Cow genome map
| Conread name: | Ova1-OVRM10029H02 |
| Conread position: | 28-593 |
| Cow position: | chr6:68028704-68029251 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 41-427 |
| Cow position: | chr6:24240974-24241344 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 220 |
| Conread position: | 41-786 |
| Cow position: | chr6:16591526-16592265 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 246 |
| Conread position: | 41-786 |
| Cow position: | chr6:41229013-41229737 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 252 |
| Conread position: | 41-786 |
| Cow position: | chr6:44148979-44148261 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 286 |
| Conread position: | 41-786 |
| Cow position: | chr6:51716102-51716835 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 270 |
| Conread position: | 41-786 |
| Cow position: | chr6:51731650-51732374 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 148 |
| Conread position: | 42-228 |
| Cow position: | chr6:25792186-25791999 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 44-222 |
| Cow position: | chr6:24534496-24534672 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 96 |
| Conread position: | 44-260 |
| Cow position: | chr6:43573898-43574113 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 44-317 |
| Cow position: | chr6:35939573-35939850 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 47-784 |
| Cow position: | chr6:30273318-30272600 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 246 |
| Conread position: | 48-736 |
| Cow position: | chr6:27171157-27171826 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 50-296 |
| Cow position: | chr6:45587526-45587775 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-321 |
| Cow position: | chr6:1409803-1409527 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 50-464 |
| Cow position: | chr6:2877105-2876704 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 281 |
| Conread position: | 50-464 |
| Cow position: | chr6:40276661-40277064 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 239 |
| Conread position: | 50-464 |
| Cow position: | chr6:44002250-44002670 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 197 |
| Conread position: | 50-610 |
| Cow position: | chr6:329887-329345 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 243 |
| Conread position: | 50-656 |
| Cow position: | chr6:14390507-14391095 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-661 |
| Cow position: | chr6:40326997-40327584 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 158 |
| Conread position: | 50-754 |
| Cow position: | chr6:43619302-43619996 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-755 |
| Cow position: | chr6:26669284-26668602 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-764 |
| Cow position: | chr6:28703131-28702429 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 244 |
| Conread position: | 50-786 |
| Cow position: | chr6:2376253-2376999 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 361 |
| Conread position: | 50-786 |
| Cow position: | chr6:5749503-5750224 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 277 |
| Conread position: | 50-786 |
| Cow position: | chr6:12664742-12664024 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 273 |
| Conread position: | 50-786 |
| Cow position: | chr6:13309800-13309092 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 81 |
| Conread position: | 50-786 |
| Cow position: | chr6:17596717-17595996 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 276 |
| Conread position: | 50-786 |
| Cow position: | chr6:39910910-39911617 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 143 |
| Conread position: | 51-786 |
| Cow position: | chr6:53543676-53544390 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 260 |
| Conread position: | 53-683 |
| Cow position: | chr6:15891620-15890993 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 55-319 |
| Cow position: | chr6:18985662-18985931 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 55-626 |
| Cow position: | chr6:12627282-12627836 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 56-319 |
| Cow position: | chr6:15478755-15479023 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 56-321 |
| Cow position: | chr6:57684693-57684434 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 163, 47 |
| Conread position: | 61-549 |
| Cow position: | chr6:51878425-51878890 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 255 |
| Conread position: | 62-201 |
| Cow position: | chr6:65820380-65820238 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 62-255 |
| Cow position: | chr6:40379040-40378846 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 62-323 |
| Cow position: | chr6:67213684-67213422 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 233 |
| Conread position: | 62-710 |
| Cow position: | chr6:62663307-62663931 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 216 |
| Conread position: | 66-781 |
| Cow position: | chr6:39955441-39956135 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 124 |
| Conread position: | 67-464 |
| Cow position: | chr6:28642943-28642558 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 260 |
Show alignments to all cow chromosomes.