Cow genome map
| Conread name: | Ova1-OVRM10016H10 |
| Conread position: | 144-345 |
| Cow position: | chr27:31210360-31210559 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 144-490 |
| Cow position: | chr27:22220360-22220726 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 145-430 |
| Cow position: | chr27:26226481-26226178 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 147-490 |
| Cow position: | chr27:27064625-27064267 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 150-365 |
| Cow position: | chr27:12710066-12710272 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 152-362 |
| Cow position: | chr27:23108082-23107873 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 153-358 |
| Cow position: | chr27:24305255-24305462 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 153-363 |
| Cow position: | chr27:15865425-15865640 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 154-317 |
| Cow position: | chr27:788977-788812 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 154-318 |
| Cow position: | chr27:6674100-6674264 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 100 |
| Conread position: | 154-319 |
| Cow position: | chr27:30489591-30489423 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 154-347 |
| Cow position: | chr27:22348309-22348500 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 154-359 |
| Cow position: | chr27:6302648-6302436 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 154-363 |
| Cow position: | chr27:19660752-19660964 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 30 |
| Conread position: | 154-363 |
| Cow position: | chr27:23510803-23511019 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 154-458 |
| Cow position: | chr27:16589883-16589572 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 78, 170 |
| Conread position: | 154-472 |
| Cow position: | chr27:22423338-22423649 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 154-482 |
| Cow position: | chr27:815164-815529 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 188 |
| Conread position: | 154-482 |
| Cow position: | chr27:7212894-7212548 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 154-489 |
| Cow position: | chr27:20795612-20795955 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 154-490 |
| Cow position: | chr27:19717734-19718096 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 155-363 |
| Cow position: | chr27:26407337-26407136 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 155-450 |
| Cow position: | chr27:17331323-17331630 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 155-489 |
| Cow position: | chr27:30407216-30406860 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 155-490 |
| Cow position: | chr27:20628889-20629204 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 146 |
| Conread position: | 159-299 |
| Cow position: | chr27:26323273-26323414 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 126 |
| Conread position: | 159-305 |
| Cow position: | chr27:24223775-24223925 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 159-308 |
| Cow position: | chr27:6106527-6106676 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 159-319 |
| Cow position: | chr27:7343604-7343441 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 159-349 |
| Cow position: | chr27:19508837-19509030 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 159-361 |
| Cow position: | chr27:17918489-17918288 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 149 |
| Conread position: | 159-363 |
| Cow position: | chr27:23452286-23452488 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 74, 106 |
| Conread position: | 159-363 |
| Cow position: | chr27:23485037-23485242 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 159-424 |
| Cow position: | chr27:23594146-23594422 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 86, 159 |
| Conread position: | 159-450 |
| Cow position: | chr27:16103636-16103936 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 159-482 |
| Cow position: | chr27:21669288-21668960 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 159-482 |
| Cow position: | chr27:31219089-31219404 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 74, 92 |
| Conread position: | 159-486 |
| Cow position: | chr27:26959791-26959452 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 159-490 |
| Cow position: | chr27:6550288-6550623 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 75, 106 |
| Conread position: | 159-490 |
| Cow position: | chr27:15454035-15454384 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 159-490 |
| Cow position: | chr27:19387844-19388191 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 159-490 |
| Cow position: | chr27:20758205-20757883 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 56 |
| Conread position: | 159-490 |
| Cow position: | chr27:23483052-23483395 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 160-490 |
| Cow position: | chr27:26643515-26643845 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 94 |
| Conread position: | 161-361 |
| Cow position: | chr27:23560206-23560003 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 175 |
| Conread position: | 161-363 |
| Cow position: | chr27:31148588-31148790 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 161-486 |
| Cow position: | chr27:1291022-1290696 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 161-488 |
| Cow position: | chr27:29798777-29799114 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 161-490 |
| Cow position: | chr27:22418941-22418592 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 161-490 |
| Cow position: | chr27:25276970-25277309 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 162-480 |
| Cow position: | chr27:26238854-26239187 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 162-488 |
