               

               
Cow position:
               
chr6:48010421-48010660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
316-568
               

               
Cow position:
               
chr6:1371120-1371373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
134, 111
               

               
Conread position:
               
316-573
               

               
Cow position:
               
chr6:16316422-16316160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 218
               

               
Conread position:
               
316-574
               

               
Cow position:
               
chr6:57571585-57571326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
316-575
               

               
Cow position:
               
chr6:54036037-54036283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
316-579
               

               
Cow position:
               
chr6:4691869-4692136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
316-580
               

               
Cow position:
               
chr6:67323415-67323163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
316-583
               

               
Cow position:
               
chr6:50984328-50984068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
187, 92
               

               
Conread position:
               
316-591
               

               
Cow position:
               
chr6:60783976-60783706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
161, 177
               

               
Conread position:
               
316-592
               

               
Cow position:
               
chr6:60850274-60850555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
316-594
               

               
Cow position:
               
chr6:31854460-31854185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
316-599
               

               
Cow position:
               
chr6:54936685-54936405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
186, 92
               

               
Conread position:
               
316-601
               

               
Cow position:
               
chr6:1499749-1499464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
316-621
               

               
Cow position:
               
chr6:52412965-52412659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
316-628
               

               
Cow position:
               
chr6:16746449-16746138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 98
               

               
Conread position:
               
316-628
               

               
Cow position:
               
chr6:54864555-54864868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
316-637
               

               
Cow position:
               
chr6:22502805-22503133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
177, 98
               

               
Conread position:
               
316-650
               

               
Cow position:
               
chr6:28414541-28414867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 115
               

               
Conread position:
               
316-650
               

               
Cow position:
               
chr6:63286399-63286738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
316-651
               

               
Cow position:
               
chr6:130057-130393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
316-656
               

               
Cow position:
               
chr6:54600454-54600134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
108, 156
               

               
Conread position:
               
316-661
               

               
Cow position:
               
chr6:54430936-54430579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
316-672
               

               
Cow position:
               
chr6:58732197-58732562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
316-694
               

               
Cow position:
               
chr6:48282098-48281723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 125
               

               
Conread position:
               
316-714
               

               
Cow position:
               
chr6:54368798-54369188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 97
               

               
Conread position:
               
316-719
               

               
Cow position:
               
chr6:63272505-63272914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
316-724
               

               
Cow position:
               
chr6:561733-561318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
316-734
               

               
Cow position:
               
chr6:60859195-60859615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
316-790
               

               
Cow position:
               
chr6:42565794-42565317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 85
               

               
Conread position:
               
316-793
               

               
Cow position:
               
chr6:66363129-66363616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
316-794
               

               
Cow position:
               
chr6:1770092-1770566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 98
               

               
Conread position:
               
316-794
               

               
Cow position:
               
chr6:53178735-53178267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
316-794
               

               
Cow position:
               
chr6:60673671-60673176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
317-502
               

               
Cow position:
               
chr6:23465929-23466108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
317-628
               

               
Cow position:
               
chr6:66131411-66131106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
317-634
               

               
Cow position:
               
chr6:6401056-6400741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
317-793
               

               
Cow position:
               
chr6:9750952-9751422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 21
               

               
Conread position:
               
318-423
               

               
Cow position:
               
chr6:20485591-20485696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-532
               

               
Cow position:
               
chr6:54208031-54208248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
318-589
               

               
Cow position:
               
chr6:12542827-12543095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
319-589
               

               
Cow position:
               
chr6:24934523-24934792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
183, 112
               

               
Conread position:
               
319-670
               

               
Cow position:
               
chr6:20330111-20329773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 105
               

               
Conread position:
               
319-792
               

               
Cow position:
               
chr6:11169804-11169338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
320-490
               

               
Cow position:
               
chr6:7170246-7170414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
320-596
               

               
Cow position:
               
chr6:63093813-63094099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
320-794
               

               
Cow position:
               
chr6:6642506-6642957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 58
               

               
Conread position:
               
321-622
               

               
Cow position:
               
chr6:16423803-16423503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
324-496
               

               
Cow position:
               
chr6:36493443-36493622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
324-590
               

               
Cow position:
               
chr6:59109043-59108779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
325-774
               

               
Cow position:
               
chr6:65871987-65871567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
277, 69
               

