Cow genome map

Conread name: Ova1-OVRM10016H10

Conread position: 144-302
Cow position: chr28:7557579-7557742 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 144-407
Cow position: chr28:2524094-2523828 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 144-434
Cow position: chr28:24082421-24082116 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 90, 31

Conread position: 144-490
Cow position: chr28:4938952-4938628 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 29

Conread position: 144-490
Cow position: chr28:5204345-5203989 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 144-490
Cow position: chr28:10977991-10977654 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 147-490
Cow position: chr28:19222003-19222356 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 31

Conread position: 150-488
Cow position: chr28:2899135-2898787 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 198

Conread position: 151-490
Cow position: chr28:33052181-33051810 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 43

Conread position: 154-322
Cow position: chr28:4051340-4051171 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 158

Conread position: 154-326
Cow position: chr28:22147874-22148048 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 24

Conread position: 154-338
Cow position: chr28:7498005-7498192 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 167

Conread position: 154-364
Cow position: chr28:26743764-26743556 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 18

Conread position: 154-450
Cow position: chr28:2752352-2752666 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 166

Conread position: 154-482
Cow position: chr28:26220398-26220059 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 71

Conread position: 154-490
Cow position: chr28:5144381-5144733 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 17

Conread position: 154-490
Cow position: chr28:6059330-6059683 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 80, 22

Conread position: 154-490
Cow position: chr28:8021960-8022321 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 154-490
Cow position: chr28:12964711-12964367 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 91

Conread position: 154-490
Cow position: chr28:16110079-16109734 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 191

Conread position: 155-458
Cow position: chr28:2960690-2961010 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 86, 23

Conread position: 155-490
Cow position: chr28:8408877-8408529 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 161

Conread position: 156-490
Cow position: chr28:34133996-34133653 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 16

Conread position: 157-363
Cow position: chr28:11079438-11079239 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 7

Conread position: 157-363
Cow position: chr28:32174766-32174562 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 76, 16

Conread position: 159-288
Cow position: chr28:10212290-10212421 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 159-305
Cow position: chr28:3397067-3397209 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 135, 19

Conread position: 159-314
Cow position: chr28:8149495-8149653 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 159-353
Cow position: chr28:26531142-26531339 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 43

Conread position: 159-360
Cow position: chr28:7350791-7350593 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 74, 146

Conread position: 159-361
Cow position: chr28:777812-777602 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 16

Conread position: 159-362
Cow position: chr28:4013221-4013020 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 83, 165

Conread position: 159-458
Cow position: chr28:2131787-2132101 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 156

Conread position: 159-482
Cow position: chr28:4089921-4090247 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 57

Conread position: 159-488
Cow position: chr28:16386381-16386714 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 290

Conread position: 159-489
Cow position: chr28:4884115-4884476 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 135

Conread position: 159-490
Cow position: chr28:8787677-8787336 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 142

Conread position: 159-490
Cow position: chr28:11422677-11423014 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 159-490
Cow position: chr28:12951554-12951222 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 83

Conread position: 159-490
Cow position: chr28:14649482-14649138 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 26, 99

Conread position: 159-490
Cow position: chr28:16210963-16211307 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 159-490
Cow position: chr28:16369946-16370285 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 280

Conread position: 159-490
Cow position: chr28:20124920-20124575 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 159-490
Cow position: chr28:20313414-20313065 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 155

Conread position: 159-490
Cow position: chr28:21868595-21868241 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 175

Conread position: 159-490
Cow position: chr28:31841209-31841550 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 46

Conread position: 159-503
Cow position: chr28:14998205-14997839 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 39

Conread position: 160-361
Cow position: chr28:27161191-27161393 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 158

Conread position: 160-453
Cow position: chr28:11828826-11829111 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 96

Conread position: 160-482
Cow position: chr28:34230364-34230027 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 203

Conread position: 160-490
Cow position: chr28:6971214-6971550 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 160-490
Cow position: chr28:29434290-29434635 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 157

Conread position: 161-326
Cow position: chr28:5255009-5254842 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 157

Conread position: 161-363
Cow position: chr28:5138861-5139064 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 73, 43

Conread position: 161-487
Cow position: chr28:5817978-5817639 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 273

Conread position: 161-490
Cow position: chr28:9636324-9636667 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 14

Conread position: 161-490
Cow position: chr28:16346398-16346737 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 33

Conread position: 161-490
Cow position: chr28:29199865-29199516 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 192

Conread position: 161-504
Cow position: chr28:5684838-5684483 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 38

Conread position: 161-562
Cow position: chr28:12430739-12430330 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 73, 37

Conread position: 162-308
Cow position: chr28:29850681-29850830 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 162-463
Cow position: chr28:6091497-6091176 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 123

