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Cow genome map

           
Conread name:
           
Ova1-OVRM10019D12
        

               
Conread position:
               
482-778
               

               
Cow position:
               
chr17:20884823-20884524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
487-778
               

               
Cow position:
               
chr17:21972841-21973131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
489-778
               

               
Cow position:
               
chr17:24168886-24168604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
490-762
               

               
Cow position:
               
chr17:20904816-20905084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
490-765
               

               
Cow position:
               
chr17:11840001-11839727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
229, 31
               

               
Conread position:
               
491-677
               

               
Cow position:
               
chr17:35935439-35935259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
493-764
               

               
Cow position:
               
chr17:12109086-12108817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
495-616
               

               
Cow position:
               
chr17:11387239-11387121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
495-691
               

               
Cow position:
               
chr17:14668783-14668588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
495-764
               

               
Cow position:
               
chr17:4786200-4786484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
496-688
               

               
Cow position:
               
chr17:6135540-6135349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
496-700
               

               
Cow position:
               
chr17:20855800-20855596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
496-746
               

               
Cow position:
               
chr17:39410192-39410435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
496-755
               

               
Cow position:
               
chr17:20929522-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr17:11381448-11381716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
496-764
               

               
Cow position:
               
chr17:32027166-32027440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
496-768
               

               
Cow position:
               
chr17:43717057-43717318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
497-693
               

               
Cow position:
               
chr17:20130119-20129935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
497-693
               

               
Cow position:
               
chr17:35995438-35995629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
497-730
               

               
Cow position:
               
chr17:7732840-7733071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
497-760
               

               
Cow position:
               
chr17:15684775-15684526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
214, 23
               

               
Conread position:
               
497-761
               

               
Cow position:
               
chr17:21718719-21718980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
497-764
               

               
Cow position:
               
chr17:5012118-5011851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
214, 238
               

               
Conread position:
               
497-764
               

               
Cow position:
               
chr17:13922755-13922494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
497-767
               

               
Cow position:
               
chr17:25800606-25800872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
498-678
               

               
Cow position:
               
chr17:7659318-7659505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
498-726
               

               
Cow position:
               
chr17:14882736-14882959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
498-734
               

               
Cow position:
               
chr17:25702879-25702642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
498-762
               

               
Cow position:
               
chr17:42150665-42150406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
498-764
               

               
Cow position:
               
chr17:26101869-26102128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
498-765
               

               
Cow position:
               
chr17:45135637-45135894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
498-766
               

               
Cow position:
               
chr17:34821192-34820918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
498-771
               

               
Cow position:
               
chr17:15303695-15303970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
499-700
               

               
Cow position:
               
chr17:24987475-24987283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
499-744
               

               
Cow position:
               
chr17:23063992-23063753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
499-763
               

               
Cow position:
               
chr17:1463052-1463316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 251
               

               
Conread position:
               
499-766
               

               
Cow position:
               
chr17:27795929-27795658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
500-731
               

               
Cow position:
               
chr17:4685835-4685605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
500-731
               

               
Cow position:
               
chr17:19899176-19898936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
500-734
               

               
Cow position:
               
chr17:20306609-20306369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 197
               

               
Conread position:
               
500-766
               

               
Cow position:
               
chr17:6156302-6156041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
252, 15
               

               
Conread position:
               
500-772
               

               
Cow position:
               
chr17:24149459-24149188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
501-728
               

               
Cow position:
               
chr17:16438450-16438672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
501-766
               

               
Cow position:
               
chr17:29080808-29080554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
502-700
               

               
Cow position:
               
chr17:36943636-36943446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
502-735
               

               
Cow position:
               
chr17:25139549-25139305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
502-743
               

               
Cow position:
               
chr17:12346565-12346805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
502-761
               

               
Cow position:
               
chr17:17772146-17772411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
502-764
               

               
Cow position:
               
chr17:11036184-11035925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
503-696
               

               
Cow position:
               
chr17:10478078-10477883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
503-697
               

               
Cow position:
               
chr17:43970889-43971073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr17:5344890-5344660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
503-772
               

               
Cow position:
               
chr17:7693343-7693069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
504-690
               

               
Cow position:
               
chr17:21693491-21693308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
504-690
               

               
Cow position:
               
chr17:31736236-31736419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
504-691
               

               
Cow position:
               
chr17:25352482-25352283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
504-710
               

               
Cow position:
               
chr17:31231686-31231894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
504-724
               

               
Cow position:
               
chr17:22081257-22081463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
504-741
               

               
Cow position:
               
chr17:21236790-21236562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
504-743
               

               
Cow position:
               
chr17:34772781-34772538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
504-756
               

               
Cow position:
               
chr17:18673765-18674008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 181
               

               
Conread position:
               
504-764
               

               
Cow position:
               
chr17:7601236-7600973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
504-772
               

               
Cow position:
               
chr17:18202033-18201762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
505-692
               

               
Cow position:
               
chr17:27606782-27606602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
505-705
               

               
Cow position:
               
chr17:7276548-7276352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
505-710
               

               
Cow position:
               
chr17:12963342-12963540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
505-766
               