| Cow position: | chr27:27389197-27388858 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 259 |
| Conread position: | 162-490 |
| Cow position: | chr27:22179939-22179625 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 162-490 |
| Cow position: | chr27:30354515-30354171 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 165-288 |
| Cow position: | chr27:13204290-13204414 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 165-354 |
| Cow position: | chr27:20897191-20897003 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 88 |
| Conread position: | 165-359 |
| Cow position: | chr27:12459119-12459310 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 165-363 |
| Cow position: | chr27:27694938-27694742 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 133, 32 |
| Conread position: | 165-490 |
| Cow position: | chr27:2592372-2592714 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 276 |
| Conread position: | 165-490 |
| Cow position: | chr27:22035546-22035201 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 165-490 |
| Cow position: | chr27:22171130-22171471 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 165-490 |
| Cow position: | chr27:24446315-24445984 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 165-490 |
| Cow position: | chr27:27136690-27136352 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 165-490 |
| Cow position: | chr27:31231250-31230921 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 166-293 |
| Cow position: | chr27:19576492-19576363 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 166-345 |
| Cow position: | chr27:20812736-20812917 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 158 |
| Conread position: | 166-472 |
| Cow position: | chr27:29494069-29493762 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 164 |
| Conread position: | 166-478 |
| Cow position: | chr27:16780701-16781025 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 166-490 |
| Cow position: | chr27:4672843-4673193 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 285 |
| Conread position: | 166-490 |
| Cow position: | chr27:18507481-18507804 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 140 |
| Conread position: | 167-355 |
| Cow position: | chr27:28242806-28242995 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 148 |
| Conread position: | 167-363 |
| Cow position: | chr27:3306607-3306799 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 167-482 |
| Cow position: | chr27:20828878-20828543 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 167-490 |
| Cow position: | chr27:27856165-27856506 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 168-298 |
| Cow position: | chr27:11466630-11466499 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 168-411 |
| Cow position: | chr27:20481526-20481284 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 168-414 |
| Cow position: | chr27:18767226-18766988 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 168-482 |
| Cow position: | chr27:6073764-6074081 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 170-362 |
| Cow position: | chr27:31378052-31378244 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 172-362 |
| Cow position: | chr27:26999583-26999393 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 173-324 |
| Cow position: | chr27:23942985-23943137 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 142 |
| Conread position: | 173-356 |
| Cow position: | chr27:30846495-30846681 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 173-489 |
| Cow position: | chr27:1768785-1768464 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 173-490 |
| Cow position: | chr27:7412231-7412555 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 150 |
| Conread position: | 173-490 |
| Cow position: | chr27:16284314-16284645 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 173-490 |
| Cow position: | chr27:20068137-20067806 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 174-340 |
| Cow position: | chr27:20485897-20486065 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 174-363 |
| Cow position: | chr27:4720273-4720083 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 174-363 |
| Cow position: | chr27:20517503-20517688 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 174-488 |
| Cow position: | chr27:17397615-17397276 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 174-489 |
| Cow position: | chr27:15409197-15408872 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 174-490 |
| Cow position: | chr27:4813041-4812704 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 174-490 |
| Cow position: | chr27:16705090-16705419 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 139 |
| Conread position: | 174-490 |
| Cow position: | chr27:26984186-26984514 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 231 |
| Conread position: | 175-488 |
| Cow position: | chr27:19685873-19685544 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 176-482 |
| Cow position: | chr27:24321029-24321354 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 177-346 |
| Cow position: | chr27:28478422-28478594 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 57, 157 |
| Conread position: | 177-363 |
| Cow position: | chr27:29504805-29504617 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 177-477 |
| Cow position: | chr27:29431311-29431620 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 177-481 |
| Cow position: | chr27:16478494-16478183 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 178-356 |
| Cow position: | chr27:237114-237293 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 149 |
| Conread position: | 178-356 |
| Cow position: | chr27:29597904-29597727 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 178-462 |
