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Cow genome map

           
Conread name:
           
Ova1-OVRM10016H10
        

               
Conread position:
               
133-361
               

               
Cow position:
               
chr16:46429993-46430223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
134-432
               

               
Cow position:
               
chr16:8239706-8240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
142-363
               

               
Cow position:
               
chr16:17903495-17903722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 195
               

               
Conread position:
               
144-482
               

               
Cow position:
               
chr16:38708689-38709035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
144-490
               

               
Cow position:
               
chr16:45139811-45139453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
144-490
               

               
Cow position:
               
chr16:54579312-54578951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr16:48006347-48006722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
148-490
               

               
Cow position:
               
chr16:25170539-25170174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
150-450
               

               
Cow position:
               
chr16:7550108-7549792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
150-482
               

               
Cow position:
               
chr16:3634258-3633907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 310
               

               
Conread position:
               
151-490
               

               
Cow position:
               
chr16:32781504-32781146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
154-299
               

               
Cow position:
               
chr16:24591991-24591843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
154-337
               

               
Cow position:
               
chr16:12010229-12010047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
154-351
               

               
Cow position:
               
chr16:21040168-21039964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
154-360
               

               
Cow position:
               
chr16:496238-496445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr16:3114677-3114465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr16:53792681-53792891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
154-372
               

               
Cow position:
               
chr16:17135862-17135645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
154-434
               

               
Cow position:
               
chr16:17945657-17945362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
154-477
               

               
Cow position:
               
chr16:42444293-42443949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
154-487
               

               
Cow position:
               
chr16:39172010-39172378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
154-489
               

               
Cow position:
               
chr16:5364039-5363677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
154-489
               

               
Cow position:
               
chr16:48190875-48191216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr16:4059491-4059143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr16:20025580-20025228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr16:33054343-33054680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 165
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr16:51578303-51578636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr16:53086202-53086541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
154-566
               

               
Cow position:
               
chr16:15960152-15960583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 361
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr16:17291884-17292060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
155-363
               

               
Cow position:
               
chr16:29527965-29527751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
155-490
               

               
Cow position:
               
chr16:19003395-19003736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
155-490
               

               
Cow position:
               
chr16:41752448-41752789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 23
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr16:935322-935662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr16:9973363-9973718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr16:22804462-22804798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr16:48340559-48340908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
157-291
               

               
Cow position:
               
chr16:16025572-16025435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
157-358
               

               
Cow position:
               
chr16:32807158-32807360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
157-363
               

               
Cow position:
               
chr16:9905224-9905018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
157-480
               

               
Cow position:
               
chr16:10592571-10592234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
158-356
               

               
Cow position:
               
chr16:19052767-19052573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
158-363
               

               
Cow position:
               
chr16:8530749-8530957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
159-286
               

               
Cow position:
               
chr16:20265430-20265559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
159-317
               

               
Cow position:
               
chr16:7723834-7723673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
159-318
               

               
Cow position:
               
chr16:1582792-1582955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
159-322
               

               
Cow position:
               
chr16:21370057-21370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
159-341
               

               
Cow position:
               
chr16:56243754-56243936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
137, 158
               

               
Conread position:
               
159-353
               

               
Cow position:
               
chr16:11584272-11584460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 106
               

               
Conread position:
               
159-357
               

               
Cow position:
               
chr16:31561888-31561685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr16:45122168-45121969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
73, 179
               

               
Conread position:
               
159-362
               

               
Cow position:
               
chr16:11134851-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
159-362
               

               
Cow position:
               
chr16:30305681-30305886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
159-362
               

               
Cow position:
               
chr16:31149509-31149318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr16:12501028-12501234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr16:23955699-23955903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 160
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr16:45813566-45813765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
159-394
               

               
Cow position:
               
chr16:44584307-44584535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
159-425
               

               
Cow position:
               
chr16:47964688-47964966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
159-429
               

               
Cow position:
               
chr16:48613346-48613605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
159-463
               

               
Cow position:
               
chr16:46433191-46433512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
26, 250
               

               
Conread position:
               
159-471
               

               
Cow position:
               
chr16:19644021-19643695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
159-477
               

               
Cow position:
               
chr16:9985260-9985593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
159-477
               

               
Cow position:
               
chr16:27701129-27701444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
159-481
               

               
Cow position:
               
chr16:17143066-17142725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
159-487
               

               
Cow position:
               
chr16:50688654-50688308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 164
               

               
Conread position:
               
159-489
               

               
Cow position:
               
chr16:23681495-23681157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr16:8366698-8367040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr16:13306739-13307082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr16:32301869-32302203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 161
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr16:45785870-45785522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr16:51598480-51598819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
159-502
               

               
Cow position:
               
chr16:48956932-48956568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr16:31117482-31117857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
160-358
               

               
Cow position:
               
chr16:8738196-8737997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
160-360
               

