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Cow genome map

           
Conread name:
           
Ova1-OVRM10018H10
        

               
Conread position:
               
1-274
               

               
Cow position:
               
chr20:11043166-11043437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
15-261
               

               
Cow position:
               
chr20:8021415-8021174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr20:1139491-1139743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr20:16977567-16977772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
27-253
               

               
Cow position:
               
chr20:2823138-2822926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
27-295
               

               
Cow position:
               
chr20:4755567-4755819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 40
               

               
Conread position:
               
28-269
               

               
Cow position:
               
chr20:27315246-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr20:31078051-31077821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
227, 38
               

               
Conread position:
               
31-299
               

               
Cow position:
               
chr20:7709487-7709770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr20:19328656-19328423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
37-264
               

               
Cow position:
               
chr20:11920478-11920685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
37-277
               

               
Cow position:
               
chr20:29990192-29990415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr20:17369988-17370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr20:30639520-30639752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
37-279
               

               
Cow position:
               
chr20:25021689-25021458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
37-279
               

               
Cow position:
               
chr20:30744463-30744691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr20:34097691-34097929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
37-287
               

               
Cow position:
               
chr20:12995737-12995983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
37-290
               

               
Cow position:
               
chr20:40158178-40157919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
37-291
               

               
Cow position:
               
chr20:36634091-36633834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
37-299
               

               
Cow position:
               
chr20:38515045-38514790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
37-302
               

               
Cow position:
               
chr20:5814823-5814571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr20:34083979-34083719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr20:15530117-15529865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
261, 31
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr20:14433163-14433422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
37-318
               

               
Cow position:
               
chr20:5950383-5950654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr20:38090172-38089943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
38-280
               

               
Cow position:
               
chr20:20739016-20739255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
38-291
               

               
Cow position:
               
chr20:35742027-35741786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
38-312
               

               
Cow position:
               
chr20:23870542-23870823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
39-224
               

               
Cow position:
               
chr20:31311787-31311595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
39-285
               

               
Cow position:
               
chr20:6054252-6054485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
39-295
               

               
Cow position:
               
chr20:29845310-29845065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
39-299
               

               
Cow position:
               
chr20:17251974-17251729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
39-299
               

               
Cow position:
               
chr20:24712095-24711851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
39-301
               

               
Cow position:
               
chr20:4944995-4945243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr20:3141830-3141575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
40-294
               

               
Cow position:
               
chr20:5365182-5364945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
40-302
               

               
Cow position:
               
chr20:20984252-20983999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
43-247
               

               
Cow position:
               
chr20:14499370-14499571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
43-253
               

               
Cow position:
               
chr20:30939199-30938985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
43-258
               

               
Cow position:
               
chr20:5827214-5826990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
43-285
               

               
Cow position:
               
chr20:7416909-7417143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
43-290
               

               
Cow position:
               
chr20:21345690-21345448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
43-312
               

               
Cow position:
               
chr20:10200601-10200340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr20:38432770-38432607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
44-252
               

               
Cow position:
               
chr20:15547467-15547248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
44-260
               

               
Cow position:
               
chr20:9033966-9034167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
44-262
               

               
Cow position:
               
chr20:19201784-19201578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
44-263
               

               
Cow position:
               
chr20:28935392-28935592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
44-313
               

               
Cow position:
               
chr20:33438706-33438983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
45-290
               

               
Cow position:
               
chr20:15589314-15589060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
45-290
               

               
Cow position:
               
chr20:24902025-24902274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
45-291
               

               
Cow position:
               
chr20:14283172-14282938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
48-244
               

               
Cow position:
               
chr20:27323515-27323331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
48-257
               

               
Cow position:
               
chr20:5078525-5078323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chr20:35442036-35442237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
48-291
               

               
Cow position:
               
chr20:28594539-28594302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
48-295
               

               
Cow position:
               
chr20:39016623-39016859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
48-307
               

               
Cow position:
               
chr20:6248353-6248596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
49-188
               

               
Cow position:
               
chr20:18659076-18659217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
49-291
               

               
Cow position:
               
chr20:34202887-34202652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
49-303
               

               
Cow position:
               
chr20:7441897-7442126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
49-314
               

               
Cow position:
               
chr20:36806762-36806518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
50-232
               