               
Conread position:
               
326-543
               

               
Cow position:
               
chr6:44127708-44127486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
328-619
               

               
Cow position:
               
chr6:53519530-53519816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
328-794
               

               
Cow position:
               
chr6:1944807-1944358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
329-793
               

               
Cow position:
               
chr6:24962238-24961796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
330-487
               

               
Cow position:
               
chr6:67615338-67615495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr6:12829134-12829352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
335-622
               

               
Cow position:
               
chr6:16191765-16191471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 238
               

               
Conread position:
               
341-794
               

               
Cow position:
               
chr6:49410616-49411051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 95
               

               
Conread position:
               
342-621
               

               
Cow position:
               
chr6:48187503-48187776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
342-645
               

               
Cow position:
               
chr6:21542403-21542097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
346-794
               

               
Cow position:
               
chr6:18961439-18961892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 216
               

               
Conread position:
               
348-745
               

               
Cow position:
               
chr6:67045026-67044648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
352-549
               

               
Cow position:
               
chr6:38234029-38233834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
353-631
               

               
Cow position:
               
chr6:47989241-47988981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
268, 61
               

               
Conread position:
               
354-580
               

               
Cow position:
               
chr6:49694447-49694222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
355-794
               

               
Cow position:
               
chr6:44099154-44098716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
358-792
               

               
Cow position:
               
chr6:9323213-9322770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 55
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr6:40834406-40834632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-553
               

               
Cow position:
               
chr6:30123127-30123322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
363-505
               

               
Cow position:
               
chr6:54364939-54365085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
363-591
               

               
Cow position:
               
chr6:44984389-44984162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
363-599
               

               
Cow position:
               
chr6:9839231-9838990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 190
               

               
Conread position:
               
363-645
               

               
Cow position:
               
chr6:7824825-7824540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
364-622
               

               
Cow position:
               
chr6:53731582-53731325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 182
               

               
Conread position:
               
364-726
               

               
Cow position:
               
chr6:58316107-58315743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
364-794
               

               
Cow position:
               
chr6:12630079-12629645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
365-639
               

               
Cow position:
               
chr6:6460599-6460325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 49
               

               
Conread position:
               
365-649
               

               
Cow position:
               
chr6:6994894-6995171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 114
               

               
Conread position:
               
366-724
               

               
Cow position:
               
chr6:57504820-57504462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
366-794
               

               
Cow position:
               
chr6:42519039-42518598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
367-720
               

               
Cow position:
               
chr6:58173240-58172890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
368-794
               

               
Cow position:
               
chr6:11159949-11160395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
369-601
               

               
Cow position:
               
chr6:49604729-49604509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
369-645
               

               
Cow position:
               
chr6:25773332-25773604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
369-665
               

               
Cow position:
               
chr6:3374512-3374812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
369-711
               

               
Cow position:
               
chr6:62479107-62479454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
369-763
               

               
Cow position:
               
chr6:23986692-23987074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
369-766
               

               
Cow position:
               
chr6:58606338-58605938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
369-794
               

               
Cow position:
               
chr6:16738072-16737649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
369-794
               

               
Cow position:
               
chr6:36928714-36928280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 178
               

               
Conread position:
               
370-635
               

               
Cow position:
               
chr6:52025598-52025864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
370-763
               

               
Cow position:
               
chr6:13592761-13592389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
371-794
               

               
Cow position:
               
chr6:60456880-60456459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
373-573
               

               
Cow position:
               
chr6:29266253-29266059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
373-794
               

               
Cow position:
               
chr6:3978613-3979033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr6:603144-602963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
378-663
               

               
Cow position:
               
chr6:48344377-48344087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
378-794
               

               
Cow position:
               
chr6:642522-642965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
379-546
               

               
Cow position:
               
chr6:1510634-1510465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
379-639
               

               
Cow position:
               
chr6:5462015-5462265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
379-672
               

               
Cow position:
               
chr6:53711158-53710866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
379-794
               

               
Cow position:
               
chr6:16411234-16410826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
379-796
               

               
Cow position:
               
chr6:6614480-6614061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
381-744
               

               
Cow position:
               
chr6:3936593-3936225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
382-621
               

               
Cow position:
               
chr6:10254281-10254045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
382-632
               

               
Cow position:
               
chr6:18968740-18968981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
221, 32
               