               
Cow position:
               
chr17:11912235-11912492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
505-766
               

               
Cow position:
               
chr17:27754435-27754168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
505-767
               

               
Cow position:
               
chr17:35149258-35149517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
505-770
               

               
Cow position:
               
chr17:30665544-30665281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
506-707
               

               
Cow position:
               
chr17:40277686-40277890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr17:3387987-3387746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
194, 129
               

               
Conread position:
               
506-759
               

               
Cow position:
               
chr17:7959447-7959198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
205, 104
               

               
Conread position:
               
506-763
               

               
Cow position:
               
chr17:34860642-34860387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
506-764
               

               
Cow position:
               
chr17:38615225-38614973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
506-778
               

               
Cow position:
               
chr17:26631540-26631813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
507-693
               

               
Cow position:
               
chr17:27650762-27650573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
507-767
               

               
Cow position:
               
chr17:29995171-29995426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
508-691
               

               
Cow position:
               
chr17:34343003-34343182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
508-720
               

               
Cow position:
               
chr17:6978908-6979120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
508-734
               

               
Cow position:
               
chr17:15334227-15334448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
508-737
               

               
Cow position:
               
chr17:21076035-21075811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
508-770
               

               
Cow position:
               
chr17:11618849-11618595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
508-778
               

               
Cow position:
               
chr17:17222610-17222341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
509-631
               

               
Cow position:
               
chr17:5550863-5550744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
509-666
               

               
Cow position:
               
chr17:9929643-9929485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
509-711
               

               
Cow position:
               
chr17:33288227-33288413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
509-717
               

               
Cow position:
               
chr17:9900168-9899963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
511-759
               

               
Cow position:
               
chr17:19783316-19783076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
511-762
               

               
Cow position:
               
chr17:25513852-25514107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 239
               

               
Conread position:
               
512-707
               

               
Cow position:
               
chr17:32962400-32962596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
512-753
               

               
Cow position:
               
chr17:12959359-12959130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
512-764
               

               
Cow position:
               
chr17:21806184-21806439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
513-701
               

               
Cow position:
               
chr17:30493898-30494084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
514-762
               

               
Cow position:
               
chr17:33793413-33793181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
514-764
               

               
Cow position:
               
chr17:35193557-35193807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
515-686
               

               
Cow position:
               
chr17:10037670-10037498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
515-701
               

               
Cow position:
               
chr17:11269513-11269699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
515-711
               

               
Cow position:
               
chr17:30900574-30900376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
515-721
               

               
Cow position:
               
chr17:17163907-17163705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
515-725
               

               
Cow position:
               
chr17:42419964-42419761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
515-734
               

               
Cow position:
               
chr17:26836504-26836724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
515-764
               

               
Cow position:
               
chr17:18146449-18146198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
515-769
               

               
Cow position:
               
chr17:26072503-26072753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
515-772
               

               
Cow position:
               
chr17:16078149-16078398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
237, 12
               

               
Conread position:
               
515-778
               

               
Cow position:
               
chr17:10023321-10023052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
516-700
               

               
Cow position:
               
chr17:17265876-17266058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
172, 11
               

               
Conread position:
               
516-744
               

               
Cow position:
               
chr17:10414744-10414531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
516-760
               

               
Cow position:
               
chr17:11994762-11995014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
516-763
               

               
Cow position:
               
chr17:6270024-6269764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
516-767
               

               
Cow position:
               
chr17:25815853-25815612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
193, 142
               

               
Conread position:
               
517-674
               

               
Cow position:
               
chr17:25608260-25608417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
517-692
               

               
Cow position:
               
chr17:243379-243217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
517-733
               

               
Cow position:
               
chr17:26225287-26225071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
517-750
               

               
Cow position:
               
chr17:28465686-28465451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
517-766
               

               
Cow position:
               
chr17:15355192-15354942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
517-778
               

               
Cow position:
               
chr17:7758027-7758275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
518-735
               

               
Cow position:
               
chr17:33653434-33653648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
518-778
               

               
Cow position:
               
chr17:26802676-26802933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
519-678
               

               
Cow position:
               
chr17:952413-952250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
519-707
               

               
Cow position:
               
chr17:20359368-20359182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
519-720
               

               
Cow position:
               
chr17:8663763-8663561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
519-754
               

               
Cow position:
               
chr17:32332835-32333068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
519-764
               

               
Cow position:
               
chr17:45296656-45296428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
519-767
               

               
Cow position:
               
chr17:9824922-9824679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
520-766
               

               
Cow position:
               
chr17:24490799-24490552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
520-766
               

               
Cow position:
               
chr17:32471532-32471771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
520-770
               

               
Cow position:
               
chr17:18267515-18267268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
521-627
               

               
Cow position:
               
chr17:4986394-4986501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
521-640
               

               
Cow position:
               
chr17:20930557-20930441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
521-700
               

               
Cow position:
               
chr17:9260358-9260535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
521-703
               

               
Cow position:
               
chr17:10630727-10630909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
521-709
               

               
Cow position:
               
chr17:37973805-37973999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
521-711
               

