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Cow genome map

           
Conread name:
           
Ova1-OVRM10016H10
        

               
Conread position:
               
123-372
               

               
Cow position:
               
chr22:8302380-8302629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
133-363
               

               
Cow position:
               
chr22:34104516-34104751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
144-313
               

               
Cow position:
               
chr22:4164122-4163951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr22:9171550-9171331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr22:12678278-12678494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 169
               

               
Conread position:
               
144-393
               

               
Cow position:
               
chr22:31599575-31599328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
149, 92
               

               
Conread position:
               
144-434
               

               
Cow position:
               
chr22:6096873-6097188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
144-473
               

               
Cow position:
               
chr22:41898306-41898651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
144-501
               

               
Cow position:
               
chr22:3317261-3316900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 6
               

               
Conread position:
               
145-363
               

               
Cow position:
               
chr22:17652578-17652357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
145-490
               

               
Cow position:
               
chr22:1591164-1590801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
146-477
               

               
Cow position:
               
chr22:41829102-41829436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 66
               

               
Conread position:
               
150-280
               

               
Cow position:
               
chr22:29325514-29325646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr22:13878315-13878112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
150-367
               

               
Cow position:
               
chr22:28704324-28704106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 167
               

               
Conread position:
               
150-490
               

               
Cow position:
               
chr22:43119593-43119948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
150-560
               

               
Cow position:
               
chr22:17764522-17764089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
151-291
               

               
Cow position:
               
chr22:8327879-8327741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
151-490
               

               
Cow position:
               
chr22:11613564-11613202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
154-288
               

               
Cow position:
               
chr22:45683903-45684040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
154-310
               

               
Cow position:
               
chr22:24063226-24063065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
154-318
               

               
Cow position:
               
chr22:1977883-1977716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
154-326
               

               
Cow position:
               
chr22:23036301-23036123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr22:3950386-3950176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
154-366
               

               
Cow position:
               
chr22:26706673-26706889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr22:8138130-8138469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr22:13841274-13840926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr22:44180724-44180382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
154-488
               

               
Cow position:
               
chr22:10338985-10339330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:846039-845683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:1609638-1609975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:2216942-2216605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:6494298-6493951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:27431571-27431902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:28071690-28071335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:32892828-32892476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:34726799-34726453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:37029474-37029822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr22:41971025-41971376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
154-493
               

               
Cow position:
               
chr22:16044282-16044652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
154-549
               

               
Cow position:
               
chr22:27274566-27274972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
155-490
               

               
Cow position:
               
chr22:2502961-2502618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr22:2623390-2623734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
157-350
               

               
Cow position:
               
chr22:21235307-21235497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
157-358
               

               
Cow position:
               
chr22:6176155-6176361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
157-363
               

               
Cow position:
               
chr22:26123031-26122821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
157-490
               

               
Cow position:
               
chr22:23115177-23115524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
158-297
               

               
Cow position:
               
chr22:16813926-16813787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-489
               

               
Cow position:
               
chr22:38107812-38107478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 104
               

               
Conread position:
               
158-490
               

               
Cow position:
               
chr22:11131000-11130652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 248
               

               
Conread position:
               
159-273
               

               
Cow position:
               
chr22:31309013-31308897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
159-298
               

               
Cow position:
               
chr22:8710244-8710386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr22:26233761-26233611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr22:12902726-12902891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr22:24134199-24134366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
159-355
               

               
Cow position:
               
chr22:1349962-1349755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 179
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr22:898966-898770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr22:10631519-10631311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr22:19827732-19827937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 192
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr22:26056735-26056943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr22:29185479-29185681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr22:285237-285433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr22:1983977-1983778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr22:24903721-24903515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 167
               

               
Conread position:
               
159-362
               

               
Cow position:
               
chr22:9372650-9372445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 174
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr22:4315760-4315552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr22:10553558-10553761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr22:16094776-16094978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr22:24915966-24915761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 138
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr22:28665413-28665210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
159-366
               

               
Cow position:
               
chr22:42618128-42617919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
159-423
               

               
Cow position:
               
chr22:45807962-45807688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
159-445
               

               
Cow position:
               
chr22:877642-877341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
159-452
               

               
Cow position:
               
chr22:31510249-31510549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 186
               

               
Conread position:
               
159-456
               

               
Cow position:
               
chr22:32326929-32326618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 199
               

               
Conread position:
               
159-458
               

               
Cow position:
               
chr22:36432843-36433157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
159-468
               

               
Cow position:
               
chr22:12315939-12315614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 159
               

               
Conread position:
               
159-482
               

               
Cow position:
               
chr22:26786489-26786142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
159-486
               

               
Cow position:
               
chr22:38977970-38977634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
159-487
               

               
Cow position:
               
chr22:3250864-3251207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
159-488
               

               
Cow position:
               
chr22:13957515-13957867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-489
               

               
Cow position:
               
chr22:17852508-17852841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
159-489
               

