Cow genome map
| Conread name: | Ova1-OVRM10016H10 |
| Conread position: | 123-461 |
| Cow position: | chr29:39329435-39329786 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 216 |
| Conread position: | 135-489 |
| Cow position: | chr29:7966399-7966030 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 142-450 |
| Cow position: | chr29:43099598-43099918 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 144-322 |
| Cow position: | chr29:26540395-26540576 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 144-361 |
| Cow position: | chr29:21666231-21666015 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 144-362 |
| Cow position: | chr29:20770487-20770270 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 144-363 |
| Cow position: | chr29:1007963-1007742 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 147-363 |
| Cow position: | chr29:847500-847715 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 153-364 |
| Cow position: | chr29:32799575-32799783 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 153-489 |
| Cow position: | chr29:36531000-36530647 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 154-280 |
| Cow position: | chr29:17022285-17022157 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 154-323 |
| Cow position: | chr29:22734972-22735142 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 154-346 |
| Cow position: | chr29:30681578-30681769 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 154-348 |
| Cow position: | chr29:21285494-21285300 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 169 |
| Conread position: | 154-354 |
| Cow position: | chr29:40874143-40873943 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 154-361 |
| Cow position: | chr29:26559111-26559314 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 154-362 |
| Cow position: | chr29:29324291-29324487 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 154-428 |
| Cow position: | chr29:29314525-29314810 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 154-470 |
| Cow position: | chr29:749772-750105 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 154-482 |
| Cow position: | chr29:45005494-45005828 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 124 |
| Conread position: | 154-488 |
| Cow position: | chr29:5892980-5892631 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 266 |
| Conread position: | 154-490 |
| Cow position: | chr29:8926326-8926676 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 154-490 |
| Cow position: | chr29:18085709-18085373 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 215 |
| Conread position: | 154-502 |
| Cow position: | chr29:40298885-40299243 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 161 |
| Conread position: | 155-328 |
| Cow position: | chr29:30918679-30918507 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 157-363 |
| Cow position: | chr29:34745527-34745735 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 157-474 |
| Cow position: | chr29:11434251-11433921 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 158-490 |
| Cow position: | chr29:9709827-9709481 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 159-297 |
| Cow position: | chr29:19363840-19363701 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 91 |
| Conread position: | 159-327 |
| Cow position: | chr29:39038137-39038310 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 159-355 |
| Cow position: | chr29:44139113-44139312 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 159-360 |
| Cow position: | chr29:30548906-30548702 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 159-363 |
| Cow position: | chr29:28840284-28840079 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 159-407 |
| Cow position: | chr29:34358848-34359114 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 81, 156 |
| Conread position: | 159-440 |
| Cow position: | chr29:23243748-23244047 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 174 |
| Conread position: | 159-460 |
| Cow position: | chr29:25092236-25091921 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 75, 104 |
| Conread position: | 159-463 |
| Cow position: | chr29:32210941-32211250 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 159-469 |
| Cow position: | chr29:19125452-19125147 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 159-473 |
| Cow position: | chr29:22613555-22613227 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 159-481 |
| Cow position: | chr29:26653915-26654249 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 159-488 |
| Cow position: | chr29:42363887-42364232 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 159-489 |
| Cow position: | chr29:12680284-12679938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 159-490 |
| Cow position: | chr29:1557061-1556715 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 164 |
| Conread position: | 159-490 |
| Cow position: | chr29:6636208-6635887 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 159-490 |
| Cow position: | chr29:17110087-17109754 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 159-490 |
| Cow position: | chr29:19949437-19949092 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 159-490 |
| Cow position: | chr29:29769224-29769563 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 159-490 |
| Cow position: | chr29:31929117-31928762 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 160-283 |
| Cow position: | chr29:25288800-25288919 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 160-355 |
| Cow position: | chr29:23825085-23825287 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 160-363 |
| Cow position: | chr29:41530978-41530773 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 160-477 |
| Cow position: | chr29:36210266-36209960 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 192, 10 |
| Conread position: | 160-481 |
| Cow position: | chr29:21932988-21933321 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 161-309 |
| Cow position: | chr29:7290904-7290753 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 161-331 |
| Cow position: | chr29:4070752-4070583 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 161-489 |
| Cow position: | chr29:40853056-40852716 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 162-490 |
| Cow position: | chr29:13639239-13639584 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 291 |
| Conread position: | 163-345 |
| Cow position: | chr29:22166955-22167138 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 165-291 |
| Cow position: | chr29:15798076-15797948 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 165-361 |
| Cow position: | chr29:36952180-36952372 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 13 |
| Conread position: | 165-457 |
| Cow position: | chr29:41112757-41113045 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 165-490 |
| Cow position: | chr29:26779006-26778667 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 166-310 |
| Cow position: | chr29:22723724-22723577 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 166-355 |
| Cow position: | chr29:32176795-32176613 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 166-356 |
| Cow position: | chr29:38978656-38978462 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 166-490 |
| Cow position: | chr29:34744506-34744834 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 166-501 |
| Cow position: | chr29:19762391-19762045 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 167-363 |
| Cow position: | chr29:1615051-1614851 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 168-433 |
| Cow position: | chr29:10156185-10156462 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 168-450 |
| Cow position: | chr29:27589044-27588748 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 277 |
| Conread position: | 170-490 |
| Cow position: | chr29:20903171-20903505 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 70, 119 |
| Conread position: | 170-490 |
| Cow position: | chr29:36217231-36216900 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 173-318 |
| Cow position: | chr29:17804650-17804503 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 173-363 |
| Cow position: | chr29:7624294-7624100 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 182 |
| Conread position: | 173-413 |
| Cow position: | chr29:4003008-4002756 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 173-448 |