               
Cow position:
               
chr17:7037366-7037558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
521-711
               

               
Cow position:
               
chr17:19543980-19544167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
521-711
               

               
Cow position:
               
chr17:20881565-20881743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
521-728
               

               
Cow position:
               
chr17:35043679-35043875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
521-739
               

               
Cow position:
               
chr17:15154629-15154855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
521-739
               

               
Cow position:
               
chr17:36264992-36265215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
521-743
               

               
Cow position:
               
chr17:30501560-30501781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
521-755
               

               
Cow position:
               
chr17:26757189-26757426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
521-761
               

               
Cow position:
               
chr17:4817783-4817544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
521-762
               

               
Cow position:
               
chr17:30168984-30169221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
521-763
               

               
Cow position:
               
chr17:31559825-31559583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
521-764
               

               
Cow position:
               
chr17:17193743-17193505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
78, 171
               

               
Conread position:
               
521-768
               

               
Cow position:
               
chr17:11397920-11397673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
521-770
               

               
Cow position:
               
chr17:25342487-25342736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 84
               

               
Conread position:
               
521-778
               

               
Cow position:
               
chr17:18818815-18818567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
522-617
               

               
Cow position:
               
chr17:12958157-12958254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
522-646
               

               
Cow position:
               
chr17:36460499-36460624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
522-647
               

               
Cow position:
               
chr17:34035619-34035745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-666
               

               
Cow position:
               
chr17:10461260-10461111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-685
               

               
Cow position:
               
chr17:24797739-24797910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
522-692
               

               
Cow position:
               
chr17:40718565-40718737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
522-693
               

               
Cow position:
               
chr17:34188132-34187960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-697
               

               
Cow position:
               
chr17:26880289-26880455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
522-704
               

               
Cow position:
               
chr17:5761897-5762085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
522-711
               

               
Cow position:
               
chr17:10454331-10454520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
522-711
               

               
Cow position:
               
chr17:36467936-36468125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
522-719
               

               
Cow position:
               
chr17:13976457-13976653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
522-724
               

               
Cow position:
               
chr17:24895330-24895126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
522-732
               

               
Cow position:
               
chr17:11985633-11985833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
522-734
               

               
Cow position:
               
chr17:15883927-15883714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
522-734
               

               
Cow position:
               
chr17:32220630-32220843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
144, 113
               

               
Conread position:
               
522-734
               

               
Cow position:
               
chr17:39964130-39963920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
522-735
               

               
Cow position:
               
chr17:32978685-32978892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
195, 82
               

               
Conread position:
               
522-740
               

               
Cow position:
               
chr17:5280396-5280617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 195
               

               
Conread position:
               
522-740
               

               
Cow position:
               
chr17:41616991-41616772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 199
               

               
Conread position:
               
522-741
               

               
Cow position:
               
chr17:14049950-14050171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
522-759
               

               
Cow position:
               
chr17:24877358-24877122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
522-759
               

               
Cow position:
               
chr17:40694180-40694421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
522-760
               

               
Cow position:
               
chr17:25467244-25467004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 203
               

               
Conread position:
               
522-760
               

               
Cow position:
               
chr17:37096182-37095936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
522-762
               

               
Cow position:
               
chr17:21325596-21325347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
522-762
               

               
Cow position:
               
chr17:40772081-40771851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-763
               

               
Cow position:
               
chr17:9965770-9966014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
522-763
               

               
Cow position:
               
chr17:30194018-30194251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:3883489-3883737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:5731175-5730929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:10458682-10458923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
201, 62
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:13940063-13940309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:30728760-30728518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
522-764
               

               
Cow position:
               
chr17:32418864-32419103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
522-768
               

               
Cow position:
               
chr17:10506606-10506357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
522-768
               

               
Cow position:
               
chr17:20801067-20800823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
522-768
               

               
Cow position:
               
chr17:24841951-24841704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
522-771
               

               
Cow position:
               
chr17:5898272-5898525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 246
               

               
Conread position:
               
522-771
               

               
Cow position:
               
chr17:24559545-24559296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
522-772
               

               
Cow position:
               
chr17:16371514-16371261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
522-772
               

               
Cow position:
               
chr17:18810807-18811051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
240, 189
               

               
Conread position:
               
522-775
               

               
Cow position:
               
chr17:15102636-15102892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
522-777
               

               
Cow position:
               
chr17:28982430-28982182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
522-778
               

               
Cow position:
               
chr17:16868022-16868269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
523-659
               

               
Cow position:
               
chr17:8931520-8931655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
523-670
               

               
Cow position:
               
chr17:19765772-19765920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
523-724
               

               
Cow position:
               
chr17:19471522-19471718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
523-727
               

               
Cow position:
               
chr17:15020403-15020600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
523-732
               

               
Cow position:
               
chr17:24947587-24947378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
523-752
               

               
Cow position:
               
chr17:5038804-5039022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
523-754
               

               
Cow position:
               
chr17:12248982-12249206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
215, 149
               

               
Conread position:
               
523-762
               

               
Cow position:
               
chr17:3389086-3388841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 187
               

               
Conread position:
               