               
Cow position:
               
chr22:43398131-43397799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:4060818-4061162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:4119433-4119787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:7882681-7882331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:17294808-17295150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:21295596-21295944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:32188725-32189058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 165
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:38439027-38439377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 189
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:44717850-44717491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 273
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr22:44741204-44740884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
159-493
               

               
Cow position:
               
chr22:6720951-6721289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
159-502
               

               
Cow position:
               
chr22:10162098-10161729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
160-294
               

               
Cow position:
               
chr22:1523345-1523210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
160-310
               

               
Cow position:
               
chr22:12974042-12974193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
160-363
               

               
Cow position:
               
chr22:6936386-6936186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
160-363
               

               
Cow position:
               
chr22:43237282-43237483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
160-434
               

               
Cow position:
               
chr22:19173830-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
160-489
               

               
Cow position:
               
chr22:8324363-8324027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr22:5595683-5596010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr22:8877374-8877053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr22:21012512-21012171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr22:28146807-28146465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr22:39507915-39508253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr22:2109500-2109695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr22:34618925-34618723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr22:37947850-37947650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
161-371
               

               
Cow position:
               
chr22:2100819-2101029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 168
               

               
Conread position:
               
161-473
               

               
Cow position:
               
chr22:30999017-30998695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
161-480
               

               
Cow position:
               
chr22:28357153-28356826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
161-482
               

               
Cow position:
               
chr22:34441502-34441846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 257
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr22:24610966-24611295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr22:33485492-33485822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr22:40120754-40121097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr22:25221773-25222125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
162-349
               

               
Cow position:
               
chr22:23440170-23440358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr22:617247-617045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
162-412
               

               
Cow position:
               
chr22:17224544-17224805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
162-490
               

               
Cow position:
               
chr22:14365835-14366173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
162-490
               

               
Cow position:
               
chr22:40349466-40349131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
162-491
               

               
Cow position:
               
chr22:41982596-41982935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
165-314
               

               
Cow position:
               
chr22:33948847-33949000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
165-317
               

               
Cow position:
               
chr22:30253326-30253168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
165-351
               

               
Cow position:
               
chr22:1501016-1500825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
165-425
               

               
Cow position:
               
chr22:42635310-42635585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
165-438
               

               
Cow position:
               
chr22:6327644-6327933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 258
               

               
Conread position:
               
165-438
               

               
Cow position:
               
chr22:6709671-6709941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
165-450
               

               
Cow position:
               
chr22:4373167-4372867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:4563486-4563143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:15090866-15090521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:22613227-22612893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:25361607-25361271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:31646614-31646275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr22:43812316-43812637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
166-362
               

               
Cow position:
               
chr22:12981603-12981798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr22:28640030-28640226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr22:1871218-1871014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
166-450
               

               
Cow position:
               
chr22:10567592-10567878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr22:20626960-20626622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr22:21890238-21890579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr22:1309612-1309951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
167-488
               

               
Cow position:
               
chr22:2404002-2403655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
167-490
               

               
Cow position:
               
chr22:23249607-23249932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
167-490
               

               
Cow position:
               
chr22:30049445-30049792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
168-318
               

               
Cow position:
               
chr22:14141222-14141375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
168-362
               

               
Cow position:
               
chr22:13222237-13222037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
168-425
               

               
Cow position:
               
chr22:1563133-1563404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
168-490
               

               
Cow position:
               
chr22:28057930-28058262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
169-476
               

               
Cow position:
               
chr22:3367302-3366992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
170-363
               

               
Cow position:
               
chr22:26141392-26141200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
172-435
               

               
Cow position:
               
chr22:24628542-24628814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
172-490
               

               
Cow position:
               
chr22:1067796-1068135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr22:1026005-1025811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr22:10416350-10416151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
173-490
               

               
Cow position:
               
chr22:6215441-6215773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
173-491
               

               
Cow position:
               
chr22:15950271-15950597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
174-294
               

               
Cow position:
               
chr22:22606339-22606217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
174-324
               

               
Cow position:
               
chr22:10557393-10557244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr22:9597466-9597656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr22:38320570-38320754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr22:21527026-21526841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
174-433
               

               
Cow position:
               
chr22:43131444-43131713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
174-451
               

               
Cow position:
               
chr22:10532614-10532323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
60, 275
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr22:24066119-24066451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
174-489
               

               
Cow position:
               
chr22:1326532-1326200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
174-489
               

               
Cow position:
               
chr22:10122493-10122170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
174-489
               

               
Cow position:
               
chr22:28351555-28351874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:534613-534274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:3301225-3301543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 148
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:3842731-3842408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:4017587-4017256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:5616415-5616080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:8357700-8357395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:9127522-9127183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:15490768-15490440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:25742835-25743171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:36193947-36193642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr22:40072091-40071750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr22:47927855-47927536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr22:21502858-21502505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
175-490
               

               
Cow position:
               
chr22:10315190-10314858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
175-490
               

               
Cow position:
               
chr22:10323993-10323687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
175-490
               

               
Cow position:
               
chr22:23857159-23856829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr22:10918463-10918648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
177-363
               

               
Cow position:
               
chr22:14214255-14214439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
177-433
               