               
Conread position:
               
382-734
               

               
Cow position:
               
chr6:20230786-20231137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
382-764
               

               
Cow position:
               
chr6:58076270-58075886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
382-794
               

               
Cow position:
               
chr6:14838985-14839397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
382-794
               

               
Cow position:
               
chr6:47540572-47540153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
383-565
               

               
Cow position:
               
chr6:357847-358032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
383-585
               

               
Cow position:
               
chr6:67633812-67634012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
383-611
               

               
Cow position:
               
chr6:60446301-60446073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
383-649
               

               
Cow position:
               
chr6:49685624-49685358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 123
               

               
Conread position:
               
384-595
               

               
Cow position:
               
chr6:58363970-58364180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 158
               

               
Conread position:
               
387-562
               

               
Cow position:
               
chr6:55508539-55508715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
387-628
               

               
Cow position:
               
chr6:48425289-48425523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
388-794
               

               
Cow position:
               
chr6:67544262-67544664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
391-589
               

               
Cow position:
               
chr6:54492418-54492621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
392-793
               

               
Cow position:
               
chr6:23117365-23117770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
395-504
               

               
Cow position:
               
chr6:63168974-63169083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
395-521
               

               
Cow position:
               
chr6:61644804-61644934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
398-589
               

               
Cow position:
               
chr6:21610873-21610685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
398-639
               

               
Cow position:
               
chr6:416126-415882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
9, 219
               

               
Conread position:
               
398-640
               

               
Cow position:
               
chr6:59728747-59728503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
398-677
               

               
Cow position:
               
chr6:51246978-51246696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr6:12390120-12389803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
217, 29
               

               
Conread position:
               
398-776
               

               
Cow position:
               
chr6:26413403-26413029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
398-785
               

               
Cow position:
               
chr6:15136998-15137390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
398-792
               

               
Cow position:
               
chr6:707170-706774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
398-794
               

               
Cow position:
               
chr6:8206362-8205965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
398-794
               

               
Cow position:
               
chr6:20552078-20552475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
398-794
               

               
Cow position:
               
chr6:35872559-35872957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
398-794
               

               
Cow position:
               
chr6:51718731-51718333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
399-649
               

               
Cow position:
               
chr6:10636198-10635950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
399-699
               

               
Cow position:
               
chr6:1273339-1273634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
199, 22
               

               
Conread position:
               
399-770
               

               
Cow position:
               
chr6:27870800-27870414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
400-596
               

               
Cow position:
               
chr6:37739212-37739017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
400-794
               

               
Cow position:
               
chr6:6769296-6768905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
401-794
               

               
Cow position:
               
chr6:66566481-66566084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
403-792
               

               
Cow position:
               
chr6:3720008-3719614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
404-695
               

               
Cow position:
               
chr6:13603484-13603194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
404-794
               

               
Cow position:
               
chr6:6181552-6181948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
405-536
               

               
Cow position:
               
chr6:56848896-56849030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
405-628
               

               
Cow position:
               
chr6:28079880-28080099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
406-596
               

               
Cow position:
               
chr6:53453792-53453599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
406-726
               

               
Cow position:
               
chr6:6722118-6721817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
406-794
               

               
Cow position:
               
chr6:16594097-16593722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
406-794
               

               
Cow position:
               
chr6:54647502-54647897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
408-637
               

               
Cow position:
               
chr6:15922983-15923212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
408-722
               

               
Cow position:
               
chr6:49647064-49647384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
409-643
               

               
Cow position:
               
chr6:30786141-30786369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
194, 80
               

               
Conread position:
               
414-637
               

               
Cow position:
               
chr6:1889081-1889296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
189, 48
               

               
Conread position:
               
414-781
               

               
Cow position:
               
chr6:875313-875684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
414-793
               

               
Cow position:
               
chr6:24652183-24652551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
414-794
               

               
Cow position:
               
chr6:33851788-33852161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
206, 63
               

               
Conread position:
               
416-579
               

               
Cow position:
               
chr6:30481019-30480860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 103
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr6:17345374-17345149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
416-794
               

               
Cow position:
               
chr6:10332083-10332480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
417-621
               

               
Cow position:
               
chr6:33277050-33276844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 160
               

               
Conread position:
               
417-675
               

               
Cow position:
               
chr6:66235489-66235224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
417-760
               