| Cow position: | chr29:10058422-10058712 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 173-490 |
| Cow position: | chr29:35501539-35501866 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 174-349 |
| Cow position: | chr29:43441377-43441555 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 93 |
| Conread position: | 174-363 |
| Cow position: | chr29:13028555-13028363 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 174-363 |
| Cow position: | chr29:17154893-17154693 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 174-477 |
| Cow position: | chr29:22175796-22175486 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 176 |
| Conread position: | 174-487 |
| Cow position: | chr29:19756544-19756234 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 174-490 |
| Cow position: | chr29:4480058-4480393 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 174-490 |
| Cow position: | chr29:22162134-22162468 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 279 |
| Conread position: | 174-490 |
| Cow position: | chr29:24624364-24624030 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 174-490 |
| Cow position: | chr29:40117686-40117351 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 65, 155 |
| Conread position: | 175-490 |
| Cow position: | chr29:11705226-11704905 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 68 |
| Conread position: | 175-490 |
| Cow position: | chr29:34773622-34773945 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 174 |
| Conread position: | 177-360 |
| Cow position: | chr29:4874768-4874959 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 177-473 |
| Cow position: | chr29:10839053-10838750 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 177-489 |
| Cow position: | chr29:1325551-1325221 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 177-490 |
| Cow position: | chr29:41811478-41811795 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 178-361 |
| Cow position: | chr29:23825784-23825596 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 149 |
| Conread position: | 178-363 |
| Cow position: | chr29:12625865-12626053 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 178-363 |
| Cow position: | chr29:29176506-29176689 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 82 |
| Conread position: | 178-366 |
| Cow position: | chr29:742538-742719 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 178-370 |
| Cow position: | chr29:23220390-23220583 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 178-445 |
| Cow position: | chr29:22028844-22029112 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 178-462 |
| Cow position: | chr29:11647205-11646914 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 250 |
| Conread position: | 178-482 |
| Cow position: | chr29:17607527-17607207 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 178-489 |
| Cow position: | chr29:109794-109493 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 178-489 |
| Cow position: | chr29:16195951-16195636 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 90 |
| Conread position: | 178-490 |
| Cow position: | chr29:356432-356109 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 141 |
| Conread position: | 178-490 |
| Cow position: | chr29:1933460-1933774 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 178-502 |
| Cow position: | chr29:86901-87251 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 178-503 |
| Cow position: | chr29:39111204-39111539 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 179-318 |
| Cow position: | chr29:32197807-32197665 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 179-438 |
| Cow position: | chr29:26416460-26416195 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 7 |
| Conread position: | 179-464 |
| Cow position: | chr29:5186383-5186690 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 55, 219 |
| Conread position: | 179-490 |
| Cow position: | chr29:28196899-28197225 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 180-490 |
| Cow position: | chr29:25737305-25737633 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 273 |
| Conread position: | 180-491 |
| Cow position: | chr29:463543-463872 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 181-420 |
| Cow position: | chr29:27330000-27329746 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 182-363 |
| Cow position: | chr29:18012665-18012480 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 183-472 |
| Cow position: | chr29:10818344-10818636 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 183-504 |
| Cow position: | chr29:23155332-23155018 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 184-318 |
| Cow position: | chr29:22032535-22032673 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 184-410 |
| Cow position: | chr29:31943973-31943743 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 184-440 |
| Cow position: | chr29:26275711-26275450 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 184-490 |
| Cow position: | chr29:26615612-26615942 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 184-496 |
| Cow position: | chr29:28446151-28446483 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 186-360 |
| Cow position: | chr29:5063248-5063076 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 187-446 |
| Cow position: | chr29:27826622-27826352 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 187-482 |
| Cow position: | chr29:24578965-24578670 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 188 |
| Conread position: | 187-490 |
| Cow position: | chr29:43328746-43328421 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 188-490 |
| Cow position: | chr29:5098665-5098979 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 239 |
| Conread position: | 192-490 |
| Cow position: | chr29:4520433-4520118 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 192-490 |
| Cow position: | chr29:23983858-23984180 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 207-490 |
| Cow position: | chr29:29975119-29974824 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 208-486 |
| Cow position: | chr29:44682023-44682304 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 211-490 |
| Cow position: | chr29:17034-17322 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 211-490 |
| Cow position: | chr29:22714645-22714945 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 214-488 |
| Cow position: | chr29:24103466-24103764 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 214-490 |
| Cow position: | chr29:40166319-40166025 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 258 |
| Conread position: | 236-362 |
| Cow position: | chr29:33551512-33551639 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 236-445 |
| Cow position: | chr29:28587503-28587285 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 237-349 |
| Cow position: | chr29:31477063-31477177 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 237-482 |
| Cow position: | chr29:11135846-11136098 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 237-490 |
| Cow position: | chr29:2744217-2744489 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 238-438 |
| Cow position: | chr29:31674682-31674465 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 247-489 |
| Cow position: | chr29:31594087-31594331 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 247-490 |
| Cow position: | chr29:6774957-6775202 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 255-490 |
| Cow position: | chr29:2623447-2623697 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 270-482 |
| Cow position: | chr29:4328435-4328224 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 295-473 |
| Cow position: | chr29:7040851-7041039 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 342-490 |
| Cow position: | chr29:4066020-4065870 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 347-490 |
| Cow position: | chr29:13458980-13458841 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 353-490 |
| Cow position: | chr29:9686080-9686218 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 354-490 |
| Cow position: | chr29:686265-686409 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 358-490 |
| Cow position: | chr29:40902803-40902937 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 374-490 |
| Cow position: | chr29:21665869-21665753 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-469 |
| Cow position: | chr29:34430382-34430288 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.