               
Cow position:
               
chr20:10052987-10052811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr20:3588904-3588707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr20:297760-297938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr20:37228823-37229018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
50-253
               

               
Cow position:
               
chr20:36842831-36842632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
50-259
               

               
Cow position:
               
chr20:15847026-15846805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
50-285
               

               
Cow position:
               
chr20:580653-580896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
51-195
               

               
Cow position:
               
chr20:30203554-30203418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
51-211
               

               
Cow position:
               
chr20:4315427-4315263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
51-262
               

               
Cow position:
               
chr20:23935935-23936137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr20:9730247-9730043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chr20:21721463-21721251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr20:20099359-20099562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
167, 17
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr20:21291912-21291696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr20:12126058-12126280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
51-285
               

               
Cow position:
               
chr20:34221725-34221503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
51-287
               

               
Cow position:
               
chr20:13876466-13876680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
51-295
               

               
Cow position:
               
chr20:360934-361173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
51-295
               

               
Cow position:
               
chr20:5078879-5078642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
51-307
               

               
Cow position:
               
chr20:6890986-6890716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
52-247
               

               
Cow position:
               
chr20:9923833-9923630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chr20:24883118-24883322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr20:16941040-16941274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
52-312
               

               
Cow position:
               
chr20:21715031-21714753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
52-313
               

               
Cow position:
               
chr20:33820713-33820452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
53-285
               

               
Cow position:
               
chr20:5703713-5703495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
53-302
               

               
Cow position:
               
chr20:6372323-6372551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr20:16291932-16291712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
55-296
               

               
Cow position:
               
chr20:11008412-11008184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr20:26790362-26790534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
56-291
               

               
Cow position:
               
chr20:40303644-40303865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
56-299
               

               
Cow position:
               
chr20:20056217-20056473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
65-244
               

               
Cow position:
               
chr20:25474785-25474618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
67-284
               

               
Cow position:
               
chr20:18392028-18392240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
67-295
               

               
Cow position:
               
chr20:10772460-10772220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr20:9266871-9267095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
68-266
               

               
Cow position:
               
chr20:33076593-33076780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
69-290
               

               
Cow position:
               
chr20:23590523-23590728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
72-290
               

               
Cow position:
               
chr20:12085206-12085414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr20:38670990-38670759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
81-291
               

               
Cow position:
               
chr20:3320920-3321114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
81-302
               

               
Cow position:
               
chr20:2742922-2743128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 36
               

               
Conread position:
               
83-269
               

               
Cow position:
               
chr20:42451377-42451186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
83-285
               

               
Cow position:
               
chr20:16548062-16548254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
83-302
               

               
Cow position:
               
chr20:23064604-23064821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
83-333
               

               
Cow position:
               
chr20:206430-206671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
84-263
               

               
Cow position:
               
chr20:19826514-19826683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr20:16405829-16405589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
88-245
               

               
Cow position:
               
chr20:15515225-15515376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr20:15565609-15565826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr20:9537349-9537163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
95-283
               

               
Cow position:
               
chr20:38578549-38578734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
104-295
               

               
Cow position:
               
chr20:7756418-7756607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
104-305
               

               
Cow position:
               
chr20:13652160-13652361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr20:17846158-17845962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr20:1824428-1824611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
111-291
               

               
Cow position:
               
chr20:10245853-10246035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
111-305
               

               
Cow position:
               
chr20:14620103-14620298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
114-261
               

               
Cow position:
               
chr20:40692263-40692112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
116-282
               

               
Cow position:
               
chr20:5636674-5636508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
116-299
               

               
Cow position:
               
chr20:13983547-13983365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
119-247
               

               
Cow position:
               
chr20:41274711-41274836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
119-261
               

               
Cow position:
               
chr20:7622790-7622933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
119-285
               

               
Cow position:
               
chr20:39728640-39728474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr20:11444265-11444104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 112
               

               
Conread position:
               
121-305
               

               
Cow position:
               
chr20:14100248-14100429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
124-268
               

               
Cow position:
               
chr20:26059044-26059190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr20:25953449-25953266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
126-336
               

               
Cow position:
               
chr20:23678531-23678742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr20:19237256-19237082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
129-263
               