| Cow position: | chr27:426813-427117 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 178-463 |
| Cow position: | chr27:20549868-20549568 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 56, 283 |
| Conread position: | 178-481 |
| Cow position: | chr27:4944671-4944365 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 178-482 |
| Cow position: | chr27:24477260-24477581 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 178-490 |
| Cow position: | chr27:4386218-4385894 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 178-490 |
| Cow position: | chr27:14670539-14670208 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 158 |
| Conread position: | 178-490 |
| Cow position: | chr27:16514014-16513709 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 179-323 |
| Cow position: | chr27:6319763-6319910 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 179-355 |
| Cow position: | chr27:590918-590739 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 135 |
| Conread position: | 179-359 |
| Cow position: | chr27:22422007-22421824 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 179-362 |
| Cow position: | chr27:15378629-15378448 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 179-363 |
| Cow position: | chr27:25721105-25720911 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 179-434 |
| Cow position: | chr27:8405978-8405720 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 179-468 |
| Cow position: | chr27:4835763-4835456 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 179-490 |
| Cow position: | chr27:20037270-20036956 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 179-530 |
| Cow position: | chr27:20641489-20641139 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 180-488 |
| Cow position: | chr27:1498160-1498484 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 180-490 |
| Cow position: | chr27:23472103-23472428 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 180-490 |
| Cow position: | chr27:27632753-27632437 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 183-422 |
| Cow position: | chr27:22386723-22386974 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 183-445 |
| Cow position: | chr27:22569633-22569897 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 183-463 |
| Cow position: | chr27:1122880-1123180 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 183-490 |
| Cow position: | chr27:22547547-22547232 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 184-412 |
| Cow position: | chr27:20092985-20092744 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 184-470 |
| Cow position: | chr27:14343600-14343315 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 184-471 |
| Cow position: | chr27:30890144-30890444 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 184-473 |
| Cow position: | chr27:23890787-23891093 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 131 |
| Conread position: | 184-477 |
| Cow position: | chr27:8353328-8353636 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 184-490 |
| Cow position: | chr27:28206651-28206970 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 185-440 |
| Cow position: | chr27:435075-435354 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 186-432 |
| Cow position: | chr27:21213639-21213885 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 186-490 |
| Cow position: | chr27:26150869-26151192 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 261 |
| Conread position: | 187-480 |
| Cow position: | chr27:20553584-20553879 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 188-490 |
| Cow position: | chr27:24014886-24014568 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 46, 146 |
| Conread position: | 188-517 |
| Cow position: | chr27:28496517-28496174 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 105, 129 |
| Conread position: | 190-493 |
| Cow position: | chr27:26433951-26433636 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 191-490 |
| Cow position: | chr27:26428276-26427956 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 195-432 |
| Cow position: | chr27:16625761-16626010 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 198-480 |
| Cow position: | chr27:4806038-4805745 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 209-473 |
| Cow position: | chr27:27613746-27613483 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 213-424 |
| Cow position: | chr27:4858761-4858540 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 237-458 |
| Cow position: | chr27:20789475-20789239 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 57, 217 |
| Conread position: | 237-490 |
| Cow position: | chr27:3801-4060 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 237-490 |
| Cow position: | chr27:11815843-11815587 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 237-490 |
| Cow position: | chr27:28018242-28018509 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 114 |
| Conread position: | 267-482 |
| Cow position: | chr27:27528421-27528197 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 269-490 |
| Cow position: | chr27:28061825-28061592 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 308-490 |
| Cow position: | chr27:17926646-17926464 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 309-488 |
| Cow position: | chr27:1884023-1884207 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 343-490 |
| Cow position: | chr27:20592003-20592156 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 350-482 |
| Cow position: | chr27:26322381-26322518 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 351-482 |
| Cow position: | chr27:6674268-6674405 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 353-490 |
| Cow position: | chr27:16620021-16620164 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.