Cow genome map


           Conread name:
           Ova1-OVRM10029H02
        

               Conread position:
               5-649
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 197
               

               Conread position:
               41-463
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 252
               

               Conread position:
               41-592
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 174
               

               Conread position:
               41-777
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 286
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 291
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               519, 250
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 183
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 290
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 254
               

               Conread position:
               41-786
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 229
               

               Conread position:
               42-786
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 220
               

               Conread position:
               44-290
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               44-290
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               75, 161
               

               Conread position:
               44-311
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 112
               

               Conread position:
               44-319
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               44-402
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               44-636
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 283
               

               Conread position:
               44-662
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               44-764
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 145
               

               Conread position:
               44-786
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 191
               

               Conread position:
               45-786
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 429
               

               Conread position:
               45-786
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 250
               

               Conread position:
               47-271
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               48-676
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               50-201
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               50-207
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               50-373
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               50-464
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 239
               

               Conread position:
               50-464
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 277
               

               Conread position:
               50-559
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 277
               

               Conread position:
               50-757
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 358
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 277
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 286
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 277
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 244
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 277
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 134
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 276
               

               Conread position:
               50-786
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 78
               

               Conread position:
               55-332
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               55-786
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 232
               

               Conread position:
               61-559
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               62-388
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 249
               

               Conread position:
               69-447
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               160-591
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               224, 133
               

               Conread position:
               353-786
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 41
               

               Conread position:
               400-786
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 46
               
Show alignments to all cow chromosomes.