               
Cow position:
               
chr16:8461951-8462148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
160-438
               

               
Cow position:
               
chr16:3304155-3303868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
160-489
               

               
Cow position:
               
chr16:25839752-25839402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 327
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr16:4856970-4857306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr16:35758333-35757997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr16:51112747-51113080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
161-488
               

               
Cow position:
               
chr16:33704937-33704585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr16:7505215-7504883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr16:13689797-13689448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr16:42078716-42079058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
162-314
               

               
Cow position:
               
chr16:11390155-11390311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
162-488
               

               
Cow position:
               
chr16:14106767-14106433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr16:47518975-47518634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 208
               

               
Conread position:
               
165-309
               

               
Cow position:
               
chr16:12324582-12324435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
165-310
               

               
Cow position:
               
chr16:15945128-15945277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
165-362
               

               
Cow position:
               
chr16:9553186-9552989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
165-362
               

               
Cow position:
               
chr16:21317466-21317669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr16:33135064-33134869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr16:34220315-34220111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
165-429
               

               
Cow position:
               
chr16:32969954-32970233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
165-431
               

               
Cow position:
               
chr16:12320351-12320065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
165-445
               

               
Cow position:
               
chr16:7418504-7418213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
165-472
               

               
Cow position:
               
chr16:5257123-5256798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr16:14754196-14754538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr16:47820696-47820355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr16:48095635-48095980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr16:49126058-49126400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
166-287
               

               
Cow position:
               
chr16:19402637-19402759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
166-436
               

               
Cow position:
               
chr16:25387101-25386819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
166-486
               

               
Cow position:
               
chr16:8068698-8069030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
166-488
               

               
Cow position:
               
chr16:29608635-29608304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
166-489
               

               
Cow position:
               
chr16:49169255-49169598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 295
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr16:13578735-13579059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr16:24826199-24825854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 280
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr16:33235036-33235351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr16:52170181-52169850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr16:31078966-31079163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr16:42977590-42977394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
168-363
               

               
Cow position:
               
chr16:44239539-44239331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
168-489
               

               
Cow position:
               
chr16:39616846-39616528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
168-490
               

               
Cow position:
               
chr16:11940161-11939852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
168-490
               

               
Cow position:
               
chr16:32132632-32132312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
168-490
               

               
Cow position:
               
chr16:37669614-37669945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
172-363
               

               
Cow position:
               
chr16:41578348-41578153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
173-327
               

               
Cow position:
               
chr16:12133981-12133822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
173-353
               

               
Cow position:
               
chr16:45294668-45294480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr16:20069951-20069761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr16:10504945-10504759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr16:40514363-40514553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
67, 146
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr16:51501048-51500749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
173-490
               

               
Cow position:
               
chr16:40333207-40333541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
173-490
               

               
Cow position:
               
chr16:48494435-48494772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
173-500
               

               
Cow position:
               
chr16:51697204-51696870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr16:27728378-27728218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr16:30036345-30036167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr16:40700619-40700799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr16:4910407-4910599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr16:22207195-22206999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr16:30358945-30359133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr16:54226482-54226671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
174-457
               

               
Cow position:
               
chr16:17282776-17282484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
174-463
               

               
Cow position:
               
chr16:11806790-11806483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
174-471
               

               
Cow position:
               
chr16:45554561-45554240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr16:13990093-13989784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
174-487
               

               
Cow position:
               
chr16:29655443-29655112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:6379007-6379326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:10039729-10040054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:15824326-15824658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:16597674-16597346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:26649511-26649850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:33646133-33645798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:35188367-35188038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:40562349-40562011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr16:50289268-50288941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr16:20824594-20824417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
175-469
               

               
Cow position:
               
chr16:24855657-24855345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
177-319
               

               
Cow position:
               
chr16:15715844-15715988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
177-340
               

               
Cow position:
               
chr16:28395966-28396133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
177-352
               

               
Cow position:
               
chr16:16816952-16816762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr16:23729802-23729997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr16:34753845-34754032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
177-431
               

               
Cow position:
               
chr16:33198324-33198591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
177-450
               

               
Cow position:
               
chr16:31348651-31348942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr16:39165354-39165037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
177-489
               

               
Cow position:
               
chr16:8315079-8315392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr16:8811981-8812303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
177-496
               

               
Cow position:
               
chr16:13712818-13713137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
178-286
               

               
Cow position:
               
chr16:41806988-41807098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
178-298
               

               
Cow position:
               
chr16:31046566-31046689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
178-319
               

               
Cow position:
               
chr16:32893742-32893598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr16:54709926-54710105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
178-452
               

               
Cow position:
               
chr16:5836699-5836404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 221
               

               
Conread position:
               
178-461
               

               
Cow position:
               
chr16:17289061-17288754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
178-489
               