523-764
               

               
Cow position:
               
chr17:11664326-11664572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
523-764
               

               
Cow position:
               
chr17:25118138-25117897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
523-764
               

               
Cow position:
               
chr17:29084420-29084187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
523-765
               

               
Cow position:
               
chr17:21744187-21743943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
523-765
               

               
Cow position:
               
chr17:36712463-36712702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 200
               

               
Conread position:
               
523-772
               

               
Cow position:
               
chr17:14652531-14652775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
523-772
               

               
Cow position:
               
chr17:15187823-15188071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
523-778
               

               
Cow position:
               
chr17:25612338-25612089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
524-701
               

               
Cow position:
               
chr17:41009522-41009348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
524-711
               

               
Cow position:
               
chr17:26183598-26183410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
524-720
               

               
Cow position:
               
chr17:18708367-18708554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
524-743
               

               
Cow position:
               
chr17:14024378-14024597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
524-748
               

               
Cow position:
               
chr17:32553800-32554018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 149
               

               
Conread position:
               
524-760
               

               
Cow position:
               
chr17:24613476-24613233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
524-760
               

               
Cow position:
               
chr17:33067317-33067545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
524-763
               

               
Cow position:
               
chr17:20032657-20032898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
524-763
               

               
Cow position:
               
chr17:25587213-25587442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
524-764
               

               
Cow position:
               
chr17:4264476-4264236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
524-764
               

               
Cow position:
               
chr17:22128176-22127935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
524-764
               

               
Cow position:
               
chr17:25709966-25709719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
524-765
               

               
Cow position:
               
chr17:20199103-20199328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
524-766
               

               
Cow position:
               
chr17:32278651-32278896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
524-766
               

               
Cow position:
               
chr17:32280921-32280676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
524-767
               

               
Cow position:
               
chr17:43957910-43957670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
524-772
               

               
Cow position:
               
chr17:7802922-7803170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
524-778
               

               
Cow position:
               
chr17:7571356-7571101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 0
               

               
Conread position:
               
524-778
               

               
Cow position:
               
chr17:36814615-36814359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
525-711
               

               
Cow position:
               
chr17:5857318-5857508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
525-728
               

               
Cow position:
               
chr17:5027220-5027411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
525-728
               

               
Cow position:
               
chr17:10016527-10016328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
525-735
               

               
Cow position:
               
chr17:18775940-18776141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
525-764
               

               
Cow position:
               
chr17:21114708-21114941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
525-767
               

               
Cow position:
               
chr17:21003582-21003816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
526-701
               

               
Cow position:
               
chr17:30108678-30108515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
527-678
               

               
Cow position:
               
chr17:30156172-30156322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
527-764
               

               
Cow position:
               
chr17:31581718-31581484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
527-766
               

               
Cow position:
               
chr17:24119844-24120082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 91
               

               
Conread position:
               
527-766
               

               
Cow position:
               
chr17:24587870-24587635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
527-768
               

               
Cow position:
               
chr17:44146726-44146965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
528-764
               

               
Cow position:
               
chr17:1063415-1063189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
529-730
               

               
Cow position:
               
chr17:12887597-12887406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
530-674
               

               
Cow position:
               
chr17:10820744-10820882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
530-696
               

               
Cow position:
               
chr17:17418721-17418553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
530-697
               

               
Cow position:
               
chr17:35922137-35921969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
530-726
               

               
Cow position:
               
chr17:10221963-10222159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
530-763
               

               
Cow position:
               
chr17:21599436-21599668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
530-764
               

               
Cow position:
               
chr17:3467995-3467766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
530-764
               

               
Cow position:
               
chr17:7590212-7590450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
530-766
               

               
Cow position:
               
chr17:36330723-36330946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
530-767
               

               
Cow position:
               
chr17:21292794-21293032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
530-778
               

               
Cow position:
               
chr17:26231209-26230953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
531-700
               

               
Cow position:
               
chr17:30359696-30359535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
531-719
               

               
Cow position:
               
chr17:1081451-1081262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
531-724
               

               
Cow position:
               
chr17:36573876-36574070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
531-725
               

               
Cow position:
               
chr17:6761611-6761796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
531-732
               

               
Cow position:
               
chr17:44798698-44798894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
531-740
               

               
Cow position:
               
chr17:27646882-27647088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
531-763
               

               
Cow position:
               
chr17:36178807-36179023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
229, 32
               

               
Conread position:
               
531-764
               

               
Cow position:
               
chr17:25126587-25126363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
531-766
               

               
Cow position:
               
chr17:21466015-21466253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
531-768
               

               
Cow position:
               
chr17:4699468-4699712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
531-771
               

               
Cow position:
               
chr17:23280614-23280848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
532-700
               

               
Cow position:
               
chr17:6767015-6767184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
532-724
               

               
Cow position:
               
chr17:11920920-11921112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
532-734
               

               
Cow position:
               
chr17:36268752-36268561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
532-763
               

               
Cow position:
               
chr17:1025592-1025812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 61
               

               
Conread position:
               
532-764
               

               
Cow position:
               
chr17:17035188-17034962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
532-764
               