               
Cow position:
               
chr6:54981117-54980764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
417-794
               

               
Cow position:
               
chr6:1890837-1891236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
418-656
               

               
Cow position:
               
chr6:39994456-39994695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 56
               

               
Conread position:
               
419-578
               

               
Cow position:
               
chr6:67574407-67574256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
419-590
               

               
Cow position:
               
chr6:32986994-32987161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 105
               

               
Conread position:
               
420-625
               

               
Cow position:
               
chr6:46400408-46400604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
420-628
               

               
Cow position:
               
chr6:61130474-61130684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
420-770
               

               
Cow position:
               
chr6:57686157-57685812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
421-635
               

               
Cow position:
               
chr6:8187516-8187730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
421-677
               

               
Cow position:
               
chr6:54294110-54293856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 112
               

               
Conread position:
               
421-793
               

               
Cow position:
               
chr6:32210626-32210997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 134
               

               
Conread position:
               
422-649
               

               
Cow position:
               
chr6:30826031-30826261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
119, 142
               

               
Conread position:
               
422-716
               

               
Cow position:
               
chr6:40264199-40264487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
424-644
               

               
Cow position:
               
chr6:66453798-66453578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
425-790
               

               
Cow position:
               
chr6:2013017-2012654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 111
               

               
Conread position:
               
427-586
               

               
Cow position:
               
chr6:50020533-50020371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
427-794
               

               
Cow position:
               
chr6:10605684-10605312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
428-576
               

               
Cow position:
               
chr6:22253989-22254136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
429-661
               

               
Cow position:
               
chr6:40138722-40138944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
432-586
               

               
Cow position:
               
chr6:633365-633520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
432-626
               

               
Cow position:
               
chr6:57540225-57540030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 139
               

               
Conread position:
               
432-628
               

               
Cow position:
               
chr6:1835599-1835402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
432-680
               

               
Cow position:
               
chr6:46627979-46628236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
432-684
               

               
Cow position:
               
chr6:11771916-11772171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
432-698
               

               
Cow position:
               
chr6:2832883-2833151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
432-792
               

               
Cow position:
               
chr6:43188888-43188523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:47415-47777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 188
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:2185357-2185724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:11720782-11721150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:22507732-22507374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:28343639-28343279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:34842564-34842931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:36532420-36532053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 310
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:41232605-41232240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:48872217-48872578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:60877441-60877073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
432-794
               

               
Cow position:
               
chr6:64721284-64720925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
433-719
               

               
Cow position:
               
chr6:55578156-55577869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
433-794
               

               
Cow position:
               
chr6:55538132-55538495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
433-794
               

               
Cow position:
               
chr6:58748205-58747839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 261
               

               
Conread position:
               
436-600
               

               
Cow position:
               
chr6:64389028-64388865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
436-670
               

               
Cow position:
               
chr6:56350163-56349922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
437-562
               

               
Cow position:
               
chr6:46280383-46280260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
438-602
               

               
Cow position:
               
chr6:18904356-18904518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 85
               

               
Conread position:
               
438-642
               

               
Cow position:
               
chr6:21110950-21110749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
438-645
               

               
Cow position:
               
chr6:389155-388948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
165, 104
               

               
Conread position:
               
438-792
               

               
Cow position:
               
chr6:1783792-1784135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
438-794
               

               
Cow position:
               
chr6:57384507-57384132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
439-794
               

               
Cow position:
               
chr6:50119802-50120158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
441-794
               

               
Cow position:
               
chr6:21311766-21312128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 227
               

               
Conread position:
               
442-642
               

               
Cow position:
               
chr6:55366335-55366543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
445-568
               

               
Cow position:
               
chr6:62017511-62017391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
445-610
               

               
Cow position:
               
chr6:62855040-62854874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
446-721
               

               
Cow position:
               
chr6:19508463-19508730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
448-627
               

               
Cow position:
               
chr6:46245342-46245524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
448-793
               

               
Cow position:
               
chr6:46667087-46666736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 137
               

               
Conread position:
               
449-666
               

               
Cow position:
               
chr6:50454958-50454724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
452-698
               

               
Cow position:
               
chr6:59015587-59015839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
461-713
               

               
Cow position:
               
chr6:28559386-28559128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 215
               
Show alignments to all cow chromosomes.