               
Cow position:
               
chr22:30818323-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
177-473
               

               
Cow position:
               
chr22:43743234-43743532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr22:12803274-12803592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 229
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr22:10295146-10294831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr22:14245338-14245644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
177-490
               

               
Cow position:
               
chr22:17949861-17950176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
178-331
               

               
Cow position:
               
chr22:33985693-33985844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 64
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr22:25387437-25387247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
178-363
               

               
Cow position:
               
chr22:12341306-12341119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
178-488
               

               
Cow position:
               
chr22:10633024-10632698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr22:13300521-13300190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr22:13861686-13861369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr22:14178717-14179051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 178
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr22:18259328-18259009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
178-490
               

               
Cow position:
               
chr22:19775324-19775645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
179-318
               

               
Cow position:
               
chr22:1838419-1838277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr22:12527013-12527199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
179-365
               

               
Cow position:
               
chr22:4137542-4137729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
179-457
               

               
Cow position:
               
chr22:590448-590149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
179-463
               

               
Cow position:
               
chr22:18020925-18021217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
179-473
               

               
Cow position:
               
chr22:30269517-30269211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr22:21355032-21355351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
179-482
               

               
Cow position:
               
chr22:18838364-18838039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:10684982-10685307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:15039073-15039404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:15567907-15568237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 155
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:26659151-26658836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
184, 64
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:27171154-27171477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr22:34750782-34750458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 148
               

               
Conread position:
               
180-362
               

               
Cow position:
               
chr22:1659271-1659087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
180-473
               

               
Cow position:
               
chr22:1651601-1651310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
180-490
               

               
Cow position:
               
chr22:8481752-8481428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
180-490
               

               
Cow position:
               
chr22:29290036-29290356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
180-491
               

               
Cow position:
               
chr22:17152785-17152459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
182-490
               

               
Cow position:
               
chr22:40048660-40048344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr22:4645876-4645558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr22:9977914-9977600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
184-363
               

               
Cow position:
               
chr22:864411-864593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
184-412
               

               
Cow position:
               
chr22:34735966-34735727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr22:1289425-1289738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr22:30699282-30698960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
184-491
               

               
Cow position:
               
chr22:10936747-10937053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
185-490
               

               
Cow position:
               
chr22:7967805-7967478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
186-362
               

               
Cow position:
               
chr22:12157742-12157918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
186-363
               

               
Cow position:
               
chr22:21393211-21393395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
186-376
               

               
Cow position:
               
chr22:12686584-12686769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr22:10669372-10669598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
187-355
               

               
Cow position:
               
chr22:10835390-10835553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
187-440
               

               
Cow position:
               
chr22:14638376-14638649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 236
               

               
Conread position:
               
187-476
               

               
Cow position:
               
chr22:36633324-36633026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
114, 130
               

               
Conread position:
               
187-490
               

               
Cow position:
               
chr22:40720193-40720507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
190-451
               

               
Cow position:
               
chr22:9283500-9283777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
191-363
               

               
Cow position:
               
chr22:4011281-4011108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
191-363
               

               
Cow position:
               
chr22:21397804-21397981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
199-482
               

               
Cow position:
               
chr22:22160815-22160509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
203-490
               

               
Cow position:
               
chr22:14844658-14844351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
204-490
               

               
Cow position:
               
chr22:28371025-28370727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
208-363
               

               
Cow position:
               
chr22:41979766-41979919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
209-505
               

               
Cow position:
               
chr22:13849374-13849684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
211-490
               

               
Cow position:
               
chr22:11257671-11257955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
214-476
               

               
Cow position:
               
chr22:5675107-5675377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 232
               

               
Conread position:
               
220-490
               

               
Cow position:
               
chr22:3993678-3993391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
233-490
               

               
Cow position:
               
chr22:6960899-6960649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
237-428
               

               
Cow position:
               
chr22:1874742-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
237-437
               

               
Cow position:
               
chr22:226405-226618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr22:10598434-10598197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
237-489
               

               
Cow position:
               
chr22:14882067-14882328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr22:11813674-11813936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr22:13011219-13011496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr22:17992982-17993249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr22:38930458-38930733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr22:43788080-43788348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
239-363
               

               
Cow position:
               
chr22:15753431-15753307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
239-490
               

               
Cow position:
               
chr22:26151065-26151339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
241-458
               

               
Cow position:
               
chr22:39696334-39696101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
254-457
               

               
Cow position:
               
chr22:41270969-41271186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
254-488
               

               
Cow position:
               
chr22:27292123-27291885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
254-490
               

               
Cow position:
               
chr22:10585671-10585920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr22:47582908-47582687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
278-490
               

               
Cow position:
               
chr22:14816423-14816644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
304-494
               

               
Cow position:
               
chr22:3387205-3387404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
347-490
               

               
Cow position:
               
chr22:34986180-34986321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
353-490
               

               
Cow position:
               
chr22:26106978-26106839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
371-490
               

               
Cow position:
               
chr22:33985862-33985985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               
Show alignments to all cow chromosomes.