               
Cow position:
               
chr17:20090387-20090624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
532-766
               

               
Cow position:
               
chr17:12946117-12946338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
532-767
               

               
Cow position:
               
chr17:35051862-35051612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
532-772
               

               
Cow position:
               
chr17:12306158-12306394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
187, 83
               

               
Conread position:
               
532-778
               

               
Cow position:
               
chr17:1466174-1466427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
532-778
               

               
Cow position:
               
chr17:18720210-18720447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
533-693
               

               
Cow position:
               
chr17:33271429-33271579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
533-729
               

               
Cow position:
               
chr17:6787181-6786984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
533-733
               

               
Cow position:
               
chr17:30513770-30513961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
189, 37
               

               
Conread position:
               
533-762
               

               
Cow position:
               
chr17:26000362-26000136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
533-764
               

               
Cow position:
               
chr17:18934497-18934273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
533-765
               

               
Cow position:
               
chr17:25473040-25473268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
533-766
               

               
Cow position:
               
chr17:26637615-26637848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 73
               

               
Conread position:
               
533-767
               

               
Cow position:
               
chr17:21039797-21039567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
533-771
               

               
Cow position:
               
chr17:12289169-12289403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
533-778
               

               
Cow position:
               
chr17:36791365-36791134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
231, 32
               

               
Conread position:
               
534-643
               

               
Cow position:
               
chr17:36615433-36615542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-646
               

               
Cow position:
               
chr17:44797919-44797807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-658
               

               
Cow position:
               
chr17:4271119-4271244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
534-663
               

               
Cow position:
               
chr17:20887265-20887133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
534-666
               

               
Cow position:
               
chr17:39253404-39253536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-672
               

               
Cow position:
               
chr17:25718383-25718247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 99
               

               
Conread position:
               
534-685
               

               
Cow position:
               
chr17:34371845-34371998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
534-691
               

               
Cow position:
               
chr17:7865065-7864910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
534-691
               

               
Cow position:
               
chr17:21677921-21678072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
534-696
               

               
Cow position:
               
chr17:26849528-26849689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
534-698
               

               
Cow position:
               
chr17:24898445-24898279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:11432754-11432588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:13297625-13297457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:15103502-15103663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:27565803-27565636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:34948877-34948711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-700
               

               
Cow position:
               
chr17:36448698-36448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-701
               

               
Cow position:
               
chr17:20847309-20847142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
534-703
               

               
Cow position:
               
chr17:5048175-5048004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
534-705
               

               
Cow position:
               
chr17:17782292-17782127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
534-706
               

               
Cow position:
               
chr17:12251977-12252149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-710
               

               
Cow position:
               
chr17:26720962-26721138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-711
               

               
Cow position:
               
chr17:20913348-20913176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
534-711
               

               
Cow position:
               
chr17:35432602-35432425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-719
               

               
Cow position:
               
chr17:21181694-21181509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-719
               

               
Cow position:
               
chr17:43323302-43323487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-728
               

               
Cow position:
               
chr17:44234485-44234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
534-730
               

               
Cow position:
               
chr17:11055927-11056114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
192, 89
               

               
Conread position:
               
534-730
               

               
Cow position:
               
chr17:28795740-28795936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-732
               

               
Cow position:
               
chr17:6268637-6268835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
165, 172
               

               
Conread position:
               
534-732
               

               
Cow position:
               
chr17:20741783-20741979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
534-733
               

               
Cow position:
               
chr17:4723339-4723540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
161, 114
               

               
Conread position:
               
534-734
               

               
Cow position:
               
chr17:21677131-21676933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
534-735
               

               
Cow position:
               
chr17:3364829-3364633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
534-735
               

               
Cow position:
               
chr17:35457578-35457774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
534-736
               

               
Cow position:
               
chr17:36522804-36523006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-744
               

               
Cow position:
               
chr17:20836330-20836124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
534-744
               

               
Cow position:
               
chr17:40412820-40412616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
534-750
               

               
Cow position:
               
chr17:13414125-13414341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-751
               

               
Cow position:
               
chr17:25128114-25128327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
534-756
               

               
Cow position:
               
chr17:27292214-27292436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-759
               

               
Cow position:
               
chr17:25189527-25189307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
534-761
               

               
Cow position:
               
chr17:5780231-5780004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr17:908979-908756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr17:25584484-25584257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr17:25875635-25875411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
534-762
               

               
Cow position:
               
chr17:33933508-33933730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
534-763
               

               
Cow position:
               
chr17:6318628-6318852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
534-763
               

               
Cow position:
               
chr17:11280850-11281088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
534-763
               

               
Cow position:
               
chr17:12325530-12325751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
534-763
               

               
Cow position:
               
chr17:27183702-27183927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:1562551-1562767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:7143097-7142874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:13243814-13244032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:15664916-15664690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:17410540-17410305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:21434488-21434713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:21863899-21863669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:21959443-21959675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:22189671-22189449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:24883330-24883558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:25886072-25885842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:26233587-26233817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:30713586-30713358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 90
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:32989714-32989490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:32993386-32993610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:37857449-37857680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:39606662-39606443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:40355501-40355271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:40383966-40384191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:40639187-40638960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
534-764
               