               
Cow position:
               
chr20:37273177-37273044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
130-266
               

               
Cow position:
               
chr20:2148011-2148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr20:31799025-31799179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr20:40782142-40781985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr20:35365220-35365053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr20:35591469-35591643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
131-302
               

               
Cow position:
               
chr20:12534561-12534734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
131-308
               

               
Cow position:
               
chr20:21815742-21815563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr20:354722-354872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
133-285
               

               
Cow position:
               
chr20:35727751-35727906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
134-244
               

               
Cow position:
               
chr20:6849070-6848960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
134-246
               

               
Cow position:
               
chr20:17544802-17544687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
134-271
               

               
Cow position:
               
chr20:7155354-7155219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
134-290
               

               
Cow position:
               
chr20:20898414-20898571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
134-291
               

               
Cow position:
               
chr20:22959170-22959328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
134-292
               

               
Cow position:
               
chr20:17388708-17388546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
134-296
               

               
Cow position:
               
chr20:21372482-21372317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr20:14980332-14980498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
135-264
               

               
Cow position:
               
chr20:24002778-24002646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
135-290
               

               
Cow position:
               
chr20:16492250-16492091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
135-305
               

               
Cow position:
               
chr20:11135576-11135757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
137-300
               

               
Cow position:
               
chr20:39415923-39415759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
138-260
               

               
Cow position:
               
chr20:11499178-11499061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
138-264
               

               
Cow position:
               
chr20:31845113-31845240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
138-284
               

               
Cow position:
               
chr20:14490418-14490275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
138-285
               

               
Cow position:
               
chr20:20934559-20934708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
138-285
               

               
Cow position:
               
chr20:20967495-20967345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
138-290
               

               
Cow position:
               
chr20:747114-746963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
138-294
               

               
Cow position:
               
chr20:11359459-11359618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
138-299
               

               
Cow position:
               
chr20:12581781-12581944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
138-302
               

               
Cow position:
               
chr20:15568779-15568944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr20:20158306-20158139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chr20:22485031-22484864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chr20:33067184-33067358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
138-313
               

               
Cow position:
               
chr20:34108276-34108108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
139-290
               

               
Cow position:
               
chr20:10818070-10818221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
139-312
               

               
Cow position:
               
chr20:19751476-19751305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
140-253
               

               
Cow position:
               
chr20:18396093-18395981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
140-267
               

               
Cow position:
               
chr20:2316255-2316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
140-313
               

               
Cow position:
               
chr20:41471271-41471096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr20:42458687-42458845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
142-252
               

               
Cow position:
               
chr20:13617394-13617283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
142-263
               

               
Cow position:
               
chr20:3359165-3359286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
142-285
               

               
Cow position:
               
chr20:29805493-29805634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
142-296
               

               
Cow position:
               
chr20:14917453-14917298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
142-300
               

               
Cow position:
               
chr20:4334363-4334521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
142-300
               

               
Cow position:
               
chr20:34777348-34777189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
142-302
               

               
Cow position:
               
chr20:11038746-11038591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
143-285
               

               
Cow position:
               
chr20:37919199-37919346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
146-303
               

               
Cow position:
               
chr20:39962739-39962575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
148-303
               

               
Cow position:
               
chr20:40127183-40127336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
151-268
               

               
Cow position:
               
chr20:16496812-16496931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
151-299
               

               
Cow position:
               
chr20:35146180-35146033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
152-308
               

               
Cow position:
               
chr20:6096336-6096494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
156-288
               

               
Cow position:
               
chr20:23541006-23541136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
156-296
               

               
Cow position:
               
chr20:31323941-31323801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
156-302
               

               
Cow position:
               
chr20:9433741-9433595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
159-299
               

               
Cow position:
               
chr20:21929056-21928917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
161-285
               

               
Cow position:
               
chr20:36040624-36040498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
162-302
               

               
Cow position:
               
chr20:14759517-14759658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
165-274
               

               
Cow position:
               
chr20:11866013-11866121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
166-264
               

               
Cow position:
               
chr20:15488850-15488751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
167-312
               

               
Cow position:
               
chr20:23506326-23506472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
172-307
               

               
Cow position:
               
chr20:17765194-17765327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 5
               
Show alignments to all cow chromosomes.