Conread position: 162-490
Cow position: chr28:11884387-11884733 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 145

Conread position: 162-515
Cow position: chr28:29988977-29989348 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 32

Conread position: 163-314
Cow position: chr28:8304380-8304226 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 95

Conread position: 165-289
Cow position: chr28:9109347-9109221 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 34

Conread position: 165-302
Cow position: chr28:8396468-8396326 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 165-317
Cow position: chr28:9705781-9705629 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 89

Conread position: 165-318
Cow position: chr28:7131955-7132111 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 93

Conread position: 165-324
Cow position: chr28:12991273-12991105 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 165-325
Cow position: chr28:6975372-6975209 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 65

Conread position: 165-358
Cow position: chr28:7619019-7619215 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 0

Conread position: 165-437
Cow position: chr28:7927307-7927043 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 67

Conread position: 165-463
Cow position: chr28:30937540-30937850 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 52

Conread position: 165-464
Cow position: chr28:9684202-9684505 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 165-488
Cow position: chr28:25596759-25596424 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 91

Conread position: 165-490
Cow position: chr28:9285246-9285588 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 77

Conread position: 165-490
Cow position: chr28:10172286-10172624 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 73, 149

Conread position: 165-490
Cow position: chr28:11426412-11426756 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 25

Conread position: 165-490
Cow position: chr28:22371536-22371889 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 302

Conread position: 165-490
Cow position: chr28:30326963-30327292 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 11

Conread position: 166-321
Cow position: chr28:10775580-10775740 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 156

Conread position: 166-363
Cow position: chr28:26982608-26982804 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 142

Conread position: 166-477
Cow position: chr28:4159085-4158754 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 167

Conread position: 166-490
Cow position: chr28:3023784-3024122 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 40

Conread position: 166-490
Cow position: chr28:22346156-22345809 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 340

Conread position: 166-490
Cow position: chr28:25057092-25056762 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 43

Conread position: 168-296
Cow position: chr28:27429159-27429028 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 168-361
Cow position: chr28:25129013-25128818 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 66, 26

Conread position: 168-363
Cow position: chr28:32358235-32358052 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 112

Conread position: 168-475
Cow position: chr28:4834717-4835041 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 54

Conread position: 168-490
Cow position: chr28:26922239-26922575 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 7, 148

Conread position: 173-366
Cow position: chr28:16245942-16246141 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 81

Conread position: 173-374
Cow position: chr28:3275614-3275410 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 62

Conread position: 173-425
Cow position: chr28:10863669-10863927 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 60, 98

Conread position: 173-490
Cow position: chr28:3492661-3492995 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 100

Conread position: 173-490
Cow position: chr28:16919046-16919372 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 67, 72

Conread position: 173-490
Cow position: chr28:21845080-21844745 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 174-297
Cow position: chr28:30902248-30902122 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 174-318
Cow position: chr28:11987293-11987149 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 56

Conread position: 174-318
Cow position: chr28:12055531-12055387 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 56

Conread position: 174-334
Cow position: chr28:17948991-17949154 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 174-350
Cow position: chr28:4438834-4438655 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 151

Conread position: 174-358
Cow position: chr28:3445358-3445545 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 54

Conread position: 174-363
Cow position: chr28:10588900-10589091 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 35

Conread position: 174-445
Cow position: chr28:33884523-33884246 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 48

Conread position: 174-450
Cow position: chr28:4016653-4016368 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 145

Conread position: 174-473
Cow position: chr28:4881118-4881439 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 174-489
Cow position: chr28:7267824-7268145 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 56

Conread position: 174-490
Cow position: chr28:3914839-3914499 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 174-490
Cow position: chr28:4071088-4070758 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 47

Conread position: 175-362
Cow position: chr28:5577650-5577459 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 152

Conread position: 175-363
Cow position: chr28:4179672-4179486 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 55

Conread position: 175-490
Cow position: chr28:33163343-33163678 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 85

Conread position: 177-363
Cow position: chr28:3740995-3740813 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 142

Conread position: 177-363
Cow position: chr28:12070350-12070168 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 99

Conread position: 177-469
Cow position: chr28:24966506-24966202 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 110

Conread position: 177-490
Cow position: chr28:3408100-3408428 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 177-490
Cow position: chr28:3746321-3745991 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 62, 147

Conread position: 177-490
Cow position: chr28:14235071-14234762 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 49

Conread position: 178-298
Cow position: chr28:16879691-16879568 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 178-361
Cow position: chr28:4182119-4181938 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 136

Conread position: 178-412
Cow position: chr28:22332646-22332403 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 127

Conread position: 178-434
Cow position: chr28:24018103-24017843 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 140