               
Cow position:
               
chr17:44107929-44108140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
534-765
               

               
Cow position:
               
chr17:20157848-20157619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
534-765
               

               
Cow position:
               
chr17:25725121-25724896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
534-765
               

               
Cow position:
               
chr17:31480790-31481033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:3153328-3153563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:9056459-9056686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:9509754-9509984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 38
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:9935562-9935796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:11831878-11832104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:25511483-25511257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:27058308-27058547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:27730786-27730552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
534-766
               

               
Cow position:
               
chr17:33275519-33275737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
534-767
               

               
Cow position:
               
chr17:1035354-1035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
534-768
               

               
Cow position:
               
chr17:7810506-7810746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
534-768
               

               
Cow position:
               
chr17:9854223-9853993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 171
               

               
Conread position:
               
534-768
               

               
Cow position:
               
chr17:22032448-22032691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
534-768
               

               
Cow position:
               
chr17:24974183-24973950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
534-771
               

               
Cow position:
               
chr17:20022274-20022507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
534-777
               

               
Cow position:
               
chr17:21738625-21738874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 243
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:1256258-1256500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:1469606-1469377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
239, 71
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:3202171-3202412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:8836711-8836947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:9770745-9770512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:11215653-11215888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:14004064-14003822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:16446186-16446436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
91, 131
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:20092889-20093129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:32349303-32349071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:37340791-37341039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
534-778
               

               
Cow position:
               
chr17:37523186-37522943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
535-703
               

               
Cow position:
               
chr17:26554755-26554597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
535-725
               

               
Cow position:
               
chr17:9077974-9078169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
535-728
               

               
Cow position:
               
chr17:8597870-8598061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
535-764
               

               
Cow position:
               
chr17:9950417-9950652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
536-730
               

               
Cow position:
               
chr17:10825715-10825527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
536-743
               

               
Cow position:
               
chr17:34768215-34768423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
536-764
               

               
Cow position:
               
chr17:21437075-21437306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
536-764
               

               
Cow position:
               
chr17:27440416-27440189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
536-766
               

               
Cow position:
               
chr17:21414592-21414825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
536-770
               

               
Cow position:
               
chr17:32143327-32143096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
536-772
               

               
Cow position:
               
chr17:40312938-40312712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
537-700
               

               
Cow position:
               
chr17:27163138-27162975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-730
               

               
Cow position:
               
chr17:37552787-37552980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-743
               

               
Cow position:
               
chr17:10447150-10446943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr17:29961891-29961673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr17:34650700-34650476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
537-761
               

               
Cow position:
               
chr17:36432136-36431912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-763
               

               
Cow position:
               
chr17:22056778-22057014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
537-764
               

               
Cow position:
               
chr17:5900618-5900382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
537-764
               

               
Cow position:
               
chr17:24928715-24928488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 118
               

               
Conread position:
               
537-764
               

               
Cow position:
               
chr17:38869735-38869959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
537-765
               

               
Cow position:
               
chr17:5288401-5288179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
537-765
               

               
Cow position:
               
chr17:40673610-40673382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-766
               

               
Cow position:
               
chr17:20834419-20834190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
538-658
               

               
Cow position:
               
chr17:10428318-10428198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 110
               

               
Conread position:
               
538-658
               

               
Cow position:
               
chr17:24826847-24826967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
538-700
               

               
Cow position:
               
chr17:24111367-24111525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
538-711
               

               
Cow position:
               
chr17:21363619-21363447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
538-720
               

               
Cow position:
               
chr17:42780083-42780268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
538-724
               

               
Cow position:
               
chr17:7711672-7711490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
538-728
               

               
Cow position:
               
chr17:22051355-22051541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
538-735
               

               
Cow position:
               
chr17:12215017-12215216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
538-749
               

               
Cow position:
               
chr17:946592-946385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
538-760
               

               
Cow position:
               
chr17:37815954-37816176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
538-762
               

               
Cow position:
               
chr17:20992802-20993022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 175
               

               
Conread position:
               
538-764
               

               
Cow position:
               
chr17:33164584-33164802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
538-766
               

               
Cow position:
               
chr17:40741890-40741658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
538-768
               

               
Cow position:
               
chr17:6936442-6936665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
538-768
               

               
Cow position:
               
chr17:11101582-11101793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
538-770
               

               
Cow position:
               
chr17:25901444-25901207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
538-772
               

               
Cow position:
               
chr17:26448779-26448550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
538-778
               

               
Cow position:
               
chr17:31856908-31856673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
539-711
               

               
Cow position:
               
chr17:30270302-30270473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
539-764
               

               
Cow position:
               
chr17:14033406-14033627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
539-765
               

               
Cow position:
               
chr17:29356008-29356229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
187, 64
               

               
Conread position:
               
539-771
               

               
Cow position:
               
chr17:29026310-29026075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
540-728
               

               
Cow position:
               
chr17:6317873-6318054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
540-731
               

               
Cow position:
               
chr17:25474868-25474678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
540-775
               

               
Cow position:
               
chr17:24862689-24862460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
542-679
               

