Cow genome map
| Conread name: | Ova1-OVRM10029H02 |
| Conread position: | 39-321 |
| Cow position: | chr10:19494615-19494327 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 92, 153 |
| Conread position: | 41-594 |
| Cow position: | chr10:39039642-39039108 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 286 |
| Conread position: | 41-619 |
| Cow position: | chr10:22102907-22103465 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 183 |
| Conread position: | 41-734 |
| Cow position: | chr10:23409576-23408910 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 287 |
| Conread position: | 41-786 |
| Cow position: | chr10:1379170-1379894 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 286 |
| Conread position: | 41-786 |
| Cow position: | chr10:29844985-29844275 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 253 |
| Conread position: | 41-786 |
| Cow position: | chr10:37771558-37772288 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 165 |
| Conread position: | 44-245 |
| Cow position: | chr10:40150519-40150318 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 44-274 |
| Cow position: | chr10:38176643-38176869 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 44-316 |
| Cow position: | chr10:34909182-34909455 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 44-322 |
| Cow position: | chr10:10242609-10242885 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 87, 122 |
| Conread position: | 44-328 |
| Cow position: | chr10:3521140-3520853 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 132 |
| Conread position: | 44-460 |
| Cow position: | chr10:31539809-31540197 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 285 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 44-607 |
| Cow position: | chr10:33870962-33871508 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 222 |
| Conread position: | 44-755 |
| Cow position: | chr10:19705949-19705264 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 249 |
| Conread position: | 44-766 |
| Cow position: | chr10:55025254-55025961 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 44-786 |
| Cow position: | chr10:41387308-41386585 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 231 |
| Conread position: | 44-786 |
| Cow position: | chr10:41878601-41879332 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 267 |
| Conread position: | 44-786 |
| Cow position: | chr10:64220775-64220066 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 45-786 |
| Cow position: | chr10:7896804-7896086 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 243 |
| Conread position: | 45-786 |
| Cow position: | chr10:39814721-39813999 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 181 |
| Conread position: | 47-335 |
| Cow position: | chr10:29109306-29109014 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 72, 265 |
| Conread position: | 50-230 |
| Cow position: | chr10:17957912-17957730 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-319 |
| Cow position: | chr10:16478423-16478690 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 81, 142 |
| Conread position: | 50-693 |
| Cow position: | chr10:6556216-6556838 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 108 |
| Conread position: | 50-784 |
| Cow position: | chr10:40418814-40419508 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 95 |
| Conread position: | 50-786 |
| Cow position: | chr10:19841362-19842082 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-786 |
| Cow position: | chr10:34666057-34665340 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 50-786 |
| Cow position: | chr10:41159096-41159817 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-786 |
| Cow position: | chr10:57555652-57554943 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 187 |
| Conread position: | 55-464 |
| Cow position: | chr10:10172423-10172826 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 255 |
| Conread position: | 55-784 |
| Cow position: | chr10:57525648-57524959 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 139 |
| Conread position: | 55-786 |
| Cow position: | chr10:39209440-39210156 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 55-786 |
| Cow position: | chr10:51781753-51781045 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 109 |
| Conread position: | 67-311 |
| Cow position: | chr10:29722351-29722105 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 67-786 |
| Cow position: | chr10:40641644-40642336 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 67-786 |
| Cow position: | chr10:48375752-48375051 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 68-786 |
| Cow position: | chr10:49186787-49186098 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 64 |
| Conread position: | 70-612 |
| Cow position: | chr10:19543702-19543175 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 369 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 125-318 |
| Cow position: | chr10:42737958-42738157 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.