               
Cow position:
               
chr16:39394682-39394361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:13195225-13195549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
13, 264
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:14242482-14242160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:14568375-14568701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:18353844-18354168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:22919581-22919281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:36203505-36203831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr16:45731278-45731591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
179-360
               

               
Cow position:
               
chr16:21761857-21762041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
179-406
               

               
Cow position:
               
chr16:55233794-55233563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
179-440
               

               
Cow position:
               
chr16:42345500-42345769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
179-473
               

               
Cow position:
               
chr16:45678091-45677776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
179-488
               

               
Cow position:
               
chr16:7076025-7075704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr16:11105665-11105333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr16:11791123-11790797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr16:17745949-17745619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 241
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr16:19408415-19408728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
180-342
               

               
Cow position:
               
chr16:7626271-7626109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
180-363
               

               
Cow position:
               
chr16:42241159-42240977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
180-363
               

               
Cow position:
               
chr16:50667403-50667213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
180-490
               

               
Cow position:
               
chr16:4626279-4626611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
180-490
               

               
Cow position:
               
chr16:4698876-4699186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 247
               

               
Conread position:
               
180-491
               

               
Cow position:
               
chr16:28192165-28191850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
167, 103
               

               
Conread position:
               
181-363
               

               
Cow position:
               
chr16:27160753-27160938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
181-490
               

               
Cow position:
               
chr16:10148393-10148065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
181-490
               

               
Cow position:
               
chr16:48369839-48370164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
183-363
               

               
Cow position:
               
chr16:16571022-16570842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr16:45676753-45677068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr16:56231936-56231607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr16:7980897-7980723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
184-366
               

               
Cow position:
               
chr16:50382428-50382613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
184-472
               

               
Cow position:
               
chr16:41696984-41697289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
184-487
               

               
Cow position:
               
chr16:14125244-14124943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr16:11615137-11615444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr16:33226431-33226748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr16:39474045-39474354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
185-490
               

               
Cow position:
               
chr16:27659639-27659942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
186-489
               

               
Cow position:
               
chr16:48398148-48398461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 243
               

               
Conread position:
               
186-490
               

               
Cow position:
               
chr16:5636690-5636376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
187-363
               

               
Cow position:
               
chr16:12060521-12060344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
187-490
               

               
Cow position:
               
chr16:52834783-52835096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
43, 247
               

               
Conread position:
               
188-363
               

               
Cow position:
               
chr16:50370698-50370523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
190-490
               

               
Cow position:
               
chr16:52889310-52889626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
198-489
               

               
Cow position:
               
chr16:52790148-52789846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 228
               

               
Conread position:
               
198-490
               

               
Cow position:
               
chr16:31122156-31122466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
203-327
               

               
Cow position:
               
chr16:9597362-9597488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
204-490
               

               
Cow position:
               
chr16:39513988-39514294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
204-490
               

               
Cow position:
               
chr16:47643502-47643203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
207-490
               

               
Cow position:
               
chr16:601030-600729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
207-490
               

               
Cow position:
               
chr16:9729280-9728988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
214-488
               

               
Cow position:
               
chr16:13752054-13752337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 246
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr16:45645613-45645816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr16:45753382-45753581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
218-490
               

               
Cow position:
               
chr16:42092315-42092592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
223-458
               

               
Cow position:
               
chr16:24747356-24747118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
237-450
               

               
Cow position:
               
chr16:22123917-22124129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr16:53037583-53037820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
237-481
               

               
Cow position:
               
chr16:39646598-39646348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
237-482
               

               
Cow position:
               
chr16:12085742-12085989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
237-482
               

               
Cow position:
               
chr16:42778017-42777755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr16:8279739-8280005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr16:11274956-11274693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr16:35195560-35195827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
237-563
               

               
Cow position:
               
chr16:29380302-29379968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
238-445
               

               
Cow position:
               
chr16:56853982-56853786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
239-472
               

               
Cow position:
               
chr16:49404108-49404353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
241-434
               

               
Cow position:
               
chr16:50533103-50532903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
254-490
               

               
Cow position:
               
chr16:51556290-51556520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
255-490
               

               
Cow position:
               
chr16:27249439-27249193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
267-490
               

               
Cow position:
               
chr16:33508076-33507847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
267-490
               

               
Cow position:
               
chr16:35168753-35168509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
268-490
               

               
Cow position:
               
chr16:8325445-8325666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
276-490
               

               
Cow position:
               
chr16:23033865-23033653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
296-490
               

               
Cow position:
               
chr16:5293639-5293446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
305-473
               

               
Cow position:
               
chr16:54598236-54598061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
313-493
               

               
Cow position:
               
chr16:4911450-4911628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
322-490
               

               
Cow position:
               
chr16:16544036-16543856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
327-480
               

               
Cow position:
               
chr16:26846183-26846027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
343-490
               

               
Cow position:
               
chr16:47336666-47336514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               
Show alignments to all cow chromosomes.