               
Cow position:
               
chr17:22772890-22773029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
544-690
               

               
Cow position:
               
chr17:17822317-17822177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
544-700
               

               
Cow position:
               
chr17:28529085-28528930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
545-762
               

               
Cow position:
               
chr17:5422849-5423054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
545-764
               

               
Cow position:
               
chr17:12536245-12536452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
547-697
               

               
Cow position:
               
chr17:21910304-21910452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
547-702
               

               
Cow position:
               
chr17:38736658-38736513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
547-723
               

               
Cow position:
               
chr17:24767061-24767234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
547-735
               

               
Cow position:
               
chr17:13290946-13291131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
152, 161
               

               
Conread position:
               
547-749
               

               
Cow position:
               
chr17:23100995-23101191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
547-750
               

               
Cow position:
               
chr17:42361736-42361532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
547-763
               

               
Cow position:
               
chr17:7132197-7132426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
547-764
               

               
Cow position:
               
chr17:11224337-11224117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
547-764
               

               
Cow position:
               
chr17:26789642-26789437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
547-764
               

               
Cow position:
               
chr17:32138189-32138411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
547-771
               

               
Cow position:
               
chr17:10528503-10528722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
547-774
               

               
Cow position:
               
chr17:5514984-5514763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
547-774
               

               
Cow position:
               
chr17:8986374-8986603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
110, 160
               

               
Conread position:
               
547-778
               

               
Cow position:
               
chr17:21788417-21788660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
547-778
               

               
Cow position:
               
chr17:37699114-37699352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
548-721
               

               
Cow position:
               
chr17:8137628-8137461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
548-761
               

               
Cow position:
               
chr17:43299058-43299270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
548-764
               

               
Cow position:
               
chr17:5372306-5372515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
548-764
               

               
Cow position:
               
chr17:29245660-29245456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
548-766
               

               
Cow position:
               
chr17:6329338-6329125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
216, 60
               

               
Conread position:
               
555-700
               

               
Cow position:
               
chr17:25095705-25095558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
555-753
               

               
Cow position:
               
chr17:1634274-1634468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
555-753
               

               
Cow position:
               
chr17:21777947-21777743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
167, 117
               

               
Conread position:
               
555-757
               

               
Cow position:
               
chr17:11362395-11362205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
555-759
               

               
Cow position:
               
chr17:26459528-26459320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
555-760
               

               
Cow position:
               
chr17:36203264-36203465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
197, 93
               

               
Conread position:
               
555-763
               

               
Cow position:
               
chr17:24752102-24752305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
555-763
               

               
Cow position:
               
chr17:36864842-36864644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
555-764
               

               
Cow position:
               
chr17:5349904-5350110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
555-764
               

               
Cow position:
               
chr17:30750267-30750047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
555-765
               

               
Cow position:
               
chr17:14025688-14025899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
555-765
               

               
Cow position:
               
chr17:18419904-18419688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
555-766
               

               
Cow position:
               
chr17:10431745-10431967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
555-768
               

               
Cow position:
               
chr17:36275555-36275342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
555-770
               

               
Cow position:
               
chr17:39771621-39771399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
555-771
               

               
Cow position:
               
chr17:40852187-40851979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
555-772
               

               
Cow position:
               
chr17:20999493-20999267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
555-777
               

               
Cow position:
               
chr17:20848743-20848523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
210, 60
               

               
Conread position:
               
555-778
               

               
Cow position:
               
chr17:5012849-5013075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
555-778
               

               
Cow position:
               
chr17:6566703-6566480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
555-778
               

               
Cow position:
               
chr17:11215014-11215229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
555-778
               

               
Cow position:
               
chr17:31037157-31037378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
556-753
               

               
Cow position:
               
chr17:8823541-8823336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
557-696
               

               
Cow position:
               
chr17:19999334-19999202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
557-711
               

               
Cow position:
               
chr17:15038797-15038950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
557-749
               

               
Cow position:
               
chr17:31754555-31754749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
557-753
               

               
Cow position:
               
chr17:10873669-10873475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
557-762
               

               
Cow position:
               
chr17:6005017-6004818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
557-764
               

               
Cow position:
               
chr17:31701652-31701444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
557-765
               

               
Cow position:
               
chr17:1114115-1113900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
557-778
               

               
Cow position:
               
chr17:24582419-24582198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
558-697
               

               
Cow position:
               
chr17:27258643-27258502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
558-764
               

               
Cow position:
               
chr17:24995214-24995009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
144, 113
               

               
Conread position:
               
558-765
               

               
Cow position:
               
chr17:7137218-7136991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
558-767
               

               
Cow position:
               
chr17:1358608-1358825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
559-766
               

               
Cow position:
               
chr17:2810849-2810639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
561-763
               

               
Cow position:
               
chr17:30529337-30529531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
561-778
               

               
Cow position:
               
chr17:25594480-25594696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
562-765
               

               
Cow position:
               
chr17:34078896-34079099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
565-723
               

               
Cow position:
               
chr17:9697471-9697628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
565-763
               

               
Cow position:
               
chr17:24751126-24750927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
565-764
               

