Cow genome map
| Conread name: | Ova1-OVRM10029H02 |
| Conread position: | 5-649 |
| Cow position: | chr3:71141314-71140715 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 197 |
| Conread position: | 41-463 |
| Cow position: | chr3:53517135-53517541 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 252 |
| Conread position: | 41-592 |
| Cow position: | chr3:5993562-5993011 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 174 |
| Conread position: | 41-777 |
| Cow position: | chr3:43191766-43191034 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 286 |
| Conread position: | 41-786 |
| Cow position: | chr3:2709344-2708619 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 291 |
| Conread position: | 41-786 |
| Cow position: | chr3:23206348-23205633 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 519, 250 |
| Conread position: | 41-786 |
| Cow position: | chr3:24444575-24443849 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 183 |
| Conread position: | 41-786 |
| Cow position: | chr3:38868113-38868830 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 290 |
| Conread position: | 41-786 |
| Cow position: | chr3:49136040-49135312 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 254 |
| Conread position: | 41-786 |
| Cow position: | chr3:66621722-66622464 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 229 |
| Conread position: | 42-786 |
| Cow position: | chr3:4287612-4288330 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 220 |
| Conread position: | 44-290 |
| Cow position: | chr3:15188338-15188586 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 44-290 |
| Cow position: | chr3:64356437-64356181 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 75, 161 |
| Conread position: | 44-311 |
| Cow position: | chr3:78908459-78908199 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 112 |
| Conread position: | 44-319 |
| Cow position: | chr3:69501091-69500805 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 87, 102 |
| Conread position: | 44-402 |
| Cow position: | chr3:4736396-4736060 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 75, 137 |
| Conread position: | 44-636 |
| Cow position: | chr3:44925591-44926164 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 283 |
| Conread position: | 44-662 |
| Cow position: | chr3:21028089-21027507 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 44-764 |
| Cow position: | chr3:6783897-6784633 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 145 |
| Conread position: | 44-786 |
| Cow position: | chr3:68872226-68871504 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 191 |
| Conread position: | 45-786 |
| Cow position: | chr3:19799650-19798907 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 429 |
| Conread position: | 45-786 |
| Cow position: | chr3:36862929-36862209 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 250 |
| Conread position: | 47-271 |
| Cow position: | chr3:67769340-67769559 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 48-676 |
| Cow position: | chr3:19720127-19719520 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 137 |
| Conread position: | 50-201 |
| Cow position: | chr3:1742866-1743019 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-207 |
| Cow position: | chr3:45034274-45034433 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-373 |
| Cow position: | chr3:2918999-2919327 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 50-464 |
| Cow position: | chr3:54291047-54290652 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 239 |
| Conread position: | 50-464 |
| Cow position: | chr3:56295720-56296122 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-559 |
| Cow position: | chr3:58784621-58784131 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-757 |
| Cow position: | chr3:3524546-3525262 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 358 |
| Conread position: | 50-786 |
| Cow position: | chr3:2870323-2871042 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-786 |
| Cow position: | chr3:18860952-18861688 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 286 |
| Conread position: | 50-786 |
| Cow position: | chr3:29329755-29329037 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-786 |
| Cow position: | chr3:29575589-29574869 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 244 |
| Conread position: | 50-786 |
| Cow position: | chr3:34505818-34505101 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-786 |
| Cow position: | chr3:37970581-37971300 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 134 |
| Conread position: | 50-786 |
| Cow position: | chr3:64026603-64025885 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 276 |
| Conread position: | 50-786 |
| Cow position: | chr3:68891036-68890323 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 78 |
| Conread position: | 55-332 |
| Cow position: | chr3:77444943-77445215 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 55-786 |
| Cow position: | chr3:16224425-16225136 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 232 |
| Conread position: | 61-559 |
| Cow position: | chr3:24644760-24645234 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 62-388 |
| Cow position: | chr3:51857144-51856814 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 249 |
| Conread position: | 69-447 |
| Cow position: | chr3:64823873-64824241 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 160-591 |
| Cow position: | chr3:54740713-54740305 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 224, 133 |
| Conread position: | 353-786 |
| Cow position: | chr3:19590889-19590461 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 41 |
| Conread position: | 400-786 |
| Cow position: | chr3:13724847-13724469 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 46 |
Show alignments to all cow chromosomes.