Conread position: 178-482
Cow position: chr28:7865447-7865121 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 143

Conread position: 178-489
Cow position: chr28:5436971-5437301 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 42

Conread position: 178-490
Cow position: chr28:11585084-11585418 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 178-490
Cow position: chr28:11752021-11752355 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 178-490
Cow position: chr28:12619692-12619352 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 40

Conread position: 178-490
Cow position: chr28:28164202-28163881 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 123, 16

Conread position: 179-329
Cow position: chr28:11816549-11816703 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 179-469
Cow position: chr28:23724342-23724646 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 174

Conread position: 179-490
Cow position: chr28:13474417-13474095 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 180-347
Cow position: chr28:2762311-2762142 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 139

Conread position: 180-473
Cow position: chr28:32735206-32734899 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 151

Conread position: 181-490
Cow position: chr28:22500385-22500693 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 46

Conread position: 182-298
Cow position: chr28:25675391-25675510 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 182-490
Cow position: chr28:2862982-2862651 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 162

Conread position: 183-338
Cow position: chr28:10964532-10964379 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 79

Conread position: 183-364
Cow position: chr28:3410871-3411060 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 183-436
Cow position: chr28:25806688-25806415 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 142

Conread position: 183-459
Cow position: chr28:16841655-16841925 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 35

Conread position: 183-463
Cow position: chr28:26614986-26614703 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 162

Conread position: 183-475
Cow position: chr28:3169076-3169386 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 101

Conread position: 183-480
Cow position: chr28:18591383-18591069 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 50, 82

Conread position: 183-490
Cow position: chr28:11527146-11527466 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 44, 63

Conread position: 183-490
Cow position: chr28:16204222-16204543 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 16

Conread position: 183-490
Cow position: chr28:34561456-34561148 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 72

Conread position: 184-294
Cow position: chr28:4876554-4876443 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 67

Conread position: 184-363
Cow position: chr28:32365955-32365775 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 10

Conread position: 184-473
Cow position: chr28:15043750-15044052 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 67

Conread position: 186-363
Cow position: chr28:22813368-22813193 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 70

Conread position: 186-473
Cow position: chr28:5128618-5128923 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 186-490
Cow position: chr28:1099554-1099852 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 55, 87

Conread position: 186-490
Cow position: chr28:13176579-13176889 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 70

Conread position: 186-492
Cow position: chr28:29416607-29416929 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 190-438
Cow position: chr28:2873025-2872760 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 52, 262

Conread position: 190-490
Cow position: chr28:7228284-7228596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 11

Conread position: 191-461
Cow position: chr28:20409492-20409211 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 69

Conread position: 191-490
Cow position: chr28:11786612-11786919 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 137

Conread position: 192-485
Cow position: chr28:4809883-4809587 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 42, 138

Conread position: 198-423
Cow position: chr28:18186654-18186411 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 28

Conread position: 208-490
Cow position: chr28:13267877-13267571 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 56

Conread position: 215-490
Cow position: chr28:21672874-21672588 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 55

Conread position: 237-451
Cow position: chr28:4440353-4440133 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 214

Conread position: 237-489
Cow position: chr28:2737749-2738021 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 80

Conread position: 237-489
Cow position: chr28:7751244-7751510 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 237-490
Cow position: chr28:7549001-7549273 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 85

Conread position: 237-502
Cow position: chr28:3256855-3256571 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 89

Conread position: 239-463
Cow position: chr28:3000553-3000778 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 108

Conread position: 240-482
Cow position: chr28:10533881-10534133 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 51

Conread position: 242-434
Cow position: chr28:7808711-7808520 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 19

Conread position: 244-469
Cow position: chr28:22279150-22279383 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 179

Conread position: 251-490
Cow position: chr28:23776090-23775835 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 85

Conread position: 266-490
Cow position: chr28:15063311-15063550 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 62

Conread position: 276-490
Cow position: chr28:3751332-3751108 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 27

Conread position: 276-490
Cow position: chr28:7980399-7980629 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 276-490
Cow position: chr28:24646557-24646330 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 292-489
Cow position: chr28:5366146-5366340 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 24

Conread position: 292-490
Cow position: chr28:2905576-2905370 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 43

Conread position: 344-490
Cow position: chr28:3143955-3144102 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 9

Conread position: 345-490
Cow position: chr28:5658489-5658343 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 36

Conread position: 345-490
Cow position: chr28:9390427-9390575 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 46

Conread position: 352-490
Cow position: chr28:3077919-3077782 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 67

Conread position: 353-490
Cow position: chr28:2279737-2279875 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 355-490
Cow position: chr28:8348723-8348863 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 68

Conread position: 386-488
Cow position: chr28:8628883-8628985 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.