               
Cow position:
               
chr17:28284822-28285015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 59
               

               
Conread position:
               
565-772
               

               
Cow position:
               
chr17:4607452-4607234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
566-680
               

               
Cow position:
               
chr17:9850461-9850575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
566-762
               

               
Cow position:
               
chr17:40276949-40276755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
567-764
               

               
Cow position:
               
chr17:2275673-2275483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
568-737
               

               
Cow position:
               
chr17:4611855-4612023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
568-772
               

               
Cow position:
               
chr17:950182-949980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
570-757
               

               
Cow position:
               
chr17:5720082-5719891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
571-742
               

               
Cow position:
               
chr17:27303768-27303933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
571-763
               

               
Cow position:
               
chr17:21489422-21489609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
571-772
               

               
Cow position:
               
chr17:18860536-18860716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
571-778
               

               
Cow position:
               
chr17:24077599-24077406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
572-687
               

               
Cow position:
               
chr17:31985738-31985851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
572-703
               

               
Cow position:
               
chr17:8660399-8660269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
572-761
               

               
Cow position:
               
chr17:14248811-14248994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
572-762
               

               
Cow position:
               
chr17:18766782-18766982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
572-766
               

               
Cow position:
               
chr17:37129415-37129210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 187
               

               
Conread position:
               
572-775
               

               
Cow position:
               
chr17:45882105-45881907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
573-743
               

               
Cow position:
               
chr17:3291270-3291106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
573-766
               

               
Cow position:
               
chr17:9940904-9940702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
574-740
               

               
Cow position:
               
chr17:21323696-21323533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
576-766
               

               
Cow position:
               
chr17:1492948-1493139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
577-761
               

               
Cow position:
               
chr17:26120047-26119858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 95
               

               
Conread position:
               
578-766
               

               
Cow position:
               
chr17:18108890-18109074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
579-735
               

               
Cow position:
               
chr17:969080-968926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
595-768
               

               
Cow position:
               
chr17:12342302-12342472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
595-778
               

               
Cow position:
               
chr17:25930358-25930538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
597-768
               

               
Cow position:
               
chr17:8544479-8544313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
597-773
               

               
Cow position:
               
chr17:5573830-5574006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
599-772
               

               
Cow position:
               
chr17:12880772-12880599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
600-737
               

               
Cow position:
               
chr17:35541993-35542130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
600-744
               

               
Cow position:
               
chr17:1875869-1876010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
600-748
               

               
Cow position:
               
chr17:9713165-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
600-749
               

               
Cow position:
               
chr17:5743114-5743263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
600-758
               

               
Cow position:
               
chr17:25193352-25193508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
600-760
               

               
Cow position:
               
chr17:8079489-8079329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
600-764
               

               
Cow position:
               
chr17:36500980-36500815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
600-766
               

               
Cow position:
               
chr17:21922456-21922623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
600-766
               

               
Cow position:
               
chr17:28814315-28814482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
600-768
               

               
Cow position:
               
chr17:27202871-27203038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
600-778
               

               
Cow position:
               
chr17:20874572-20874398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
600-778
               

               
Cow position:
               
chr17:39715334-39715159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
601-764
               

               
Cow position:
               
chr17:32273511-32273675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
603-735
               

               
Cow position:
               
chr17:25159674-25159802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
603-770
               

               
Cow position:
               
chr17:37481900-37482063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
603-774
               

               
Cow position:
               
chr17:25718278-25718109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
605-755
               

               
Cow position:
               
chr17:37430331-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
605-756
               

               
Cow position:
               
chr17:41666313-41666162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
605-766
               

               
Cow position:
               
chr17:21335521-21335681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
606-734
               

               
Cow position:
               
chr17:15301153-15301279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
606-766
               

               
Cow position:
               
chr17:9911928-9911771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
606-778
               

               
Cow position:
               
chr17:4683516-4683348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
607-730
               

               
Cow position:
               
chr17:42346849-42346972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
607-759
               

               
Cow position:
               
chr17:38990276-38990116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
611-764
               

               
Cow position:
               
chr17:35334261-35334108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
611-768
               

               
Cow position:
               
chr17:30718254-30718408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
611-772
               

               
Cow position:
               
chr17:21680945-21680778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
612-764
               

               
Cow position:
               
chr17:25796172-25796324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
612-766
               

               
Cow position:
               
chr17:26730448-26730601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
612-766
               

               
Cow position:
               
chr17:27048320-27048167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
614-762
               

               
Cow position:
               
chr17:38263326-38263475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
614-778
               

               
Cow position:
               
chr17:34836334-34836171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
616-763
               

               
Cow position:
               
chr17:43141548-43141695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
618-778
               

               
Cow position:
               
chr17:25032323-25032481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
619-760
               

               
Cow position:
               
chr17:3067701-3067842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
621-771
               

               
Cow position:
               
chr17:21757985-21758135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
623-742
               

               
Cow position:
               
chr17:7675001-7675120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
648-778
               

               
Cow position:
               
chr17:23798410-23798281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
653-768
               

               
Cow position:
               
chr17:22246113-22245998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.